| Definition | Paracoccus denitrificans PD1222 chromosome 2, complete sequence. |
|---|---|
| Accession | NC_008687 |
| Length | 1,730,097 |
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The map label for this gene is yccK [H]
Identifier: 119385964
GI number: 119385964
Start: 407264
End: 408247
Strand: Direct
Name: yccK [H]
Synonym: Pden_3242
Alternate gene names: 119385964
Gene position: 407264-408247 (Clockwise)
Preceding gene: 119385963
Following gene: 119385965
Centisome position: 23.54
GC content: 61.08
Gene sequence:
>984_bases ATGAAAACAAGGAGGCTTGGAAGCAGCGGGCTGGAAGTCTCGGCGCTCGGTCTCGGCTGCATGGGCCTGAGCTATGGATA TGGACAGGCCACCGGGCACGGTGATGCAATTCGTCTCATTCGCACCGCCCATGCCCGTGGTGTCACCTTTTTCGACACCG CCGAGGCTTATGGGCCTGGTCTCAATGAGGAGATTATAGGAGAGGCGCTGCAACCCGTTCGCGAGCATGTGGTGATCGCC ACGAAGTTCGGCTTCAGGGACGGTGTGCCAGCGAACGGTCTCGACAGCCGCCCCGAGCGCATCCGCCACGTCGCAGATGC GGCTTTGAAACGCCTCCGGACCGATCATATCGACATCTTCTACCAGCATCGCGTCGACCCGAACGTGCCCATCGAAGATG TGGCAGGCACGGTCAGGGACCTCATCCATGAAGGCAAGGTGCGTCACTTCGGATTGTGTGAGGCTGGCGCCGACACGATC CGCCGTGCGCAGGCGGTGCAGCCTCTGGCAGCCTTGCAAAGCGAATATTCCATGTGGTGGCGGGAACCGGAGACCGAAAT CCTTCCGCTTCTCGATGAGCTTGGTATCGGCTTTGTGCCGTTCGCACCGCTCGGCAAAGGATTTCTGACAGGCAAGATCG ACCAGAACGCCACCTTTGCGAAAGACGACTTTCGGGCATCCGTGCCGCGTTTCTCGCCCGAGGCGCTCAAGGCAAATCAG GCGCTCGTCGACGTCATCGCGTCAATCGCTTCGGACAAGAACGTGACGCCCGCGCAGATCGCGCTGGCATGGTTGCTTGG CCAGCGACCCTATATCGTCCCGATTCCCGGCACCACCAAGCTGAATCGGCTGGACGAGAACATTGGAGCGGCAACTGTCG CGCTGTCTTCTGACGAGATGGCGCTGATCGGCCAGTCGCTCGACGCCATCGCCGTGCGGGGCGACCGCTATCCGGCATCC CACCAGCAATTCGTCAACCGCTGA
Upstream 100 bases:
>100_bases CGATCAGGAACGGCGCACGCTGGAGCGGGTGACGGACTGGCTTGGGCAACGATGAGAAATCGCGCCGCAGGTCTCTGCGG TGCAATGATGGAGAAAGACG
Downstream 100 bases:
>100_bases GGGCGCGCCGTTCAGACGCGACCTCTCCCGAACACAAGGACAACAGACATGACAAACGAACAGAAACTGAAGATCGGGCG GCGGGGTTTCCTGGGTGCGG
Product: aldo/keto reductase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 327; Mature: 327
Protein sequence:
>327_residues MKTRRLGSSGLEVSALGLGCMGLSYGYGQATGHGDAIRLIRTAHARGVTFFDTAEAYGPGLNEEIIGEALQPVREHVVIA TKFGFRDGVPANGLDSRPERIRHVADAALKRLRTDHIDIFYQHRVDPNVPIEDVAGTVRDLIHEGKVRHFGLCEAGADTI RRAQAVQPLAALQSEYSMWWREPETEILPLLDELGIGFVPFAPLGKGFLTGKIDQNATFAKDDFRASVPRFSPEALKANQ ALVDVIASIASDKNVTPAQIALAWLLGQRPYIVPIPGTTKLNRLDENIGAATVALSSDEMALIGQSLDAIAVRGDRYPAS HQQFVNR
Sequences:
>Translated_327_residues MKTRRLGSSGLEVSALGLGCMGLSYGYGQATGHGDAIRLIRTAHARGVTFFDTAEAYGPGLNEEIIGEALQPVREHVVIA TKFGFRDGVPANGLDSRPERIRHVADAALKRLRTDHIDIFYQHRVDPNVPIEDVAGTVRDLIHEGKVRHFGLCEAGADTI RRAQAVQPLAALQSEYSMWWREPETEILPLLDELGIGFVPFAPLGKGFLTGKIDQNATFAKDDFRASVPRFSPEALKANQ ALVDVIASIASDKNVTPAQIALAWLLGQRPYIVPIPGTTKLNRLDENIGAATVALSSDEMALIGQSLDAIAVRGDRYPAS HQQFVNR >Mature_327_residues MKTRRLGSSGLEVSALGLGCMGLSYGYGQATGHGDAIRLIRTAHARGVTFFDTAEAYGPGLNEEIIGEALQPVREHVVIA TKFGFRDGVPANGLDSRPERIRHVADAALKRLRTDHIDIFYQHRVDPNVPIEDVAGTVRDLIHEGKVRHFGLCEAGADTI RRAQAVQPLAALQSEYSMWWREPETEILPLLDELGIGFVPFAPLGKGFLTGKIDQNATFAKDDFRASVPRFSPEALKANQ ALVDVIASIASDKNVTPAQIALAWLLGQRPYIVPIPGTTKLNRLDENIGAATVALSSDEMALIGQSLDAIAVRGDRYPAS HQQFVNR
Specific function: Unknown
COG id: COG0667
COG function: function code C; Predicted oxidoreductases (related to aryl-alcohol dehydrogenases)
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the aldo/keto reductase 2 family [H]
Homologues:
Organism=Homo sapiens, GI27436969, Length=318, Percent_Identity=30.5031446540881, Blast_Score=120, Evalue=1e-27, Organism=Homo sapiens, GI4504825, Length=315, Percent_Identity=30.4761904761905, Blast_Score=120, Evalue=2e-27, Organism=Homo sapiens, GI27436971, Length=310, Percent_Identity=30.3225806451613, Blast_Score=117, Evalue=2e-26, Organism=Homo sapiens, GI27436964, Length=307, Percent_Identity=29.3159609120521, Blast_Score=116, Evalue=3e-26, Organism=Homo sapiens, GI27436962, Length=307, Percent_Identity=28.9902280130293, Blast_Score=113, Evalue=2e-25, Organism=Homo sapiens, GI27436966, Length=307, Percent_Identity=28.9902280130293, Blast_Score=113, Evalue=2e-25, Organism=Homo sapiens, GI223718702, Length=195, Percent_Identity=31.2820512820513, Blast_Score=79, Evalue=6e-15, Organism=Homo sapiens, GI41327764, Length=195, Percent_Identity=30.7692307692308, Blast_Score=76, Evalue=4e-14, Organism=Homo sapiens, GI41152114, Length=176, Percent_Identity=31.8181818181818, Blast_Score=76, Evalue=4e-14, Organism=Escherichia coli, GI87081735, Length=316, Percent_Identity=32.9113924050633, Blast_Score=153, Evalue=1e-38, Organism=Escherichia coli, GI1788070, Length=329, Percent_Identity=31.6109422492401, Blast_Score=131, Evalue=5e-32, Organism=Escherichia coli, GI1789375, Length=325, Percent_Identity=28.9230769230769, Blast_Score=122, Evalue=2e-29, Organism=Escherichia coli, GI1787674, Length=308, Percent_Identity=30.1948051948052, Blast_Score=107, Evalue=7e-25, Organism=Escherichia coli, GI1789199, Length=348, Percent_Identity=28.448275862069, Blast_Score=93, Evalue=3e-20, Organism=Escherichia coli, GI1788081, Length=274, Percent_Identity=24.8175182481752, Blast_Score=84, Evalue=1e-17, Organism=Escherichia coli, GI48994888, Length=270, Percent_Identity=28.5185185185185, Blast_Score=67, Evalue=2e-12, Organism=Saccharomyces cerevisiae, GI6325169, Length=340, Percent_Identity=28.2352941176471, Blast_Score=127, Evalue=3e-30, Organism=Saccharomyces cerevisiae, GI6325384, Length=333, Percent_Identity=27.027027027027, Blast_Score=100, Evalue=5e-22, Organism=Saccharomyces cerevisiae, GI6323998, Length=317, Percent_Identity=25.8675078864353, Blast_Score=91, Evalue=3e-19, Organism=Saccharomyces cerevisiae, GI6319958, Length=286, Percent_Identity=24.8251748251748, Blast_Score=87, Evalue=5e-18, Organism=Saccharomyces