| Definition | Chlorobium phaeobacteroides DSM 266 chromosome, complete genome. |
|---|---|
| Accession | NC_008639 |
| Length | 3,133,902 |
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The map label for this gene is 119358245
Identifier: 119358245
GI number: 119358245
Start: 2849303
End: 2849734
Strand: Reverse
Name: 119358245
Synonym: Cpha266_2477
Alternate gene names: NA
Gene position: 2849734-2849303 (Counterclockwise)
Preceding gene: 119358246
Following gene: 119358244
Centisome position: 90.93
GC content: 51.62
Gene sequence:
>432_bases ATGCAGGAAGCACTTGAGCGGCTCAGGCGGTACGGCCTGAAAATAACTCCTCGACGCAGGGCGATTTTTTCAGCGTTTTC GGATTGTTCCATTGCCCTCTTTCCCCGGATGGTGCAGGAGAGCTTGAGGCTTCAGTTCAGTCGTTGCGGACTACCCGGGA TATATCGAAATCTTGAAGCACTTGCCGATTGTGGTGTTCTTGTCAGGGTGGCGGGGTTCGGCCGTCAGCGGAGTTATGCG CTTTGCAGATATTCCGGGAAGGATATTCCGCATTATCATCAGATCATCTGCATTTCGTGCGGACGTATTGGGAGTTTTCA TGAGTGTGCCTGGCATGATGGGATGAAGATCGACGATTTCACGCTCGTCAGTCATATTGTTCAGCTTCAGGGGATTTGCG CTTCTTGCGCATCACCAGACACGGAGACATAA
Upstream 100 bases:
>100_bases TGGCGGTGGCATTCTTTTTTCTGCTACCGCCAAAACACTTTTCTTCTCTTGATTTGCCTCGCTTTTTGTAATTTAAATAG AAATAGTTTCCATTTAAAAT
Downstream 100 bases:
>100_bases TCATGTTTTTCATCCCGATCAGATTCATTGCCATTGCGCTTCTTCTGCTTTTTCCTTTTTTTTATTCCGGCTGTGTCTCA AAACCTGTTGAGAAACGGTT
Product: ferric uptake regulator family protein
Products: NA
Alternate protein names: Ferric Uptake Regulator Family Protein; FUR Family Transcriptional Regulator; Fur Family Transcriptional Regulator; Fur Family Ferric Uptake Regulator; Zinc Uptake Regulator ZurR
Number of amino acids: Translated: 143; Mature: 143
Protein sequence:
>143_residues MQEALERLRRYGLKITPRRRAIFSAFSDCSIALFPRMVQESLRLQFSRCGLPGIYRNLEALADCGVLVRVAGFGRQRSYA LCRYSGKDIPHYHQIICISCGRIGSFHECAWHDGMKIDDFTLVSHIVQLQGICASCASPDTET
Sequences:
>Translated_143_residues MQEALERLRRYGLKITPRRRAIFSAFSDCSIALFPRMVQESLRLQFSRCGLPGIYRNLEALADCGVLVRVAGFGRQRSYA LCRYSGKDIPHYHQIICISCGRIGSFHECAWHDGMKIDDFTLVSHIVQLQGICASCASPDTET >Mature_143_residues MQEALERLRRYGLKITPRRRAIFSAFSDCSIALFPRMVQESLRLQFSRCGLPGIYRNLEALADCGVLVRVAGFGRQRSYA LCRYSGKDIPHYHQIICISCGRIGSFHECAWHDGMKIDDFTLVSHIVQLQGICASCASPDTET
Specific function: Unknown
COG id: COG0735
COG function: function code P; Fe2+/Zn2+ uptake regulation proteins
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 16145; Mature: 16145
Theoretical pI: Translated: 8.49; Mature: 8.49
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
6.3 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 8.4 %Cys+Met (Translated Protein) 6.3 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 8.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQEALERLRRYGLKITPRRRAIFSAFSDCSIALFPRMVQESLRLQFSRCGLPGIYRNLEA CHHHHHHHHHCCCCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHH LADCGVLVRVAGFGRQRSYALCRYSGKDIPHYHQIICISCGRIGSFHECAWHDGMKIDDF HHHCCHHHHHHCCCCCCCEEEEEECCCCCCHHHHEEEEECCCCCCCHHHHHCCCCCCCHH TLVSHIVQLQGICASCASPDTET HHHHHHHHHHHHHHHCCCCCCCC >Mature Secondary Structure MQEALERLRRYGLKITPRRRAIFSAFSDCSIALFPRMVQESLRLQFSRCGLPGIYRNLEA CHHHHHHHHHCCCCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHH LADCGVLVRVAGFGRQRSYALCRYSGKDIPHYHQIICISCGRIGSFHECAWHDGMKIDDF HHHCCHHHHHHCCCCCCCEEEEEECCCCCCHHHHEEEEECCCCCCCHHHHHCCCCCCCHH TLVSHIVQLQGICASCASPDTET HHHHHHHHHHHHHHHCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA