Definition Chlorobium phaeobacteroides DSM 266 chromosome, complete genome.
Accession NC_008639
Length 3,133,902

Click here to switch to the map view.

The map label for this gene is 119358463

Identifier: 119358463

GI number: 119358463

Start: 3091098

End: 3092147

Strand: Reverse

Name: 119358463

Synonym: Cpha266_2699

Alternate gene names: NA

Gene position: 3092147-3091098 (Counterclockwise)

Preceding gene: 119358467

Following gene: 119358462

Centisome position: 98.67

GC content: 49.9

Gene sequence:

>1050_bases
ATGGAAACAGGGATAAAAAAGGAAGAGCTGCTGCATGCGCCAGTCAGGCATATCGATATAAAAGAGCTCAATATTGTTCC
CCTGATCGACCAGATGAGCGGTACAGCCTTTCAGGCAAGAAATCTTGCCAGGGCAGCATCAATTGTTGACCTCATGCAGC
AGGATAAAGAGTGTGCGGTCATTCTCACTCTTGCAGGATCGCTTATAAGCGCGGGGTTGAAACAGGTGATCATCGACATG
ATCGACAACCATATGGTTGACGCCATTGTATCGACAGGCGCAAATATTGTTGACCAGGACTTTTTCGAAGCCCTTGGGTT
TCGCCACTATCAGGGGACGCCGTTTATTGACGACGCCATACTCAGGGATCTGCATATCGACCGTATTTACGATACCTATA
TCGATGAAGACGATCTTCGGGTCTGTGACGATACAACGGCGCTCATAGCCAACTCCATGAAGCCGGGAGCATACTCGTCG
CGCGAATTTATTGTCGAGATGGCCAGATACATCGAAAAGCACCATCACGACAAGAACTCCATTGTCTATAAAGCCTATGA
AAAAGGGGTGCCGATTTTCTGCCCCGCATTTTCGGACTGTTCTGCGGGATTCGGACTTGTGCACCATCAGTGGCACAACC
CCGAAAACCATGTCGCCATCGACTCGGTAAAAGATTTCCGCGAACTCACCCGTATCAAGATTGCCAACGATAAAACCGGT
ATTTTCATGATTGGCGGAGGAGTTCCGAAAAACTTCACCCAGGATATCGTTGTCGCCGCCGAAGTTCTCGGATACGAGGA
TGTATCGATGCACACCTATGCCGTTCAGATCACCGTTGCTGACGAACGGGACGGGGCGCTTTCGGGATCGACCCTCAAAG
AGGCAAGTTCCTGGGGAAAGGTCGATACCGTTCATGAGCAGATGGTGTTTGCTGAAGCCACGATTGCGCTGCCCCTTATT
GCCGGATATGCCTATCACAAACGAAACTGGGAAGGGCGTCGGGCAAAAAATTTCAATGCTATGCTTGACCGTCAATCCGT
AACAGCCTGA

Upstream 100 bases:

>100_bases
CAGATCCGGAAGGAAGCAGCATCCGGTAATTTGAATGTGTGATATAGTAAGCTTACTCTCTTTTTTTTTGAACATTTTTA
CTACAGCTTCGGGAGTCATT

Downstream 100 bases:

>100_bases
GGAGTCAGAATGAAATTTTTTATTGATACGGCAAGTCTTGAAGAAATTCAGGCAGCCAAGGATCTTGGCATGCTCGACGG
CGTGACGACGAATCCCTCGC

Product: deoxyhypusine synthase-like protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 349; Mature: 349

Protein sequence:

>349_residues
METGIKKEELLHAPVRHIDIKELNIVPLIDQMSGTAFQARNLARAASIVDLMQQDKECAVILTLAGSLISAGLKQVIIDM
IDNHMVDAIVSTGANIVDQDFFEALGFRHYQGTPFIDDAILRDLHIDRIYDTYIDEDDLRVCDDTTALIANSMKPGAYSS
REFIVEMARYIEKHHHDKNSIVYKAYEKGVPIFCPAFSDCSAGFGLVHHQWHNPENHVAIDSVKDFRELTRIKIANDKTG
IFMIGGGVPKNFTQDIVVAAEVLGYEDVSMHTYAVQITVADERDGALSGSTLKEASSWGKVDTVHEQMVFAEATIALPLI
AGYAYHKRNWEGRRAKNFNAMLDRQSVTA

Sequences:

>Translated_349_residues
METGIKKEELLHAPVRHIDIKELNIVPLIDQMSGTAFQARNLARAASIVDLMQQDKECAVILTLAGSLISAGLKQVIIDM
IDNHMVDAIVSTGANIVDQDFFEALGFRHYQGTPFIDDAILRDLHIDRIYDTYIDEDDLRVCDDTTALIANSMKPGAYSS
REFIVEMARYIEKHHHDKNSIVYKAYEKGVPIFCPAFSDCSAGFGLVHHQWHNPENHVAIDSVKDFRELTRIKIANDKTG
IFMIGGGVPKNFTQDIVVAAEVLGYEDVSMHTYAVQITVADERDGALSGSTLKEASSWGKVDTVHEQMVFAEATIALPLI
AGYAYHKRNWEGRRAKNFNAMLDRQSVTA
>Mature_349_residues
METGIKKEELLHAPVRHIDIKELNIVPLIDQMSGTAFQARNLARAASIVDLMQQDKECAVILTLAGSLISAGLKQVIIDM
IDNHMVDAIVSTGANIVDQDFFEALGFRHYQGTPFIDDAILRDLHIDRIYDTYIDEDDLRVCDDTTALIANSMKPGAYSS
REFIVEMARYIEKHHHDKNSIVYKAYEKGVPIFCPAFSDCSAGFGLVHHQWHNPENHVAIDSVKDFRELTRIKIANDKTG
IFMIGGGVPKNFTQDIVVAAEVLGYEDVSMHTYAVQITVADERDGALSGSTLKEASSWGKVDTVHEQMVFAEATIALPLI
AGYAYHKRNWEGRRAKNFNAMLDRQSVTA

Specific function: Unknown

COG id: COG1899

COG function: function code O; Deoxyhypusine synthase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the deoxyhypusine synthase family [H]

Homologues:

Organism=Homo sapiens, GI4503325, Length=340, Percent_Identity=27.0588235294118, Blast_Score=106, Evalue=4e-23,
Organism=Caenorhabditis elegans, GI17536927, Length=348, Percent_Identity=27.0114942528736, Blast_Score=108, Evalue=4e-24,
Organism=Saccharomyces cerevisiae, GI6321859, Length=349, Percent_Identity=24.3553008595989, Blast_Score=103, Evalue=3e-23,
Organism=Drosophila melanogaster, GI45550569, Length=357, Percent_Identity=28.0112044817927, Blast_Score=113, Evalue=2e-25,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002773 [H]

Pfam domain/function: PF01916 DS [H]

EC number: NA

Molecular weight: Translated: 38926; Mature: 38926

Theoretical pI: Translated: 5.37; Mature: 5.37

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
4.3 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
3.2 %Met     (Mature Protein)
4.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
METGIKKEELLHAPVRHIDIKELNIVPLIDQMSGTAFQARNLARAASIVDLMQQDKECAV
CCCCCCHHHHHHCCHHHCCHHHCEEEEEHHHCCCCHHHHHHHHHHHHHHHHHHCCCCEEE
ILTLAGSLISAGLKQVIIDMIDNHMVDAIVSTGANIVDQDFFEALGFRHYQGTPFIDDAI
EHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCCCCCHHHHH
LRDLHIDRIYDTYIDEDDLRVCDDTTALIANSMKPGAYSSREFIVEMARYIEKHHHDKNS
HHHHHHHHHHHHHCCCCCCEECCCHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHCCCCCC
IVYKAYEKGVPIFCPAFSDCSAGFGLVHHQWHNPENHVAIDSVKDFRELTRIKIANDKTG
EEEEHHHCCCCEEECCCCCCCCCCCCHHHCCCCCCCCEEHHHHHHHHHHHHEEEECCCCC
IFMIGGGVPKNFTQDIVVAAEVLGYEDVSMHTYAVQITVADERDGALSGSTLKEASSWGK
EEEECCCCCCCHHHHHHHHHHHHCCCCCEEEEEEEEEEEECCCCCCCCCCHHHHHHCCCC
VDTVHEQMVFAEATIALPLIAGYAYHKRNWEGRRAKNFNAMLDRQSVTA
HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHCHHHCCC
>Mature Secondary Structure
METGIKKEELLHAPVRHIDIKELNIVPLIDQMSGTAFQARNLARAASIVDLMQQDKECAV
CCCCCCHHHHHHCCHHHCCHHHCEEEEEHHHCCCCHHHHHHHHHHHHHHHHHHCCCCEEE
ILTLAGSLISAGLKQVIIDMIDNHMVDAIVSTGANIVDQDFFEALGFRHYQGTPFIDDAI
EHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCCCCCHHHHH
LRDLHIDRIYDTYIDEDDLRVCDDTTALIANSMKPGAYSSREFIVEMARYIEKHHHDKNS
HHHHHHHHHHHHHCCCCCCEECCCHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHCCCCCC
IVYKAYEKGVPIFCPAFSDCSAGFGLVHHQWHNPENHVAIDSVKDFRELTRIKIANDKTG
EEEEHHHCCCCEEECCCCCCCCCCCCHHHCCCCCCCCEEHHHHHHHHHHHHEEEECCCCC
IFMIGGGVPKNFTQDIVVAAEVLGYEDVSMHTYAVQITVADERDGALSGSTLKEASSWGK
EEEECCCCCCCHHHHHHHHHHHHCCCCCEEEEEEEEEEEECCCCCCCCCCHHHHHHCCCC
VDTVHEQMVFAEATIALPLIAGYAYHKRNWEGRRAKNFNAMLDRQSVTA
HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHCHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA