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The map label for this gene is ybcL [H]

Identifier: 119358199

GI number: 119358199

Start: 2806054

End: 2806539

Strand: Reverse

Name: ybcL [H]

Synonym: Cpha266_2431

Alternate gene names: 119358199

Gene position: 2806539-2806054 (Counterclockwise)

Preceding gene: 119358200

Following gene: 119358197

Centisome position: 89.55

GC content: 51.85

Gene sequence:

>486_bases
ATGCTCTATGAAAAAGGAGAGATGATGAGAGCAAGAATAGTTGGACTCTGCGTCATGTTGTTGATGACTGTGCAGGTGAC
AGGCCGTGCTGCCGGATTCACGCTCACTGGTCCTGGAATGGGCGAAAGGCTTACGAAAGCCGAGGAATATGCGGGTTTCG
GGTGCAACGGCGGTAACATCTCCCCCGAGTTGCGATGGACGCAGCCTCCGGCAGGTACCAAAAGTTTCGCCGTCACCATG
TTTGATCCCGATAAAAAGTTCGCACCTGAAGGCAGTGTTCAGAGCTTGACCGATTTCGGAAAATCGGGCTTCGGAGCTCC
ATGTCCTCCCAAAGGAGACAAACCGCATGCCTGTGTGTTTACGATTTATGCGCTCGATACGGAAAAACTCGATGCCGACG
AGATGAGCCTTCCGTCGGAAGTCATGGCACAAATTCAGAAACACCTGTCAGGCAAAGCGTCATGCAGATCGTATTATCAG
CGATGA

Upstream 100 bases:

>100_bases
GGCGACAGGGGTTCCTGAAGCGCAGTAAATCTGCGTAGCAATGTAACACCACTCCTGACAGCTTCTCAAATCCGGTTCTT
TGATGAGGTGTCGTATCGAT

Downstream 100 bases:

>100_bases
AGGATCTCACCAGGATTGTCGAACTGAAAAGGACGGCGGGGCTTTTCATGTTATTCTGCGACAGGTTATGACGTTGGTAA
GCGACAAGGTACAGTTTATG

Product: PBP family phospholipid-binding protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 161; Mature: 161

Protein sequence:

>161_residues
MLYEKGEMMRARIVGLCVMLLMTVQVTGRAAGFTLTGPGMGERLTKAEEYAGFGCNGGNISPELRWTQPPAGTKSFAVTM
FDPDKKFAPEGSVQSLTDFGKSGFGAPCPPKGDKPHACVFTIYALDTEKLDADEMSLPSEVMAQIQKHLSGKASCRSYYQ
R

Sequences:

>Translated_161_residues
MLYEKGEMMRARIVGLCVMLLMTVQVTGRAAGFTLTGPGMGERLTKAEEYAGFGCNGGNISPELRWTQPPAGTKSFAVTM
FDPDKKFAPEGSVQSLTDFGKSGFGAPCPPKGDKPHACVFTIYALDTEKLDADEMSLPSEVMAQIQKHLSGKASCRSYYQ
R
>Mature_161_residues
MLYEKGEMMRARIVGLCVMLLMTVQVTGRAAGFTLTGPGMGERLTKAEEYAGFGCNGGNISPELRWTQPPAGTKSFAVTM
FDPDKKFAPEGSVQSLTDFGKSGFGAPCPPKGDKPHACVFTIYALDTEKLDADEMSLPSEVMAQIQKHLSGKASCRSYYQ
R

Specific function: Unknown

COG id: COG1881

COG function: function code R; Phospholipid-binding protein

Gene ontology:

Cell location: Periplasm [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0098 family [H]

Homologues:

Organism=Escherichia coli, GI1786757, Length=160, Percent_Identity=38.75, Blast_Score=108, Evalue=2e-25,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR008914
- InterPro:   IPR005247 [H]

Pfam domain/function: PF01161 PBP [H]

EC number: NA

Molecular weight: Translated: 17442; Mature: 17442

Theoretical pI: Translated: 7.84; Mature: 7.84

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.1 %Cys     (Translated Protein)
5.6 %Met     (Translated Protein)
8.7 %Cys+Met (Translated Protein)
3.1 %Cys     (Mature Protein)
5.6 %Met     (Mature Protein)
8.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLYEKGEMMRARIVGLCVMLLMTVQVTGRAAGFTLTGPGMGERLTKAEEYAGFGCNGGNI
CCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEECCCCCHHHHHHHHHCCCCCCCCCC
SPELRWTQPPAGTKSFAVTMFDPDKKFAPEGSVQSLTDFGKSGFGAPCPPKGDKPHACVF
CCCEEECCCCCCCCEEEEEEECCCCCCCCCCCHHHHHHHCCCCCCCCCCCCCCCCCEEEE
TIYALDTEKLDADEMSLPSEVMAQIQKHLSGKASCRSYYQR
EEEECCCCCCCCHHCCCCHHHHHHHHHHHCCHHHHHHHHCC
>Mature Secondary Structure
MLYEKGEMMRARIVGLCVMLLMTVQVTGRAAGFTLTGPGMGERLTKAEEYAGFGCNGGNI
CCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEECCCCCHHHHHHHHHCCCCCCCCCC
SPELRWTQPPAGTKSFAVTMFDPDKKFAPEGSVQSLTDFGKSGFGAPCPPKGDKPHACVF
CCCEEECCCCCCCCEEEEEEECCCCCCCCCCCHHHHHHHCCCCCCCCCCCCCCCCCEEEE
TIYALDTEKLDADEMSLPSEVMAQIQKHLSGKASCRSYYQR
EEEECCCCCCCCHHCCCCHHHHHHHHHHHCCHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9278503; 11439028 [H]