| Definition | Paracoccus denitrificans PD1222 chromosome 2, complete sequence. |
|---|---|
| Accession | NC_008687 |
| Length | 1,730,097 |
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The map label for this gene is 119385784
Identifier: 119385784
GI number: 119385784
Start: 242895
End: 243410
Strand: Direct
Name: 119385784
Synonym: Pden_3062
Alternate gene names: NA
Gene position: 242895-243410 (Clockwise)
Preceding gene: 119385783
Following gene: 119385786
Centisome position: 14.04
GC content: 57.17
Gene sequence:
>516_bases ATGGCATCTGGTTACATAACTATCAGAGGGGGGCTGTACTCCCTCCCTCTGGCCGCTTTGCTGGCCGGTCTGTCCGCCCT GCCGGTTTTTGCGACGGAAAAACACGCGCTGGGATTTGATGTCGCCATCAGCCTGTCGTCCAAAGCCGAAGCCGCGCTCA AGTCCACCCATGAGGGGATCTCGTTGTCGGCCACTTATTATGGCGAACCCCATCCCGGTGATGAGAAACACACCAACGCA ATGGGGATGGTAGATCTGGGAGCCGAGGATATCAATCTTCCAGACGGTGCGCGGACGGTTCATGTGACCGGTAAAACGGT CAGCGCCGATCGACTGCGGCTGATCAGTGGCGGGCCGATGGTGAACGTCAATCTCTTTTCCTCGCGCAAAAGCCATGATG ACAATATTTTGGCCTGCGATTTCATCGACGGTGCCGTTTCCAGCTTGAGGTCCGGGCCGGTGTATCTGCGTTGCGGCCTG ATCACGGAAAACCCGGAAACCGAGGTCAAGCCATGA
Upstream 100 bases:
>100_bases ACTATCAGGGCCAGCTTGCCACGGATGCGCGCGAGCATCGGCTGGGCGCCACTCTCGGCATGCAGTTCTGACGCCGTGTC TGAATACCAAGGAGAAAGCA
Downstream 100 bases:
>100_bases CTCCGGCAGGCAGAGATGAAACGGGGCGGAACATGCACCGAGGCAACCGACAGTTCCTTCAATAGTAATAACAGGAGACA ATAATATTATGCGCAACTGG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 171; Mature: 170
Protein sequence:
>171_residues MASGYITIRGGLYSLPLAALLAGLSALPVFATEKHALGFDVAISLSSKAEAALKSTHEGISLSATYYGEPHPGDEKHTNA MGMVDLGAEDINLPDGARTVHVTGKTVSADRLRLISGGPMVNVNLFSSRKSHDDNILACDFIDGAVSSLRSGPVYLRCGL ITENPETEVKP
Sequences:
>Translated_171_residues MASGYITIRGGLYSLPLAALLAGLSALPVFATEKHALGFDVAISLSSKAEAALKSTHEGISLSATYYGEPHPGDEKHTNA MGMVDLGAEDINLPDGARTVHVTGKTVSADRLRLISGGPMVNVNLFSSRKSHDDNILACDFIDGAVSSLRSGPVYLRCGL ITENPETEVKP >Mature_170_residues ASGYITIRGGLYSLPLAALLAGLSALPVFATEKHALGFDVAISLSSKAEAALKSTHEGISLSATYYGEPHPGDEKHTNAM GMVDLGAEDINLPDGARTVHVTGKTVSADRLRLISGGPMVNVNLFSSRKSHDDNILACDFIDGAVSSLRSGPVYLRCGLI TENPETEVKP
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 17952; Mature: 17820
Theoretical pI: Translated: 5.91; Mature: 5.91
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MASGYITIRGGLYSLPLAALLAGLSALPVFATEKHALGFDVAISLSSKAEAALKSTHEGI CCCCEEEEECCHHHHHHHHHHHCHHCCCEEECCCCCCCEEEEEEECCHHHHHHHHCCCCE SLSATYYGEPHPGDEKHTNAMGMVDLGAEDINLPDGARTVHVTGKTVSADRLRLISGGPM EEEEEECCCCCCCCCCCCCCEEEEEECCCCCCCCCCCEEEEEECCEECCCEEEEEECCCE VNVNLFSSRKSHDDNILACDFIDGAVSSLRSGPVYLRCGLITENPETEVKP EEEEEECCCCCCCCCEEEEECCHHHHHHHCCCCEEEEEEEEECCCCCCCCC >Mature Secondary Structure ASGYITIRGGLYSLPLAALLAGLSALPVFATEKHALGFDVAISLSSKAEAALKSTHEGI CCCEEEEECCHHHHHHHHHHHCHHCCCEEECCCCCCCEEEEEEECCHHHHHHHHCCCCE SLSATYYGEPHPGDEKHTNAMGMVDLGAEDINLPDGARTVHVTGKTVSADRLRLISGGPM EEEEEECCCCCCCCCCCCCCEEEEEECCCCCCCCCCCEEEEEECCEECCCEEEEEECCCE VNVNLFSSRKSHDDNILACDFIDGAVSSLRSGPVYLRCGLITENPETEVKP EEEEEECCCCCCCCCEEEEECCHHHHHHHCCCCEEEEEEEEECCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA