| Definition | Chlorobium phaeobacteroides DSM 266 chromosome, complete genome. |
|---|---|
| Accession | NC_008639 |
| Length | 3,133,902 |
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The map label for this gene is yjeE [C]
Identifier: 119358430
GI number: 119358430
Start: 3059902
End: 3060333
Strand: Reverse
Name: yjeE [C]
Synonym: Cpha266_2666
Alternate gene names: 119358430
Gene position: 3060333-3059902 (Counterclockwise)
Preceding gene: 119358431
Following gene: 119358429
Centisome position: 97.65
GC content: 56.71
Gene sequence:
>432_bases ATGATCAGGGAATTCCTCTCCGGCTCGCCCGACGCAACCCGTGACTATGCGCGTCAGTTTGCCTCCGCGCTTCAGCCCGG CGACATAATCTGTCTTGCCGGGGAACTCGGAGCGGGCAAAACCGAGTTTATGAGAGGAGTCGCCGAAGTGTTCAATTGCG ACGACCAGTTATCGAGTCCCACGTTTGCCCTGTTTAATATCTATCACGGTTCGCGTCAGGGCAAGCCGGTCACGCTGCAC CACTTCGATCTCTACCGCATCGAGCAGCCCGGAGAGCTCGAAACGATCGGGTTCGGCGACTATCTTTCCGGCCCATGGAT CTCCGTTGTGGAGTGGGGCGAAAAATTTCCGGAATACCGAACCATGTACACCCGTACCGTAACGCTCTGCCATGCCGGCG GCGACAACAGGCTAATTCAAATAACAGGCTGA
Upstream 100 bases:
>100_bases GCCGTGTCGGAATCAGGAGAGGTCATGCCTCAGAAATCAACGTTTTTTTATCCGAAAATAATGACAGGACTTGTCTTCAA CCCGCTCGACTGATACAGCC
Downstream 100 bases:
>100_bases ACGCCAATGCACCTTCTCTCCATCGAATGCACCCATCTTGCCCTGAGCGCGGCAGTTTCAAACCAGGGTACCCTCACGCT GAGGATCGGCGCAGAGTGGA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 143; Mature: 143
Protein sequence:
>143_residues MIREFLSGSPDATRDYARQFASALQPGDIICLAGELGAGKTEFMRGVAEVFNCDDQLSSPTFALFNIYHGSRQGKPVTLH HFDLYRIEQPGELETIGFGDYLSGPWISVVEWGEKFPEYRTMYTRTVTLCHAGGDNRLIQITG
Sequences:
>Translated_143_residues MIREFLSGSPDATRDYARQFASALQPGDIICLAGELGAGKTEFMRGVAEVFNCDDQLSSPTFALFNIYHGSRQGKPVTLH HFDLYRIEQPGELETIGFGDYLSGPWISVVEWGEKFPEYRTMYTRTVTLCHAGGDNRLIQITG >Mature_143_residues MIREFLSGSPDATRDYARQFASALQPGDIICLAGELGAGKTEFMRGVAEVFNCDDQLSSPTFALFNIYHGSRQGKPVTLH HFDLYRIEQPGELETIGFGDYLSGPWISVVEWGEKFPEYRTMYTRTVTLCHAGGDNRLIQITG
Specific function: Unknown
COG id: COG0802
COG function: function code R; Predicted ATPase or kinase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the UPF0079 family [H]
Homologues:
Organism=Escherichia coli, GI1790610, Length=108, Percent_Identity=37.962962962963, Blast_Score=72, Evalue=2e-14,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003442 [H]
Pfam domain/function: PF02367 UPF0079 [H]
EC number: NA
Molecular weight: Translated: 15970; Mature: 15970
Theoretical pI: Translated: 4.91; Mature: 4.91
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.1 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 4.2 %Cys+Met (Translated Protein) 2.1 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 4.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIREFLSGSPDATRDYARQFASALQPGDIICLAGELGAGKTEFMRGVAEVFNCDDQLSSP CCCCHHCCCCCCHHHHHHHHHHHCCCCCEEEEECCCCCCHHHHHHHHHHHHCCCCCCCCC TFALFNIYHGSRQGKPVTLHHFDLYRIEQPGELETIGFGDYLSGPWISVVEWGEKFPEYR EEEEEEEEECCCCCCCEEEEEEEEEEECCCCCEEEEECCCCCCCCHHHHHHHHHHCCHHH TMYTRTVTLCHAGGDNRLIQITG HHHEEEEEEEEECCCCEEEEEEC >Mature Secondary Structure MIREFLSGSPDATRDYARQFASALQPGDIICLAGELGAGKTEFMRGVAEVFNCDDQLSSP CCCCHHCCCCCCHHHHHHHHHHHCCCCCEEEEECCCCCCHHHHHHHHHHHHCCCCCCCCC TFALFNIYHGSRQGKPVTLHHFDLYRIEQPGELETIGFGDYLSGPWISVVEWGEKFPEYR EEEEEEEEECCCCCCCEEEEEEEEEEECCCCCEEEEECCCCCCCCHHHHHHHHHHCCHHH TMYTRTVTLCHAGGDNRLIQITG HHHEEEEEEEEECCCCEEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: ATP [C]
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 11557893 [H]