| Definition | Chlorobium phaeobacteroides DSM 266 chromosome, complete genome. |
|---|---|
| Accession | NC_008639 |
| Length | 3,133,902 |
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The map label for this gene is adcA [H]
Identifier: 119358244
GI number: 119358244
Start: 2848359
End: 2849300
Strand: Reverse
Name: adcA [H]
Synonym: Cpha266_2476
Alternate gene names: 119358244
Gene position: 2849300-2848359 (Counterclockwise)
Preceding gene: 119358245
Following gene: 119358243
Centisome position: 90.92
GC content: 49.58
Gene sequence:
>942_bases ATGTTTTTCATCCCGATCAGATTCATTGCCATTGCGCTTCTTCTGCTTTTTCCTTTTTTTTATTCCGGCTGTGTCTCAAA ACCTGTTGAGAAACGGTTGCAGGTTGTCGCTTCGATTGCACCGCTTGCCTACTTTGCTGAAAAGATTGGCGGTGGTTACG TGACGGTTTCCGTTATGGTTCCTCCTGGCGGTAATCCTCATACCTATGAACCGACGCCAAGGCAGATGTCGATGCTTGGC AGCGCGAAGCTGTTTATAAAGGCAGGGTCCGGCGTTGAGTTTGAACTGGATTTGATGCAGAAGATTATGTCGATGTATCC TGTTCTCAGGATCTGTAACGCCGCTTCGGGCATTCATTTAAAGCCTGCAGAGCATGATGGTGAGCATAGCGAAAGGCACG ATTATCCAGATGAGCATAGCGAAAGGCACGATTATCCAGATGAGCATCGTCATGGCCTTGTTGATCCTCACTACTGGCTT TCGCCTCGAAATGCTCTGGTTATTGCAGAGAATGTTGAGAGATCTCTTATCGAAGCCGATCCCGAGCGTACTGTCTTTTA TCAGGCCAATGCCGACAGGTTGAAGCAAGAGCTGCATGGGCTTTCAAGCGAGATTCATGTAAAGCTTGCGTCGGTCTCGA ATCGTCGTTTTCTTGTTTTTCATCCCGCATGGGGTTACTATGCTTCGGATTTTGCGCTGGAGCAGATTGCCGCAGAAGAG GAGGGTAAGACGCTGACCCCCCGCCAGCTTGGGCGAGTCATTCAGAAAGCCAGAACAAACGGGATAAGAGTTGTCTTTGT GTCCCCTCAGTTCAGCACCGTACAAGCGGAGACCATCGCAAGGGAAATAGGAGGTGTTACCCGGGCTGTCGATCCTCTTG CTTTTGAGTATCAGGAAAATCTTCTCCGCGCTACCGATGCCTTCAAGGGAGGAATGCAGTGA
Upstream 100 bases:
>100_bases ATGATGGGATGAAGATCGACGATTTCACGCTCGTCAGTCATATTGTTCAGCTTCAGGGGATTTGCGCTTCTTGCGCATCA CCAGACACGGAGACATAATC
Downstream 100 bases:
>100_bases ACCGGGTGCTTGTCGACTGCGATCGCCTTTCCGTTGTGCTTGATGGATCAAGGGTTCTCGATAATCTGACACTGCAGGTC TGCGAGGGGGATTTTCTTGG
Product: periplasmic solute binding protein
Products: Zn (II) [Cytoplasm]; ADP; phosphate [C]
Alternate protein names: NA
Number of amino acids: Translated: 313; Mature: 313
Protein sequence:
>313_residues MFFIPIRFIAIALLLLFPFFYSGCVSKPVEKRLQVVASIAPLAYFAEKIGGGYVTVSVMVPPGGNPHTYEPTPRQMSMLG SAKLFIKAGSGVEFELDLMQKIMSMYPVLRICNAASGIHLKPAEHDGEHSERHDYPDEHSERHDYPDEHRHGLVDPHYWL SPRNALVIAENVERSLIEADPERTVFYQANADRLKQELHGLSSEIHVKLASVSNRRFLVFHPAWGYYASDFALEQIAAEE EGKTLTPRQLGRVIQKARTNGIRVVFVSPQFSTVQAETIAREIGGVTRAVDPLAFEYQENLLRATDAFKGGMQ
Sequences:
>Translated_313_residues MFFIPIRFIAIALLLLFPFFYSGCVSKPVEKRLQVVASIAPLAYFAEKIGGGYVTVSVMVPPGGNPHTYEPTPRQMSMLG SAKLFIKAGSGVEFELDLMQKIMSMYPVLRICNAASGIHLKPAEHDGEHSERHDYPDEHSERHDYPDEHRHGLVDPHYWL SPRNALVIAENVERSLIEADPERTVFYQANADRLKQELHGLSSEIHVKLASVSNRRFLVFHPAWGYYASDFALEQIAAEE EGKTLTPRQLGRVIQKARTNGIRVVFVSPQFSTVQAETIAREIGGVTRAVDPLAFEYQENLLRATDAFKGGMQ >Mature_313_residues MFFIPIRFIAIALLLLFPFFYSGCVSKPVEKRLQVVASIAPLAYFAEKIGGGYVTVSVMVPPGGNPHTYEPTPRQMSMLG SAKLFIKAGSGVEFELDLMQKIMSMYPVLRICNAASGIHLKPAEHDGEHSERHDYPDEHSERHDYPDEHRHGLVDPHYWL SPRNALVIAENVERSLIEADPERTVFYQANADRLKQELHGLSSEIHVKLASVSNRRFLVFHPAWGYYASDFALEQIAAEE EGKTLTPRQLGRVIQKARTNGIRVVFVSPQFSTVQAETIAREIGGVTRAVDPLAFEYQENLLRATDAFKGGMQ
Specific function: Part of the ATP-driven transport system AdcABC for zinc [H]
COG id: COG0803
COG function: function code P; ABC-type metal ion transport system, periplasmic component/surface adhesin
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the bacterial solute-binding protein 9 family [H]
Homologues:
Organism=Escherichia coli, GI87081990, Length=262, Percent_Identity=27.0992366412214, Blast_Score=92, Evalue=4e-20,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR006127 - InterPro: IPR006129 - InterPro: IPR012674 - InterPro: IPR011038 - InterPro: IPR006128 - InterPro: IPR015304 [H]
Pfam domain/function: PF01297 SBP_bac_9; PF09223 YodA [H]
EC number: NA
Molecular weight: Translated: 35138; Mature: 35138
Theoretical pI: Translated: 6.71; Mature: 6.71
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MFFIPIRFIAIALLLLFPFFYSGCVSKPVEKRLQVVASIAPLAYFAEKIGGGYVTVSVMV CEEEHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEEE PPGGNPHTYEPTPRQMSMLGSAKLFIKAGSGVEFELDLMQKIMSMYPVLRICNAASGIHL CCCCCCCCCCCCHHHHHHHCCEEEEEEECCCCEEEHHHHHHHHHHHHHHHHHHCCCCCEE KPAEHDGEHSERHDYPDEHSERHDYPDEHRHGLVDPHYWLSPRNALVIAENVERSLIEAD CCCCCCCCCCCCCCCCCCCCCCCCCCHHHCCCCCCCCCEECCCCEEEEECHHHHHHHHCC PERTVFYQANADRLKQELHGLSSEIHVKLASVSNRRFLVFHPAWGYYASDFALEQIAAEE CCCEEEEECCHHHHHHHHHCCCCEEEEEEEECCCCEEEEEECCCCCHHHHHHHHHHHHHC EGKTLTPRQLGRVIQKARTNGIRVVFVSPQFSTVQAETIAREIGGVTRAVDPLAFEYQEN CCCCCCHHHHHHHHHHHCCCCEEEEEECCCCCHHHHHHHHHHHCCHHHHHCHHHHHHHHH LLRATDAFKGGMQ HHHHHHHHCCCCC >Mature Secondary Structure MFFIPIRFIAIALLLLFPFFYSGCVSKPVEKRLQVVASIAPLAYFAEKIGGGYVTVSVMV CEEEHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEEE PPGGNPHTYEPTPRQMSMLGSAKLFIKAGSGVEFELDLMQKIMSMYPVLRICNAASGIHL CCCCCCCCCCCCHHHHHHHCCEEEEEEECCCCEEEHHHHHHHHHHHHHHHHHHCCCCCEE KPAEHDGEHSERHDYPDEHSERHDYPDEHRHGLVDPHYWLSPRNALVIAENVERSLIEAD CCCCCCCCCCCCCCCCCCCCCCCCCCHHHCCCCCCCCCEECCCCEEEEECHHHHHHHHCC PERTVFYQANADRLKQELHGLSSEIHVKLASVSNRRFLVFHPAWGYYASDFALEQIAAEE CCCEEEEECCHHHHHHHHHCCCCEEEEEEEECCCCEEEEEECCCCCHHHHHHHHHHHHHC EGKTLTPRQLGRVIQKARTNGIRVVFVSPQFSTVQAETIAREIGGVTRAVDPLAFEYQEN CCCCCCHHHHHHHHHHHCCCCEEEEEECCCCCHHHHHHHHHHHCCHHHHHCHHHHHHHHH LLRATDAFKGGMQ HHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: Zn (II) [Periplasm]; H2O; ATP [C]
Specific reaction: Zn (II) [Periplasm] + H2O + ATP = Zn (II) [Cytoplasm] + ADP + phosphate [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 11296296 [H]