Definition Paracoccus denitrificans PD1222 chromosome 2, complete sequence.
Accession NC_008687
Length 1,730,097

Click here to switch to the map view.

The map label for this gene is 119385993

Identifier: 119385993

GI number: 119385993

Start: 440299

End: 441330

Strand: Direct

Name: 119385993

Synonym: Pden_3274

Alternate gene names: NA

Gene position: 440299-441330 (Clockwise)

Preceding gene: 119385990

Following gene: 119385994

Centisome position: 25.45

GC content: 62.21

Gene sequence:

>1032_bases
ATGATTATCGACTGCCACGGTCATTTCACCACCGTCCCGGGTTATTTCCGCGACTATCGCAATGCCCAGATCGCCGATTT
CAAGGCCGGCAAGACCTCGGATTTCTCGCCCGCCCCGCAAATCTCGGATGAGGAACTGTGCGAAGGGCTGGAGAAGAACC
AGATCCGCCTGCAGAAGGAACGCGGGATCGACATGACGCTGTTTTCGCCCATCGCCGGGCTGATGGGACATCACCACGGC
AATGAGGCGCTGAGCAGGCATTGGTCGCGCACCTGCAACGACCTGATCCATCGGGTCAGCACCCTTTACCCGGACCGGTT
TGTTCCCATCTGCCAGCTGCCGCAGAGCCCGGGCGCAGACCCGCGCGGCTGCATCGAGGAACTGGAGCGTTGCGTCCTCG
AGCTGGGCTTTGTCGGCTGCAACCTCAATCCCGATCCGACCGACGGCTACTGGACCGACCCGCCGGTGACGGACAAATGG
TGGTATCCGCTTTACGAGAAGCTGGTCGAGCTGGACGTGCCGGCCATGATTCACGTCTCGGGCTCGTGCAACCCGAACTT
CCACGGAACGGGGGCGCATTATCTGAACGGCGACACCTCGGTCTTCATGCAGCTTCTGCTGTCGGATCTGTTCAAGGATT
TTCCGACCTTGCGGATGGTAATCCCGCATGGCGGCGGTGCGGTGCCTTACCATTGGGGCCGCTATCGCGGCCTTGCGAAT
GACCTTGGCCGGCCGCCGCTGGCCGAAGCGCTGATGAACAACGTCTTCTTCGACACCTGCGTCTATCACCAGCCAGGCAT
TGATCTGCTGACCGAGGTGATCCCGGTCCGGAACGTACTCTTCGGTTCGGAAATGGTGGGCGCGGTGCGCTCGATCGACC
CCGAGACCGGCCATGCCTTCGACGACACCCGCCGCTATGTCGAGGCGCTGGAGCTTTCGCCCGAGGACCGGCACGCGATC
TTCGAAGGCAATGTGCGCCGCGTCTATCCGCGCCTCGACGCGCGGCTGAAGGCGATGGGAAAAGCGGCATGA

Upstream 100 bases:

>100_bases
CGGCACGAATTCCAATTGGCACCCTGAAGCCCGCCTAGGCTAGGCAGTTGGCAGGGAACGATGACGTTCCACGAACTTCC
CTTTCAGAGGTGCTGCCGAC

Downstream 100 bases:

>100_bases
AGGGGCCGCGCACTGCCGCCCGCATCCTCGTCGACCAGCTGTTGCTGCAAGGTGTGGACCGCGTCTTCTGCGTGCCGGGC
GAAAGCTTCCTCGCCGTTCT

Product: amidohydrolase 2

Products: NA

Alternate protein names: Aminocarboxymuconate-Semialdehyde Decarboxylase; FLDW Protein; LOW QUALITY PROTEIN 4-Oxalomesaconate Hydratase; Amidohydrolase Family

Number of amino acids: Translated: 343; Mature: 343

Protein sequence:

>343_residues
MIIDCHGHFTTVPGYFRDYRNAQIADFKAGKTSDFSPAPQISDEELCEGLEKNQIRLQKERGIDMTLFSPIAGLMGHHHG
NEALSRHWSRTCNDLIHRVSTLYPDRFVPICQLPQSPGADPRGCIEELERCVLELGFVGCNLNPDPTDGYWTDPPVTDKW
WYPLYEKLVELDVPAMIHVSGSCNPNFHGTGAHYLNGDTSVFMQLLLSDLFKDFPTLRMVIPHGGGAVPYHWGRYRGLAN
DLGRPPLAEALMNNVFFDTCVYHQPGIDLLTEVIPVRNVLFGSEMVGAVRSIDPETGHAFDDTRRYVEALELSPEDRHAI
FEGNVRRVYPRLDARLKAMGKAA

