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The map label for this gene is 119386113

Identifier: 119386113

GI number: 119386113

Start: 545967

End: 546131

Strand: Direct

Name: 119386113

Synonym: Pden_3401

Alternate gene names: NA

Gene position: 545967-546131 (Clockwise)

Preceding gene: 119386111

Following gene: 119386116

Centisome position: 31.56

GC content: 63.64

Gene sequence:

>165_bases
ATGGATCGCACCCTCTACCGGCTGCGCAACCTCGTCGAGCGCTGCTGCAACAAGCCGAGGCACGCCCGCCGCGTCGCAAC
CCGCCATGGCAAGACCGCCGAAAGCTTCCTGGACTTCATCGACATGACCTCGATCCGCCTCTGGCTCCGCCATTCGTCAA
CATGA

Upstream 100 bases:

>100_bases
CGGATCGCGGCCATGACTCCGACAACGTTCGCAAAGCCATGGAGGCGCACAACGTGGTGCCCGTCATCCCGATGCGCAAG
ACCCGCAAGTGCGCGTGGCG

Downstream 100 bases:

>100_bases
CCTGGGGGCGAGTTTCAGGCAAGGTTCGCGTCACGTCCGGTCAGGCCCACCGGCGGCACAGCACCAGTTTCGCCGCAAGC
CCCTGATCGGCCCGGAAGAA

Product: transposase, IS4

Products: NA

Alternate protein names: ISCc1 Transposase OrfB; Transposase; IS4 Family Transposase; Conserved Domain Protein

Number of amino acids: Translated: 54; Mature: 54

Protein sequence:

>54_residues
MDRTLYRLRNLVERCCNKPRHARRVATRHGKTAESFLDFIDMTSIRLWLRHSST

Sequences:

>Translated_54_residues
MDRTLYRLRNLVERCCNKPRHARRVATRHGKTAESFLDFIDMTSIRLWLRHSST
>Mature_54_residues
MDRTLYRLRNLVERCCNKPRHARRVATRHGKTAESFLDFIDMTSIRLWLRHSST

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 6517; Mature: 6517

Theoretical pI: Translated: 11.66; Mature: 11.66

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.7 %Cys     (Translated Protein)
3.7 %Met     (Translated Protein)
7.4 %Cys+Met (Translated Protein)
3.7 %Cys     (Mature Protein)
3.7 %Met     (Mature Protein)
7.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDRTLYRLRNLVERCCNKPRHARRVATRHGKTAESFLDFIDMTSIRLWLRHSST
CCHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure
MDRTLYRLRNLVERCCNKPRHARRVATRHGKTAESFLDFIDMTSIRLWLRHSST
CCHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA