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The map label for this gene is hupH [H]

Identifier: 119385826

GI number: 119385826

Start: 289051

End: 289884

Strand: Direct

Name: hupH [H]

Synonym: Pden_3104

Alternate gene names: 119385826

Gene position: 289051-289884 (Clockwise)

Preceding gene: 119385825

Following gene: 119385827

Centisome position: 16.71

GC content: 68.82

Gene sequence:

>834_bases
ATGGCCCAGAATTTTCACCTGCCCCCTGTTGGTTTCGGCCCCGGATCGCAGCCCGACGATGGCGAGGGGCTGGAGTGGCT
GCCGCTGCCCTCCGGGATGCGCACCTATGACATGCATCTGCCCGAGGTCGGGAATGTCGCGTCTCTGGCGCCCGCGCTGG
CGATGCTGGCCGAGATCGCCGCGGCCTGCGATCGTGTGGCCCAGGGGGCGGCGCCGGTGTCGTTCGATCTGTCCGCGCTG
GATGCGGCCAACCGGGCGCTGATGGCGGAAACGCTGGGTCAGGGCGAGGTGTCGCTGCGCGCGCGGGGCGTGCCGGCGGT
GGCCGTGCAGGAAAGCGTCTTTGCCGGGGTCTGGGTGCTGAAGGCCGAGGGGATCGACCGGGTCGAGGTCGCGCCCGTGC
CGCAGCTTGCCCTGACGCGGGCGTTCCATGCGCAGCGCCCGGCGATCGGGGCCCTGGCCCCGCGCGCGCCGGGGGTGGTG
AACGCCCCTGCCTTGCTGGCTGAACTGATGGACAAATCCCTGTCCTGGCGTGGCCCCGGTGATCTGCATGTGGTGAACCT
GACCCTGATTCCGCATACCGAAGAGGATCTGCTCTGGCTCGATCAGGCTCTGGGCGAGGGGTCGGTGACCATCCTGTCGC
GCGGCTATGGCAATTGCCGCATCACCGCGACCGCGCAGGATCGTCTGTGGCGGGTGCAGTTCTTCAACTCGATGGATGTG
CTGATCCTCGATACCTTCGAGGTGACCGCCATGCCCGAGGTGGTGCTGGCCGCGCCCGAGGATCTGGCGGACAGCGCGGG
CCGCATTCGTGAAGTGCTGGGGGCGATCCGATGA

Upstream 100 bases:

>100_bases
TGGCTCCTATCTCGGCTCGATCGAGAAGATCCGCGACTGGGACGATTACATCGCCCGCACCAGCCACATCCTCTCGCTGC
CGGGTTGAAAGGCAAAGACA

Downstream 100 bases:

>100_bases
GCGTCGAGACCGCACGGGGCGGGTTCGAGGGGTCTTATCTGGGCGCCAATGACCGGATCAGCCCGCAGGCGATCATGGAA
TGCAAGATCTGCTGGACCAG

Product: HupH hydrogenase expression protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 277; Mature: 276

Protein sequence:

>277_residues
MAQNFHLPPVGFGPGSQPDDGEGLEWLPLPSGMRTYDMHLPEVGNVASLAPALAMLAEIAAACDRVAQGAAPVSFDLSAL
DAANRALMAETLGQGEVSLRARGVPAVAVQESVFAGVWVLKAEGIDRVEVAPVPQLALTRAFHAQRPAIGALAPRAPGVV
NAPALLAELMDKSLSWRGPGDLHVVNLTLIPHTEEDLLWLDQALGEGSVTILSRGYGNCRITATAQDRLWRVQFFNSMDV
LILDTFEVTAMPEVVLAAPEDLADSAGRIREVLGAIR

Sequences:

>Translated_277_residues
MAQNFHLPPVGFGPGSQPDDGEGLEWLPLPSGMRTYDMHLPEVGNVASLAPALAMLAEIAAACDRVAQGAAPVSFDLSAL
DAANRALMAETLGQGEVSLRARGVPAVAVQESVFAGVWVLKAEGIDRVEVAPVPQLALTRAFHAQRPAIGALAPRAPGVV
NAPALLAELMDKSLSWRGPGDLHVVNLTLIPHTEEDLLWLDQALGEGSVTILSRGYGNCRITATAQDRLWRVQFFNSMDV
LILDTFEVTAMPEVVLAAPEDLADSAGRIREVLGAIR
>Mature_276_residues
AQNFHLPPVGFGPGSQPDDGEGLEWLPLPSGMRTYDMHLPEVGNVASLAPALAMLAEIAAACDRVAQGAAPVSFDLSALD
AANRALMAETLGQGEVSLRARGVPAVAVQESVFAGVWVLKAEGIDRVEVAPVPQLALTRAFHAQRPAIGALAPRAPGVVN
APALLAELMDKSLSWRGPGDLHVVNLTLIPHTEEDLLWLDQALGEGSVTILSRGYGNCRITATAQDRLWRVQFFNSMDVL
ILDTFEVTAMPEVVLAAPEDLADSAGRIREVLGAIR

Specific function: Not Known. Could Enhance The Incorporation Of Nickel To The Hydrogenase. [C]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the hupH/hyaF family [H]

Homologues:

Organism=Escherichia coli, GI1787211, Length=280, Percent_Identity=31.0714285714286, Blast_Score=115, Evalue=2e-27,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006894 [H]

Pfam domain/function: PF04809 HupH_C [H]

EC number: NA

Molecular weight: Translated: 29362; Mature: 29231

Theoretical pI: Translated: 4.44; Mature: 4.44

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAQNFHLPPVGFGPGSQPDDGEGLEWLPLPSGMRTYDMHLPEVGNVASLAPALAMLAEIA
CCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCEEEECCCCCCCCHHHHHHHHHHHHHHH
AACDRVAQGAAPVSFDLSALDAANRALMAETLGQGEVSLRARGVPAVAVQESVFAGVWVL
HHHHHHHCCCCCCEECHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCHHHHHHHHEEEEE
KAEGIDRVEVAPVPQLALTRAFHAQRPAIGALAPRAPGVVNAPALLAELMDKSLSWRGPG
EECCCCEEEECCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCC
DLHVVNLTLIPHTEEDLLWLDQALGEGSVTILSRGYGNCRITATAQDRLWRVQFFNSMDV
CEEEEEEEEECCCCHHHHHHHHHCCCCCEEEEECCCCCEEEEEEHHHHEEEEEECCCCCE
LILDTFEVTAMPEVVLAAPEDLADSAGRIREVLGAIR
EEEEEEEHHCCCCEEEECCHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure 
AQNFHLPPVGFGPGSQPDDGEGLEWLPLPSGMRTYDMHLPEVGNVASLAPALAMLAEIA
CCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCEEEECCCCCCCCHHHHHHHHHHHHHHH
AACDRVAQGAAPVSFDLSALDAANRALMAETLGQGEVSLRARGVPAVAVQESVFAGVWVL
HHHHHHHCCCCCCEECHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCHHHHHHHHEEEEE
KAEGIDRVEVAPVPQLALTRAFHAQRPAIGALAPRAPGVVNAPALLAELMDKSLSWRGPG
EECCCCEEEECCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCC
DLHVVNLTLIPHTEEDLLWLDQALGEGSVTILSRGYGNCRITATAQDRLWRVQFFNSMDV
CEEEEEEEEECCCCHHHHHHHHHCCCCCEEEEECCCCCEEEEEEHHHHEEEEEECCCCCE
LILDTFEVTAMPEVVLAAPEDLADSAGRIREVLGAIR
EEEEEEEHHCCCCEEEECCHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8497190 [H]