cerevisiae, GI6319951, Length=316, Percent_Identity=25.6329113924051, Blast_Score=86, Evalue=1e-17, Organism=Saccharomyces cerevisiae, GI6322615, Length=251, Percent_Identity=24.7011952191235, Blast_Score=77, Evalue=5e-15, Organism=Drosophila melanogaster, GI24640980, Length=347, Percent_Identity=25.0720461095101, Blast_Score=91, Evalue=1e-18, Organism=Drosophila melanogaster, GI45549126, Length=347, Percent_Identity=25.0720461095101, Blast_Score=90, Evalue=2e-18, Organism=Drosophila melanogaster, GI24646159, Length=314, Percent_Identity=26.1146496815287, Blast_Score=82, Evalue=7e-16, Organism=Drosophila melanogaster, GI24646155, Length=157, Percent_Identity=32.484076433121, Blast_Score=78, Evalue=9e-15,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001395 - InterPro: IPR020471 - InterPro: IPR023210 [H]
Pfam domain/function: PF00248 Aldo_ket_red [H]
EC number: 1.-.-.- [C]
Molecular weight: Translated: 35552; Mature: 35552
Theoretical pI: Translated: 6.61; Mature: 6.61
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 1.8 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 1.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKTRRLGSSGLEVSALGLGCMGLSYGYGQATGHGDAIRLIRTAHARGVTFFDTAEAYGPG CCCCCCCCCCCEEEEHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHCCCEEEECHHHHCCC LNEEIIGEALQPVREHVVIATKFGFRDGVPANGLDSRPERIRHVADAALKRLRTDHIDIF CCHHHHHHHHHHHHHHEEEEEECCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCHHEEEE YQHRVDPNVPIEDVAGTVRDLIHEGKVRHFGLCEAGADTIRRAQAVQPLAALQSEYSMWW EEECCCCCCCHHHHHHHHHHHHHCCCCCEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHH REPETEILPLLDELGIGFVPFAPLGKGFLTGKIDQNATFAKDDFRASVPRFSPEALKANQ CCCCHHHHHHHHHCCCCCCCCCCCCCCCEEECCCCCCCCCCHHHHHCCCCCCHHHHHHHH ALVDVIASIASDKNVTPAQIALAWLLGQRPYIVPIPGTTKLNRLDENIGAATVALSSDEM HHHHHHHHHHCCCCCCHHHHHHHHHHCCCCEEEECCCCCHHHHHHHCCCEEEEEECCCCH ALIGQSLDAIAVRGDRYPASHQQFVNR HHHHCCCCEEEEECCCCCCHHHHHHCC >Mature Secondary Structure MKTRRLGSSGLEVSALGLGCMGLSYGYGQATGHGDAIRLIRTAHARGVTFFDTAEAYGPG CCCCCCCCCCCEEEEHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHCCCEEEECHHHHCCC LNEEIIGEALQPVREHVVIATKFGFRDGVPANGLDSRPERIRHVADAALKRLRTDHIDIF CCHHHHHHHHHHHHHHEEEEEECCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCHHEEEE YQHRVDPNVPIEDVAGTVRDLIHEGKVRHFGLCEAGADTIRRAQAVQPLAALQSEYSMWW EEECCCCCCCHHHHHHHHHHHHHCCCCCEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHH REPETEILPLLDELGIGFVPFAPLGKGFLTGKIDQNATFAKDDFRASVPRFSPEALKANQ CCCCHHHHHHHHHCCCCCCCCCCCCCCCEEECCCCCCCCCCHHHHHCCCCCCHHHHHHHH ALVDVIASIASDKNVTPAQIALAWLLGQRPYIVPIPGTTKLNRLDENIGAATVALSSDEM HHHHHHHHHHCCCCCCHHHHHHHHHHCCCCEEEECCCCCHHHHHHHCCCEEEEEECCCCH ALIGQSLDAIAVRGDRYPASHQQFVNR HHHHCCCCEEEEECCCCCCHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9274031; 9384377; 9106203 [H]