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The map label for this gene is psrC [H]

Identifier: 119358332

GI number: 119358332

Start: 2938881

End: 2939876

Strand: Direct

Name: psrC [H]

Synonym: Cpha266_2564

Alternate gene names: 119358332

Gene position: 2938881-2939876 (Clockwise)

Preceding gene: 119358331

Following gene: 119358333

Centisome position: 93.78

GC content: 54.52

Gene sequence:

>996_bases
ATGATGGCAACCGCAGTCAGCGAAATAATGTCAACGAAAATCAACCCGAATGTGGTACCCCATCTCCACATCTGGGAGTG
GCACATTCCTCTCTACCTCTTTCTTGGCGGTATGGCCGGCGGACTACTGGTCATCACCTCCATCATGATCGTCCTGAAAA
GACAGTTCGGCATAGGCCCTCGTGACGTGGGCGAAGGGTGCCCCTGCCTGGCCATACGCATAGGATCGTTCCTGTCGCCG
ACACTCCTTGGCATCGGCATGCTCTTTCTCTTTCTCGACCTTGCCCATCCCCTCTACGTCTGGGCATTCTATACCACCAT
CCAGCCCACCTCGCCAATGTCGGCAGGCAGCTGGATCCTTATCGCCTTCTTCCCCCTCGCTATTCTGCAGGCGATGCTGG
TCAACCGAAACCAGTTGCGAGGCTTCAATATCGGGCCGGTCAGTAAAATTATCGACTGGACGGAACAACACATGACCATC
GTAGCCCTAGCCAACGCCCATATCGGCGTCGGAATCGGTATCTATACCGGCATTCTCCTCTCCTTTTTCTCCGCCCGTCC
GCTCTGGTCAAGCTCCATCCTCGGCATGCTCTTTCTTGTCTCCGGAATATCAAGCGCAGCAGCACTCATGCTGCTCCTTG
CACCCAAAGACGAAAAACCGGTCTACAGCATGATTGACGCAAACGCCATCTGGATCGAACTGATGACGGTCGGTCTCTTT
GTGCTTGGAGGACTTACCGGTTCGGCAAACACCCACGGCGCCATGATGCATCTGATTACCGGCGACGTCAACCTTGCCGG
CATGTCCTACATGTTCTGGTTCTGGGGAATCTTTGTTGCGGCCGGTCTTGTCGTCCCCCTGTTCCTCGAGTTTATGGAAG
CGGCCGGAGTCCACATAAAATTTCCGAACGTAGCCCCGGTCATGGTGCTCTGCGGCGGATTAATCCTCAGATTCCTTATT
GTCTTTGCCGGTCAAACCTACCACACCTTCATGTAA

Upstream 100 bases:

>100_bases
AACTCATGAACGGCAAACTCGTCTACCGGCAAAAAGAGCACGCCGGCACGGAACCAAGCCTCTACTGGATTTCTGCAAGC
AATAAACCCGGAGCGTAATC

Downstream 100 bases:

>100_bases
GACCGGACTGGAATAAACTCATTGCCGGGAAGTAAAGGGCTCCGGGCAGGCGATGCCCCTTGCTTCCCGAAGCCGAAACA
AGAAAATCATGAACAAGACC

Product: polysulfide reductase, NrfD

Products: oxidized cytochrome C552; NH3 [C]

Alternate protein names: Sulfur reductase chain C [H]

Number of amino acids: Translated: 331; Mature: 331

Protein sequence:

>331_residues
MMATAVSEIMSTKINPNVVPHLHIWEWHIPLYLFLGGMAGGLLVITSIMIVLKRQFGIGPRDVGEGCPCLAIRIGSFLSP
TLLGIGMLFLFLDLAHPLYVWAFYTTIQPTSPMSAGSWILIAFFPLAILQAMLVNRNQLRGFNIGPVSKIIDWTEQHMTI
VALANAHIGVGIGIYTGILLSFFSARPLWSSSILGMLFLVSGISSAAALMLLLAPKDEKPVYSMIDANAIWIELMTVGLF
VLGGLTGSANTHGAMMHLITGDVNLAGMSYMFWFWGIFVAAGLVVPLFLEFMEAAGVHIKFPNVAPVMVLCGGLILRFLI
VFAGQTYHTFM

Sequences:

>Translated_331_residues
MMATAVSEIMSTKINPNVVPHLHIWEWHIPLYLFLGGMAGGLLVITSIMIVLKRQFGIGPRDVGEGCPCLAIRIGSFLSP
TLLGIGMLFLFLDLAHPLYVWAFYTTIQPTSPMSAGSWILIAFFPLAILQAMLVNRNQLRGFNIGPVSKIIDWTEQHMTI
VALANAHIGVGIGIYTGILLSFFSARPLWSSSILGMLFLVSGISSAAALMLLLAPKDEKPVYSMIDANAIWIELMTVGLF
VLGGLTGSANTHGAMMHLITGDVNLAGMSYMFWFWGIFVAAGLVVPLFLEFMEAAGVHIKFPNVAPVMVLCGGLILRFLI
VFAGQTYHTFM
>Mature_331_residues
MMATAVSEIMSTKINPNVVPHLHIWEWHIPLYLFLGGMAGGLLVITSIMIVLKRQFGIGPRDVGEGCPCLAIRIGSFLSP
TLLGIGMLFLFLDLAHPLYVWAFYTTIQPTSPMSAGSWILIAFFPLAILQAMLVNRNQLRGFNIGPVSKIIDWTEQHMTI
VALANAHIGVGIGIYTGILLSFFSARPLWSSSILGMLFLVSGISSAAALMLLLAPKDEKPVYSMIDANAIWIELMTVGLF
VLGGLTGSANTHGAMMHLITGDVNLAGMSYMFWFWGIFVAAGLVVPLFLEFMEAAGVHIKFPNVAPVMVLCGGLILRFLI
VFAGQTYHTFM

Specific function: Component of the phosphorylative electron transport system with polysulfide as the terminal acceptor [H]

COG id: COG3301

COG function: function code P; Formate-dependent nitrite reductase, membrane component

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the nrfD family [H]

Homologues:

Organism=Escherichia coli, GI1790509, Length=317, Percent_Identity=27.7602523659306, Blast_Score=74, Evalue=1e-14,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005614 [H]

Pfam domain/function: PF03916 NrfD [H]

EC number: NA

Molecular weight: Translated: 36035; Mature: 36035

Theoretical pI: Translated: 7.34; Mature: 7.34

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
6.0 %Met     (Translated Protein)
6.9 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
6.0 %Met     (Mature Protein)
6.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MMATAVSEIMSTKINPNVVPHLHIWEWHIPLYLFLGGMAGGLLVITSIMIVLKRQFGIGP
CCHHHHHHHHHCCCCCCCCCEEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
RDVGEGCPCLAIRIGSFLSPTLLGIGMLFLFLDLAHPLYVWAFYTTIQPTSPMSAGSWIL
HHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHH
IAFFPLAILQAMLVNRNQLRGFNIGPVSKIIDWTEQHMTIVALANAHIGVGIGIYTGILL
HHHHHHHHHHHHHHCHHHCCCCCCCHHHHHHHHHHHHEEEEEEECCCCCCHHHHHHHHHH
SFFSARPLWSSSILGMLFLVSGISSAAALMLLLAPKDEKPVYSMIDANAIWIELMTVGLF
HHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHCCCHHHHHHHHHHHH
VLGGLTGSANTHGAMMHLITGDVNLAGMSYMFWFWGIFVAAGLVVPLFLEFMEAAGVHIK
HHHCCCCCCCCCCCEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEE
FPNVAPVMVLCGGLILRFLIVFAGQTYHTFM
CCCCHHHHHHHHHHHHHHHHHHCCCHHHHCC
>Mature Secondary Structure
MMATAVSEIMSTKINPNVVPHLHIWEWHIPLYLFLGGMAGGLLVITSIMIVLKRQFGIGP
CCHHHHHHHHHCCCCCCCCCEEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
RDVGEGCPCLAIRIGSFLSPTLLGIGMLFLFLDLAHPLYVWAFYTTIQPTSPMSAGSWIL
HHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHH
IAFFPLAILQAMLVNRNQLRGFNIGPVSKIIDWTEQHMTIVALANAHIGVGIGIYTGILL
HHHHHHHHHHHHHHCHHHCCCCCCCHHHHHHHHHHHHEEEEEEECCCCCCHHHHHHHHHH
SFFSARPLWSSSILGMLFLVSGISSAAALMLLLAPKDEKPVYSMIDANAIWIELMTVGLF
HHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHCCCHHHHHHHHHHHH
VLGGLTGSANTHGAMMHLITGDVNLAGMSYMFWFWGIFVAAGLVVPLFLEFMEAAGVHIK
HHHCCCCCCCCCCCEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEE
FPNVAPVMVLCGGLILRFLIVFAGQTYHTFM
CCCCHHHHHHHHHHHHHHHHHHCCCHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: reduced cytochrome C552; nitrite [C]

Specific reaction: reduced cytochrome C552 + nitrite = oxidized cytochrome C552 + NH3 [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 1597189; 14500908 [H]