Definition Paracoccus denitrificans PD1222 chromosome 2, complete sequence.
Accession NC_008687
Length 1,730,097

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The map label for this gene is 119385685

Identifier: 119385685

GI number: 119385685

Start: 128477

End: 129601

Strand: Direct

Name: 119385685

Synonym: Pden_2960

Alternate gene names: NA

Gene position: 128477-129601 (Clockwise)

Preceding gene: 119385684

Following gene: 119385686

Centisome position: 7.43

GC content: 70.4

Gene sequence:

>1125_bases
ATGACCGACCTGACCCTGCGCTTTGCCTTCCTGACCGAGGCCGACCGGCTGAAATCCGTCGAGCGGGCGAATGTGCTGAT
GGACCTGTCGCGGCCGGAAAACAGCGCCGAGCACAGCTGGCACGTCGCGCTTTACGCGCTGGTCTTCGGCGCCTCGGACC
GTGCCATCGCGATGCTGCTGCTGCACGATCTGGTCGAGATCGACTGCGGCGACCATCCGATCCATCTGGTCCATGACACG
GCTGCCGTGCAGGCGGCCGAGGACGCCGCCGCGCGCCGGCTGTTCGGCATGTTGCCCGGCGGCGAGACGCTGCTGGCGCT
GTGGCGGGAGTTCGAGGCCGGCGAAAGCCCGGACGCCCGCATCGCCAAGCGCATGGACCACGTCCAGCCGCTGTTCCAGG
TGCTTTGCGCGCCCCGGCCCCTGGCCGATCATGTCGGAATCGTCCGCGACAACATGACATCGGGCCGTGCCCGGCGGCTG
TGGGCGGAATGGCCCGAGGCGATGGAGGCGGCGCAGGCCCTGCTGGAGGGCCGCGCGCCCTGCGGCGAACTGGCGCAGCG
CCTGGCCTTTCTGGCCGAGGCCGACCGGCTGAAATCGGTGCTGCGCGCCAGCCTGCTGTGCGACGGCTCGCGGCGCGAAA
ACAGCGCCGAGCACAGCTGGCACCTGGCGCTTTACGCGCTGGTCATGGCGGCCCATGCCGGGCCGGGGGTGGAGATCGGC
CGGGTGATCCGCATGCTGCTGCTGCACGACCTGGTCGAGATCGACACCGGCGACGTGCCGATCCATGCGCAGAACGGCGC
CGCCCATCACGGTGCCGCGCAGTTGCAGGCCGAGGCCGAGGCGGCGGAACGGATCTTCGGGCTGCTGCCCAAGGCCCAGG
GGGCTGAATTGCGCGCGCTCTGGACCGAGTTCGAGGCGAACGAGACCCCCGACGCGGTCTTCGCCAAGTCGCTCGACCGG
GCGCAGCCGGTGATGCAGAACATCGCCTCGGGCGGCGGCACCTGGGTCGAATACCGGGTGAGCTACGAGCAACTGGTCGA
GCGCGTGGGCCTGCGCATCGAGCGCGGGGCGCCGACGCTGTGGACCTGGCTCAGCGAAAGCGCGCGGGTCTATTTCCGCG
GCTGA

Upstream 100 bases:

>100_bases
AAGCCGATGATCGACACGGTGCAGGCCTATGTGCGCCGCCGCCTGACCGAGAACACCCGCTAGGAAACGGGGCCGGTGCC
GCCGGCCCCAGGCATTCGAC

Downstream 100 bases:

>100_bases
TCCCGAAGGGCGGCGGGGTGCGGGGCGGCAATCGGTATGCAATCGCATACCGGGCTTTCCTTTCGCGGCGAATGCGGCTA
TAGCGCGGCCGAGCCGAATC

Product: metal dependent phosphohydrolase

Products: NA

Alternate protein names: HD Domain Protein; Metal-Dependent Phosphohydrolase; HD Domain-Containing Protein; Metal-Dependent Phosphohydrolase HD Subdomain; HD Superfamily Hydrolase; Hydrolase; Metal-Dependent Phosphohydrolase HD Region; HD Superfamily Hydrolase-Like Protein; Hydrolases Of HD Superfamily; Hydrolase Of HD Superfamily; Metal-Dependent Phosphoesterase; Xin-Antitoxin System Toxin Component PIN Family; HD Superfamily Metal-Dependent Phosphohydrolase; HD Domain-Containing; HDDC2 Protein

Number of amino acids: Translated: 374; Mature: 373

Protein sequence:

>374_residues
MTDLTLRFAFLTEADRLKSVERANVLMDLSRPENSAEHSWHVALYALVFGASDRAIAMLLLHDLVEIDCGDHPIHLVHDT
AAVQAAEDAAARRLFGMLPGGETLLALWREFEAGESPDARIAKRMDHVQPLFQVLCAPRPLADHVGIVRDNMTSGRARRL
WAEWPEAMEAAQALLEGRAPCGELAQRLAFLAEADRLKSVLRASLLCDGSRRENSAEHSWHLALYALVMAAHAGPGVEIG
RVIRMLLLHDLVEIDTGDVPIHAQNGAAHHGAAQLQAEAEAAERIFGLLPKAQGAELRALWTEFEANETPDAVFAKSLDR
AQPVMQNIASGGGTWVEYRVSYEQLVERVGLRIERGAPTLWTWLSESARVYFRG