Sequences:

>Translated_343_residues
MIIDCHGHFTTVPGYFRDYRNAQIADFKAGKTSDFSPAPQISDEELCEGLEKNQIRLQKERGIDMTLFSPIAGLMGHHHG
NEALSRHWSRTCNDLIHRVSTLYPDRFVPICQLPQSPGADPRGCIEELERCVLELGFVGCNLNPDPTDGYWTDPPVTDKW
WYPLYEKLVELDVPAMIHVSGSCNPNFHGTGAHYLNGDTSVFMQLLLSDLFKDFPTLRMVIPHGGGAVPYHWGRYRGLAN
DLGRPPLAEALMNNVFFDTCVYHQPGIDLLTEVIPVRNVLFGSEMVGAVRSIDPETGHAFDDTRRYVEALELSPEDRHAI
FEGNVRRVYPRLDARLKAMGKAA
>Mature_343_residues
MIIDCHGHFTTVPGYFRDYRNAQIADFKAGKTSDFSPAPQISDEELCEGLEKNQIRLQKERGIDMTLFSPIAGLMGHHHG
NEALSRHWSRTCNDLIHRVSTLYPDRFVPICQLPQSPGADPRGCIEELERCVLELGFVGCNLNPDPTDGYWTDPPVTDKW
WYPLYEKLVELDVPAMIHVSGSCNPNFHGTGAHYLNGDTSVFMQLLLSDLFKDFPTLRMVIPHGGGAVPYHWGRYRGLAN
DLGRPPLAEALMNNVFFDTCVYHQPGIDLLTEVIPVRNVLFGSEMVGAVRSIDPETGHAFDDTRRYVEALELSPEDRHAI
FEGNVRRVYPRLDARLKAMGKAA

Specific function: Unknown

COG id: COG2159

COG function: function code R; Predicted metal-dependent hydrolase of the TIM-barrel fold

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 38578; Mature: 38578

Theoretical pI: Translated: 5.83; Mature: 5.83

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.6 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
5.2 %Cys+Met (Translated Protein)
2.6 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
5.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIIDCHGHFTTVPGYFRDYRNAQIADFKAGKTSDFSPAPQISDEELCEGLEKNQIRLQKE
CEEECCCCCCCCCHHHHHHCCCEEEECCCCCCCCCCCCCCCCHHHHHCCHHHHHHHHHHH
RGIDMTLFSPIAGLMGHHHGNEALSRHWSRTCNDLIHRVSTLYPDRFVPICQLPQSPGAD
CCCCEEHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHCCCCCCCCC
PRGCIEELERCVLELGFVGCNLNPDPTDGYWTDPPVTDKWWYPLYEKLVELDVPAMIHVS
HHHHHHHHHHHHHHHHHEECCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCEEEEEC
GSCNPNFHGTGAHYLNGDTSVFMQLLLSDLFKDFPTLRMVIPHGGGAVPYHWGRYRGLAN
CCCCCCCCCCCCCEECCCHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCHHHHCHHH
DLGRPPLAEALMNNVFFDTCVYHQPGIDLLTEVIPVRNVLFGSEMVGAVRSIDPETGHAF
HCCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCH
DDTRRYVEALELSPEDRHAIFEGNVRRVYPRLDARLKAMGKAA
HHHHHHHHHHHCCCCCCCEEECCCHHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure
MIIDCHGHFTTVPGYFRDYRNAQIADFKAGKTSDFSPAPQISDEELCEGLEKNQIRLQKE
CEEECCCCCCCCCHHHHHHCCCEEEECCCCCCCCCCCCCCCCHHHHHCCHHHHHHHHHHH
RGIDMTLFSPIAGLMGHHHGNEALSRHWSRTCNDLIHRVSTLYPDRFVPICQLPQSPGAD
CCCCEEHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHCCCCCCCCC
PRGCIEELERCVLELGFVGCNLNPDPTDGYWTDPPVTDKWWYPLYEKLVELDVPAMIHVS
HHHHHHHHHHHHHHHHHEECCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCEEEEEC
GSCNPNFHGTGAHYLNGDTSVFMQLLLSDLFKDFPTLRMVIPHGGGAVPYHWGRYRGLAN
CCCCCCCCCCCCCEECCCHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCHHHHCHHH
DLGRPPLAEALMNNVFFDTCVYHQPGIDLLTEVIPVRNVLFGSEMVGAVRSIDPETGHAF
HCCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCH
DDTRRYVEALELSPEDRHAIFEGNVRRVYPRLDARLKAMGKAA
HHHHHHHHHHHCCCCCCCEEECCCHHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA