| Definition | Chlorobium phaeobacteroides DSM 266 chromosome, complete genome. |
|---|---|
| Accession | NC_008639 |
| Length | 3,133,902 |
Click here to switch to the map view.
The map label for this gene is 119358503
Identifier: 119358503
GI number: 119358503
Start: 3130086
End: 3130685
Strand: Reverse
Name: 119358503
Synonym: Cpha266_2739
Alternate gene names: NA
Gene position: 3130685-3130086 (Counterclockwise)
Preceding gene: 119358504
Following gene: 119358502
Centisome position: 99.9
GC content: 46.83
Gene sequence:
>600_bases ATGGTGCTGATCGAGCAGGCAGATGTCTGGCTATTTCGTGAGGTGAACCAGAATATGGTTCACCCCGCAGCAGACGGTCT CATGGTGTTTCTCACGACCTTCGGACTTTCCTGGCCAATATTTTTTGTTGCGGCTCTTGTTATCCTGCTCAGAAAAGGAA GAGAAGGCGCACTTATCATCCTGTTTTCTCTCTGTGCCTTAGGAATTGCCGATTATACCGCCTCAGGGATACTCAAACCC CTTTTCCAGCGTATAAGACCCTGTTTTGTCCTTGAGGGGTGTCGATTGCTTGTCGATCAATCCCACTCCTTTTCGTTTGC CTCTTCACATGCCGCCAATGCCGCAGCAGTTGCCGCAACTATCTGGATATATTTTTACAGGAACGGTAGCATTGTTGACA AACTGTTTTCCCTGTTGATCGCTCTTTATGCCTTTTTTGTCGCTTATTCGAGAGTTTATGTCGGCGTTCATTATCCTTCG GACGTGTTCGCCGGTTCGTTCATCGGCATATGCAGCGCGTTGTTGACCTATATTATCTGGTCATGGCTTTATAAAAATGT TATCAGGATGATGATCATGCGTCGGGAGTTGAAACCATGA
Upstream 100 bases:
>100_bases ATATCAATGCTACGACCACCGCGGATGACATGCCGAATGTCAATCTCGGTACTTCATCATCGAAAAAGAAAAAAGCAGGG CCTAAAAAGTAACAAACACT
Downstream 100 bases:
>100_bases GCCAACGATACTGGGGCATCGATCTTGGCGGAACAAAAATCGAGGTTGTTGTTACCGACAGGGCTTCCGTCCCGCTGATT CGTCGACGGATAGCTACCGA
Product: phosphoesterase, PA-phosphatase related
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 199; Mature: 199
Protein sequence:
>199_residues MVLIEQADVWLFREVNQNMVHPAADGLMVFLTTFGLSWPIFFVAALVILLRKGREGALIILFSLCALGIADYTASGILKP LFQRIRPCFVLEGCRLLVDQSHSFSFASSHAANAAAVAATIWIYFYRNGSIVDKLFSLLIALYAFFVAYSRVYVGVHYPS DVFAGSFIGICSALLTYIIWSWLYKNVIRMMIMRRELKP
Sequences:
>Translated_199_residues MVLIEQADVWLFREVNQNMVHPAADGLMVFLTTFGLSWPIFFVAALVILLRKGREGALIILFSLCALGIADYTASGILKP LFQRIRPCFVLEGCRLLVDQSHSFSFASSHAANAAAVAATIWIYFYRNGSIVDKLFSLLIALYAFFVAYSRVYVGVHYPS DVFAGSFIGICSALLTYIIWSWLYKNVIRMMIMRRELKP >Mature_199_residues MVLIEQADVWLFREVNQNMVHPAADGLMVFLTTFGLSWPIFFVAALVILLRKGREGALIILFSLCALGIADYTASGILKP LFQRIRPCFVLEGCRLLVDQSHSFSFASSHAANAAAVAATIWIYFYRNGSIVDKLFSLLIALYAFFVAYSRVYVGVHYPS DVFAGSFIGICSALLTYIIWSWLYKNVIRMMIMRRELKP
Specific function: Unknown
COG id: COG0671
COG function: function code I; Membrane-associated phospholipid phosphatase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR016118 - InterPro: IPR000326 - InterPro: IPR015414 [H]
Pfam domain/function: PF01569 PAP2; PF09335 SNARE_assoc [H]
EC number: NA
Molecular weight: Translated: 22436; Mature: 22436
Theoretical pI: Translated: 9.13; Mature: 9.13
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.0 %Cys (Translated Protein) 3.0 %Met (Translated Protein) 5.0 %Cys+Met (Translated Protein) 2.0 %Cys (Mature Protein) 3.0 %Met (Mature Protein) 5.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVLIEQADVWLFREVNQNMVHPAADGLMVFLTTFGLSWPIFFVAALVILLRKGREGALII CEEEECCCHHHHHHHHHHHCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCHHHH LFSLCALGIADYTASGILKPLFQRIRPCFVLEGCRLLVDQSHSFSFASSHAANAAAVAAT HHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHCCCCCCCHHHHHCCHHHHHHHH IWIYFYRNGSIVDKLFSLLIALYAFFVAYSRVYVGVHYPSDVFAGSFIGICSALLTYIIW HHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHEEEECCHHHHHHHHHHHHHHHHHHHHH SWLYKNVIRMMIMRRELKP HHHHHHHHHHHHHHHHCCC >Mature Secondary Structure MVLIEQADVWLFREVNQNMVHPAADGLMVFLTTFGLSWPIFFVAALVILLRKGREGALII CEEEECCCHHHHHHHHHHHCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCHHHH LFSLCALGIADYTASGILKPLFQRIRPCFVLEGCRLLVDQSHSFSFASSHAANAAAVAAT HHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHCCCCCCCHHHHHCCHHHHHHHH IWIYFYRNGSIVDKLFSLLIALYAFFVAYSRVYVGVHYPSDVFAGSFIGICSALLTYIIW HHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHEEEECCHHHHHHHHHHHHHHHHHHHHH SWLYKNVIRMMIMRRELKP HHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8688087 [H]