Sequences:

>Translated_374_residues
MTDLTLRFAFLTEADRLKSVERANVLMDLSRPENSAEHSWHVALYALVFGASDRAIAMLLLHDLVEIDCGDHPIHLVHDT
AAVQAAEDAAARRLFGMLPGGETLLALWREFEAGESPDARIAKRMDHVQPLFQVLCAPRPLADHVGIVRDNMTSGRARRL
WAEWPEAMEAAQALLEGRAPCGELAQRLAFLAEADRLKSVLRASLLCDGSRRENSAEHSWHLALYALVMAAHAGPGVEIG
RVIRMLLLHDLVEIDTGDVPIHAQNGAAHHGAAQLQAEAEAAERIFGLLPKAQGAELRALWTEFEANETPDAVFAKSLDR
AQPVMQNIASGGGTWVEYRVSYEQLVERVGLRIERGAPTLWTWLSESARVYFRG
>Mature_373_residues
TDLTLRFAFLTEADRLKSVERANVLMDLSRPENSAEHSWHVALYALVFGASDRAIAMLLLHDLVEIDCGDHPIHLVHDTA
AVQAAEDAAARRLFGMLPGGETLLALWREFEAGESPDARIAKRMDHVQPLFQVLCAPRPLADHVGIVRDNMTSGRARRLW
AEWPEAMEAAQALLEGRAPCGELAQRLAFLAEADRLKSVLRASLLCDGSRRENSAEHSWHLALYALVMAAHAGPGVEIGR
VIRMLLLHDLVEIDTGDVPIHAQNGAAHHGAAQLQAEAEAAERIFGLLPKAQGAELRALWTEFEANETPDAVFAKSLDRA
QPVMQNIASGGGTWVEYRVSYEQLVERVGLRIERGAPTLWTWLSESARVYFRG

Specific function: Unknown

COG id: COG1896

COG function: function code R; Predicted hydrolases of HD superfamily

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 41258; Mature: 41127

Theoretical pI: Translated: 5.55; Mature: 5.55

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTDLTLRFAFLTEADRLKSVERANVLMDLSRPENSAEHSWHVALYALVFGASDRAIAMLL
CCCEEEEHHHHHHHHHHHHHHHHHHHEECCCCCCCCCCHHHHHHHHHHHCCCCHHHHHHH
LHDLVEIDCGDHPIHLVHDTAAVQAAEDAAARRLFGMLPGGETLLALWREFEAGESPDAR
HHHHHHCCCCCCCEEEEECHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCCCHHH
IAKRMDHVQPLFQVLCAPRPLADHVGIVRDNMTSGRARRLWAEWPEAMEAAQALLEGRAP
HHHHHHHHHHHHHHHHCCCCCHHHCCHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCC
CGELAQRLAFLAEADRLKSVLRASLLCDGSRRENSAEHSWHLALYALVMAAHAGPGVEIG
HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCHHHH
RVIRMLLLHDLVEIDTGDVPIHAQNGAAHHGAAQLQAEAEAAERIFGLLPKAQGAELRAL
HHHHHHHHHHHHHCCCCCCEEEECCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCHHHHH
WTEFEANETPDAVFAKSLDRAQPVMQNIASGGGTWVEYRVSYEQLVERVGLRIERGAPTL
HHHHCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECHHHHHHHHCCEEECCCCHH
WTWLSESARVYFRG
HHHHCCCCEEEECC
>Mature Secondary Structure 
TDLTLRFAFLTEADRLKSVERANVLMDLSRPENSAEHSWHVALYALVFGASDRAIAMLL
CCEEEEHHHHHHHHHHHHHHHHHHHEECCCCCCCCCCHHHHHHHHHHHCCCCHHHHHHH
LHDLVEIDCGDHPIHLVHDTAAVQAAEDAAARRLFGMLPGGETLLALWREFEAGESPDAR
HHHHHHCCCCCCCEEEEECHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCCCHHH
IAKRMDHVQPLFQVLCAPRPLADHVGIVRDNMTSGRARRLWAEWPEAMEAAQALLEGRAP
HHHHHHHHHHHHHHHHCCCCCHHHCCHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCC
CGELAQRLAFLAEADRLKSVLRASLLCDGSRRENSAEHSWHLALYALVMAAHAGPGVEIG
HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCHHHH
RVIRMLLLHDLVEIDTGDVPIHAQNGAAHHGAAQLQAEAEAAERIFGLLPKAQGAELRAL
HHHHHHHHHHHHHCCCCCCEEEECCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCHHHHH
WTEFEANETPDAVFAKSLDRAQPVMQNIASGGGTWVEYRVSYEQLVERVGLRIERGAPTL
HHHHCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECHHHHHHHHCCEEECCCCHH
WTWLSESARVYFRG
HHHHCCCCEEEECC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA