| Definition | Chlorobium phaeobacteroides DSM 266 chromosome, complete genome. |
|---|---|
| Accession | NC_008639 |
| Length | 3,133,902 |
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The map label for this gene is 119358235
Identifier: 119358235
GI number: 119358235
Start: 2839407
End: 2840765
Strand: Direct
Name: 119358235
Synonym: Cpha266_2467
Alternate gene names: NA
Gene position: 2839407-2840765 (Clockwise)
Preceding gene: 119358234
Following gene: 119358241
Centisome position: 90.6
GC content: 49.23
Gene sequence:
>1359_bases ATGAAGAGAACCATTCATCGGGTGAGCTGCCGGATCTTGCTGTGCATCCTGACCATGCTCTCTATCTTCTTTTTTTCCGG GCATGCCTACGCTGAAACGAATCATGACCATATGTTCCTTCGCGTTTCAGTCAGCAACGATCGTCCTTGTGTCGGCGAGG AAATTCTCTTGACCTATACCCTGTATTTTTACGGAAACGCCCCTCGAATCGAGGACGCGGCAAACCCTTCACTGCAAGGC CTGTGGGCTCGTGAAATCGATCCCGGACGTCACATCCGAAGCGTTGCCGCGAAACTTGACGGCGTATCCTGGCGGAGCGC CGTTATCCGCCAATATAAACTTGCTCCGATGAAGCAAGGAAAAATCCTGCTGTCGAACTACCGACTGAAATGCCTTATTC CGCAAGAGATTGATAAACGGGGAACCATCGCTCCCGATAAAGAGATCACGATAACCGCTCCGGATATCACGATCAATGTC AAACCCCTTCCTGAACCGGCACCGGATGCGTACAAAGGCGCTGTCGGTTCCTTTAAACTTTCGCTCACATCTGACAGAAA AACGGTTCAGGAAGGCGACCCGTTTCACCTGATTCTCACCATCAGCGGCAAAGGAAATCTCCTGACTCTCCTGGCACCCG AAATCTTCCTTCCACAAGCCTTTCGTCAAAAAGAGAGCAAGATAGCCGCCGAACTCGACAAGAACTCCGCGCTCTCCTCC GGCTCCCTCGTGACGACCATGACCGTCTATGCAGACACATCCGGAAGCATGCTGATTTCTCCCGTTCGCTTTGTTTTTTT TGATCCGGAAAAAAACAGGTACAAGAGCATCAGCTCCTCACCTTTCACGGTTACCGTCTTGCAAAAAAACACCCCTTTGG AGCAGAAAAACAGATTTGACCAGGGGGAAATACGAGAAGAATTACCAAACAAACAACAACCCCTGAGTGATTCGCTTACG ATGAAACTGTTGATCATCGTCCTTCTCTGTGCAGGAGTTGCCGCAGCCATCGCGCTCCTGAAAATATCGCCCAAACTCAG AAAAAAAGGAAACAAAACAGAAAAAGAGCCAATAAGAGTACCATCCTCACCCGAAGCAATGAAAGAGCTGTTACAGAATA CCCTTGAAAAAATGGGCATAGGCAACCCGAAAAGCCTGACGAAAAAGGAGCTCTGTGAAGCCATGAAAGCTGCCTCGCTC TCCGATGAAATATGCGGAATGCTTGCCGACCTGCTTGAAAATCTCGACAAGGAGCTTTACAGCCCTATCCAGCAAAAAGA GCATGTCTCTCTTCAGAAGAAAACGGCAGATCTACTTCACCAGTTGCAGAAACCGGCACAAAACGTACCAAAGCGCTAA
Upstream 100 bases:
>100_bases CTGAACGTCATGAGGGAAAAAAATATCCACCAGACGTTGATCGATACTGTTGCCGCCGCCGCTGCCCGTTCAAGGGAACT CATGCAATAAACCCTGTCCC
Downstream 100 bases:
>100_bases GCCATTTATCATATCAAGGCTCATCACAACCCCGCACGTTCCAGAGAGGAAAACGTTGCCCACGGCAGCATTGTACAATT GAGTGTTGTGCCAACAGGAA
Product: hypothetical protein
Products: NA
Alternate protein names: Aerotolerance-Related Exported Protein; Aerotolerance-Related Protein BatD; BatD/BatE Protein; Tetratricopeptide Repeat Protein
Number of amino acids: Translated: 452; Mature: 452
Protein sequence:
>452_residues MKRTIHRVSCRILLCILTMLSIFFFSGHAYAETNHDHMFLRVSVSNDRPCVGEEILLTYTLYFYGNAPRIEDAANPSLQG LWAREIDPGRHIRSVAAKLDGVSWRSAVIRQYKLAPMKQGKILLSNYRLKCLIPQEIDKRGTIAPDKEITITAPDITINV KPLPEPAPDAYKGAVGSFKLSLTSDRKTVQEGDPFHLILTISGKGNLLTLLAPEIFLPQAFRQKESKIAAELDKNSALSS GSLVTTMTVYADTSGSMLISPVRFVFFDPEKNRYKSISSSPFTVTVLQKNTPLEQKNRFDQGEIREELPNKQQPLSDSLT MKLLIIVLLCAGVAAAIALLKISPKLRKKGNKTEKEPIRVPSSPEAMKELLQNTLEKMGIGNPKSLTKKELCEAMKAASL SDEICGMLADLLENLDKELYSPIQQKEHVSLQKKTADLLHQLQKPAQNVPKR
Sequences:
>Translated_452_residues MKRTIHRVSCRILLCILTMLSIFFFSGHAYAETNHDHMFLRVSVSNDRPCVGEEILLTYTLYFYGNAPRIEDAANPSLQG LWAREIDPGRHIRSVAAKLDGVSWRSAVIRQYKLAPMKQGKILLSNYRLKCLIPQEIDKRGTIAPDKEITITAPDITINV KPLPEPAPDAYKGAVGSFKLSLTSDRKTVQEGDPFHLILTISGKGNLLTLLAPEIFLPQAFRQKESKIAAELDKNSALSS GSLVTTMTVYADTSGSMLISPVRFVFFDPEKNRYKSISSSPFTVTVLQKNTPLEQKNRFDQGEIREELPNKQQPLSDSLT MKLLIIVLLCAGVAAAIALLKISPKLRKKGNKTEKEPIRVPSSPEAMKELLQNTLEKMGIGNPKSLTKKELCEAMKAASL SDEICGMLADLLENLDKELYSPIQQKEHVSLQKKTADLLHQLQKPAQNVPKR >Mature_452_residues MKRTIHRVSCRILLCILTMLSIFFFSGHAYAETNHDHMFLRVSVSNDRPCVGEEILLTYTLYFYGNAPRIEDAANPSLQG LWAREIDPGRHIRSVAAKLDGVSWRSAVIRQYKLAPMKQGKILLSNYRLKCLIPQEIDKRGTIAPDKEITITAPDITINV KPLPEPAPDAYKGAVGSFKLSLTSDRKTVQEGDPFHLILTISGKGNLLTLLAPEIFLPQAFRQKESKIAAELDKNSALSS GSLVTTMTVYADTSGSMLISPVRFVFFDPEKNRYKSISSSPFTVTVLQKNTPLEQKNRFDQGEIREELPNKQQPLSDSLT MKLLIIVLLCAGVAAAIALLKISPKLRKKGNKTEKEPIRVPSSPEAMKELLQNTLEKMGIGNPKSLTKKELCEAMKAASL SDEICGMLADLLENLDKELYSPIQQKEHVSLQKKTADLLHQLQKPAQNVPKR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 50375; Mature: 50375
Theoretical pI: Translated: 9.75; Mature: 9.75
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 4.0 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 4.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKRTIHRVSCRILLCILTMLSIFFFSGHAYAETNHDHMFLRVSVSNDRPCVGEEILLTYT CCCHHHHHHHHHHHHHHHHHHHHHHCCCEEEECCCCEEEEEEEECCCCCCCCCCEEEEEE LYFYGNAPRIEDAANPSLQGLWAREIDPGRHIRSVAAKLDGVSWRSAVIRQYKLAPMKQG EEEECCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCCC KILLSNYRLKCLIPQEIDKRGTIAPDKEITITAPDITINVKPLPEPAPDAYKGAVGSFKL CEEEECCEEEEECCHHHCCCCCCCCCCCEEEECCCEEEEEEECCCCCCHHHHCCCCEEEE SLTSDRKTVQEGDPFHLILTISGKGNLLTLLAPEIFLPQAFRQKESKIAAELDKNSALSS EECCCCHHHHCCCCEEEEEEECCCCCEEEEECCHHHCCHHHHHHHHHHHHHHCCCCCCCC GSLVTTMTVYADTSGSMLISPVRFVFFDPEKNRYKSISSSPFTVTVLQKNTPLEQKNRFD CCEEEEEEEEECCCCCEEEEEEEEEEECCCCHHHHCCCCCCEEEEEEECCCCHHHHCCCC QGEIREELPNKQQPLSDSLTMKLLIIVLLCAGVAAAIALLKISPKLRKKGNKTEKEPIRV CHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHCCCCCCCCCCCC PSSPEAMKELLQNTLEKMGIGNPKSLTKKELCEAMKAASLSDEICGMLADLLENLDKELY CCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHH SPIQQKEHVSLQKKTADLLHQLQKPAQNVPKR HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC >Mature Secondary Structure MKRTIHRVSCRILLCILTMLSIFFFSGHAYAETNHDHMFLRVSVSNDRPCVGEEILLTYT CCCHHHHHHHHHHHHHHHHHHHHHHCCCEEEECCCCEEEEEEEECCCCCCCCCCEEEEEE LYFYGNAPRIEDAANPSLQGLWAREIDPGRHIRSVAAKLDGVSWRSAVIRQYKLAPMKQG EEEECCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCCC KILLSNYRLKCLIPQEIDKRGTIAPDKEITITAPDITINVKPLPEPAPDAYKGAVGSFKL CEEEECCEEEEECCHHHCCCCCCCCCCCEEEECCCEEEEEEECCCCCCHHHHCCCCEEEE SLTSDRKTVQEGDPFHLILTISGKGNLLTLLAPEIFLPQAFRQKESKIAAELDKNSALSS EECCCCHHHHCCCCEEEEEEECCCCCEEEEECCHHHCCHHHHHHHHHHHHHHCCCCCCCC GSLVTTMTVYADTSGSMLISPVRFVFFDPEKNRYKSISSSPFTVTVLQKNTPLEQKNRFD CCEEEEEEEEECCCCCEEEEEEEEEEECCCCHHHHCCCCCCEEEEEEECCCCHHHHCCCC QGEIREELPNKQQPLSDSLTMKLLIIVLLCAGVAAAIALLKISPKLRKKGNKTEKEPIRV CHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHCCCCCCCCCCCC PSSPEAMKELLQNTLEKMGIGNPKSLTKKELCEAMKAASLSDEICGMLADLLENLDKELY CCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHH SPIQQKEHVSLQKKTADLLHQLQKPAQNVPKR HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA