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The map label for this gene is 119386087

Identifier: 119386087

GI number: 119386087

Start: 521222

End: 521788

Strand: Direct

Name: 119386087

Synonym: Pden_3373

Alternate gene names: NA

Gene position: 521222-521788 (Clockwise)

Preceding gene: 119386086

Following gene: 119386088

Centisome position: 30.13

GC content: 70.55

Gene sequence:

>567_bases
ATGACCCGCAGAAACCGCATCACCTATCTCGCCGCAACCGCTCTCGCGGTTCTGGTGATCGGCGGCATCTCCGTCACCGA
GATCGCGCCCCGGCTGATCTGGAATGCTTCCGCCAGCCTGCCGCTCGGGCTCTATCGCGTAGAGCCGCCGATCAACCTCG
CCCTCGGCGATCTGGTCGCGGTCACGCCGCCCGAACCTCTGGCGCAGTTCGTCACCGCGCGCGGCTATATCGGCCCCGGC
GTGCCGCTGCTGAAGCGCGTCGCCGCGCTTCCCGGCACGCGGGTCTGCCGCGAGGAAACCACGATCACCGTCGACAGCCA
GGCCGTCGGCGAGGCGCGCGAACGCGACAGCCTCGGCCGGCCGCTGCCCGTCTGGCGGGGCTGCCGGCTGATCGTCGGGG
GAGAGATCTTTCTCATGAACCGGGACGTCGGGGACAGTCTCGACGGCCGCTATTTCGGCCCGCTCCCGCTCGGCAGCGTC
ACCGCCCGCATCGTCCCGCTCTGGACCGATACGGCGGGCGACGGCCGCTTTCGCCGGCCCGCAATTGGGGCGGAAAGCGG
CCTCTGA

Upstream 100 bases:

>100_bases
ACAGTCCGACCATGAGCACAGTCGCAGGTGATGCCGCGACCGACGGCGATGCAGTCGGCAACGCGCCCACCGACAATCCT
GCGGACCACGGAGGCGCGTC

Downstream 100 bases:

>100_bases
TCCCACTACCAACCATCAAGCGAAGGATATACACGATGCCACAGATCGGAGAATTCACCCGCACGCAATCGGGCTACGAG
GGCCGCATCCGTACCGTCAC

Product: conjugal transfer protein precursor

Products: NA

Alternate protein names: Conjugal Transfer Protein TraF; TraF Peptidase; Conjugal Transfer TRAF Transmembrane Protein; Peptidase; Type IV Secretory Pathway Protease TraF-Like Protein; Conjugative Transfer Signal Peptidase TraF; Plasmid Transfer Protein TraF; Type IV Secretory Pathway Protease TraF; Peptidase S; Raf Peptidase. Serine Peptidase. Merops Family; Conjugal Transfer Protein Traf; Conjugal Transfer TraF Transmembrane Protein; Plasmid Transfer Protein Traf; Traf Peptidase Serine Peptidase Merops Family; Transmembrane Anchor Conjugal Transfer Protein; RaF Peptidase. Serine Peptidase. MEROPS Family; TraF Peptidase Serine Peptidase MEROPS Family

Number of amino acids: Translated: 188; Mature: 187

Protein sequence:

>188_residues
MTRRNRITYLAATALAVLVIGGISVTEIAPRLIWNASASLPLGLYRVEPPINLALGDLVAVTPPEPLAQFVTARGYIGPG
VPLLKRVAALPGTRVCREETTITVDSQAVGEARERDSLGRPLPVWRGCRLIVGGEIFLMNRDVGDSLDGRYFGPLPLGSV
TARIVPLWTDTAGDGRFRRPAIGAESGL

Sequences:

>Translated_188_residues
MTRRNRITYLAATALAVLVIGGISVTEIAPRLIWNASASLPLGLYRVEPPINLALGDLVAVTPPEPLAQFVTARGYIGPG
VPLLKRVAALPGTRVCREETTITVDSQAVGEARERDSLGRPLPVWRGCRLIVGGEIFLMNRDVGDSLDGRYFGPLPLGSV
TARIVPLWTDTAGDGRFRRPAIGAESGL
>Mature_187_residues
TRRNRITYLAATALAVLVIGGISVTEIAPRLIWNASASLPLGLYRVEPPINLALGDLVAVTPPEPLAQFVTARGYIGPGV
PLLKRVAALPGTRVCREETTITVDSQAVGEARERDSLGRPLPVWRGCRLIVGGEIFLMNRDVGDSLDGRYFGPLPLGSVT
ARIVPLWTDTAGDGRFRRPAIGAESGL

Specific function: Unknown

COG id: COG4959

COG function: function code OU; Type IV secretory pathway, protease TraF

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 20094; Mature: 19962

Theoretical pI: Translated: 9.68; Mature: 9.68

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
1.1 %Met     (Translated Protein)
2.1 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
0.5 %Met     (Mature Protein)
1.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTRRNRITYLAATALAVLVIGGISVTEIAPRLIWNASASLPLGLYRVEPPINLALGDLVA
CCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCCCCEEEEEECCCCCEEECCEEE
VTPPEPLAQFVTARGYIGPGVPLLKRVAALPGTRVCREETTITVDSQAVGEARERDSLGR
ECCCHHHHHHHHHCCCCCCCHHHHHHHHHCCCCCEECCCCEEEECHHHHHHHHHHHCCCC
PLPVWRGCRLIVGGEIFLMNRDVGDSLDGRYFGPLPLGSVTARIVPLWTDTAGDGRFRRP
CCCCCCCCEEEECCEEEEEECCCCCCCCCCEECCCCCCCCEEEEEEEEECCCCCCCCCCC
AIGAESGL
CCCCCCCC
>Mature Secondary Structure 
TRRNRITYLAATALAVLVIGGISVTEIAPRLIWNASASLPLGLYRVEPPINLALGDLVA
CCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCCCCEEEEEECCCCCEEECCEEE
VTPPEPLAQFVTARGYIGPGVPLLKRVAALPGTRVCREETTITVDSQAVGEARERDSLGR
ECCCHHHHHHHHHCCCCCCCHHHHHHHHHCCCCCEECCCCEEEECHHHHHHHHHHHCCCC
PLPVWRGCRLIVGGEIFLMNRDVGDSLDGRYFGPLPLGSVTARIVPLWTDTAGDGRFRRP
CCCCCCCCEEEECCEEEEEECCCCCCCCCCEECCCCCCCCEEEEEEEEECCCCCCCCCCC
AIGAESGL
CCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA