| Definition | Chlorobium phaeobacteroides DSM 266 chromosome, complete genome. |
|---|---|
| Accession | NC_008639 |
| Length | 3,133,902 |
Click here to switch to the map view.
The map label for this gene is 119358197
Identifier: 119358197
GI number: 119358197
Start: 2803480
End: 2804814
Strand: Reverse
Name: 119358197
Synonym: Cpha266_2429
Alternate gene names: NA
Gene position: 2804814-2803480 (Counterclockwise)
Preceding gene: 119358199
Following gene: 119358196
Centisome position: 89.5
GC content: 49.74
Gene sequence:
>1335_bases ATGGCTGACGGGGTCGGACGCTTGCAGCTAAATAGGGGAAAGGTCTTTTCTTTTTATTTGATGAAAAAAATACTGTTTCT GTCGGTCAACTATCCGCCAATGCTCACGGCGGGTTCTGCAAGGGCTTCAAGGTTTGTCGTAAAGTTGCCTGAACTTGGAT GGGCGCCTCTTGTTGTGGCGCCTGCCGATATAGCCTGGGATGAGGATGGCAAAACCCGGGCTATGTCGGAGAGTTCCGAA TTTAACGGGATTTACCGAACCGGGGAACTTGTGGATGCTGCGATGTTTGGTTCTGAACGATCTGCGCTGCTGTTGCAGGG TTTGAGCGCACATCCCGGGACAGCGTCGCCATTTCGCAGGATTACAGGGATGCTTTCCGGAGTGAATCTTGTTTCGGGCT GGGAAAAGCGGGCCCTTTCGGTCGTTACGGAAATTATTCAAAGGCATGATTCTGTCGATGCGATCTATGCACAGGGACCG CCAGAGGCCTCGCTTGTACTTGCGCTTGAGCTATCTGAAAAACATGGGGTTCCGGTACTTTTCGATCTTGTGGCTCCTCT TGATAGAACAGCCTCGCAGGGGGCCCGCCCGAGCGATCTCGCTAAAATCGAGGAGCGAGTGCTGACTTCCGGTCACACAA TCATGGTTCCCACAAGAGCGTTGAAAGAGTATTTTCTGAAAAAATATTTCGGAAAAGCGACGCATGATGATATCTGGATT GTTCAGGATTTCTGTTACGGGCAGGGAGATGTGAAGTCAGGGGCAAAACACGATTCAGTGGAATCAGTGTCGGTGACTAT TCTCCTTGAAACAGTTTCAGTTAAAGAAATGAAACTGTTTATGTCGATATTTGCCGGGTTTATGCATCACGAAGGCTCTC TTTCGGGTAGATCCGGTATTCGTTTTATTGGTGGCGATGGTGAGGCTGTTGCAAAATATGCCAGAAAATATATGCCGCAA ACATCCTGTTTATGGGGCCCACGGTGTAACACAGATGAGGAGCTTGCCTGTATCCGCCGGAGCGATCTGTTTGTCGTGGT GCTTGGTCAGCATGAATCATCGATGCTTGTGCTTCCCGATCGGGTTGTTGATGCTCTTTGCATGAAGAAAAAGGTTGTTA TTATCGGACCGGATGGGCCTGCCGCACAGGTTGCGCGCGAAGCAGGGGGTTTTTCTGCGTCTCTTCATGATTCCTCCGCA GTTGTTCAGGCGCTCAATTCTTCATTTGATGATCGGCAGGGAATGGACGGCAAAGCGGTACTGCCGGATAGATTGTCGGC TTCAGGCGCTTTGAGAGATCTTTCAAAAATTCTTGCCTATATGCTTCCTGTTTGA
Upstream 100 bases:
>100_bases AAAAGTGGTTACATTTAAATGCTTCGTTTAGTGGAGTATTCGAAAAAAAAAATAATTTGCCGGCGTTTTTTTTATGAATT TCAGATAACGGCCGGCTGAT
Downstream 100 bases:
>100_bases AACGAATTCGGACACGGGAGGCTTCATCGAATTGCCATACATCTCTTTATGTTGTTTTTTTGTCTTTAAAAAGAGAAAAA TGCTGTTCACGATTTTGTTT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 444; Mature: 443
Protein sequence:
>444_residues MADGVGRLQLNRGKVFSFYLMKKILFLSVNYPPMLTAGSARASRFVVKLPELGWAPLVVAPADIAWDEDGKTRAMSESSE FNGIYRTGELVDAAMFGSERSALLLQGLSAHPGTASPFRRITGMLSGVNLVSGWEKRALSVVTEIIQRHDSVDAIYAQGP PEASLVLALELSEKHGVPVLFDLVAPLDRTASQGARPSDLAKIEERVLTSGHTIMVPTRALKEYFLKKYFGKATHDDIWI VQDFCYGQGDVKSGAKHDSVESVSVTILLETVSVKEMKLFMSIFAGFMHHEGSLSGRSGIRFIGGDGEAVAKYARKYMPQ TSCLWGPRCNTDEELACIRRSDLFVVVLGQHESSMLVLPDRVVDALCMKKKVVIIGPDGPAAQVAREAGGFSASLHDSSA VVQALNSSFDDRQGMDGKAVLPDRLSASGALRDLSKILAYMLPV
Sequences:
>Translated_444_residues MADGVGRLQLNRGKVFSFYLMKKILFLSVNYPPMLTAGSARASRFVVKLPELGWAPLVVAPADIAWDEDGKTRAMSESSE FNGIYRTGELVDAAMFGSERSALLLQGLSAHPGTASPFRRITGMLSGVNLVSGWEKRALSVVTEIIQRHDSVDAIYAQGP PEASLVLALELSEKHGVPVLFDLVAPLDRTASQGARPSDLAKIEERVLTSGHTIMVPTRALKEYFLKKYFGKATHDDIWI VQDFCYGQGDVKSGAKHDSVESVSVTILLETVSVKEMKLFMSIFAGFMHHEGSLSGRSGIRFIGGDGEAVAKYARKYMPQ TSCLWGPRCNTDEELACIRRSDLFVVVLGQHESSMLVLPDRVVDALCMKKKVVIIGPDGPAAQVAREAGGFSASLHDSSA VVQALNSSFDDRQGMDGKAVLPDRLSASGALRDLSKILAYMLPV >Mature_443_residues ADGVGRLQLNRGKVFSFYLMKKILFLSVNYPPMLTAGSARASRFVVKLPELGWAPLVVAPADIAWDEDGKTRAMSESSEF NGIYRTGELVDAAMFGSERSALLLQGLSAHPGTASPFRRITGMLSGVNLVSGWEKRALSVVTEIIQRHDSVDAIYAQGPP EASLVLALELSEKHGVPVLFDLVAPLDRTASQGARPSDLAKIEERVLTSGHTIMVPTRALKEYFLKKYFGKATHDDIWIV QDFCYGQGDVKSGAKHDSVESVSVTILLETVSVKEMKLFMSIFAGFMHHEGSLSGRSGIRFIGGDGEAVAKYARKYMPQT SCLWGPRCNTDEELACIRRSDLFVVVLGQHESSMLVLPDRVVDALCMKKKVVIIGPDGPAAQVAREAGGFSASLHDSSAV VQALNSSFDDRQGMDGKAVLPDRLSASGALRDLSKILAYMLPV
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 48168; Mature: 48037
Theoretical pI: Translated: 7.31; Mature: 7.31
Prosite motif: PS00237 G_PROTEIN_RECEP_F1_1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 3.4 %Met (Translated Protein) 4.5 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 3.2 %Met (Mature Protein) 4.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MADGVGRLQLNRGKVFSFYLMKKILFLSVNYPPMLTAGSARASRFVVKLPELGWAPLVVA CCCCCCEEEECCCCCHHHHHHHHHHHEECCCCCCEECCCCCCCEEEEECCCCCCCCEEEE PADIAWDEDGKTRAMSESSEFNGIYRTGELVDAAMFGSERSALLLQGLSAHPGTASPFRR CCCCEECCCCCCHHCCCCCCCCCEEECHHHHHHHHHCCCCCCHHEECCCCCCCCCHHHHH ITGMLSGVNLVSGWEKRALSVVTEIIQRHDSVDAIYAQGPPEASLVLALELSEKHGVPVL HHHHHHCCHHHHHHHHHHHHHHHHHHHHCCCCCEEEECCCCCCEEEEEEEECCCCCCCCH FDLVAPLDRTASQGARPSDLAKIEERVLTSGHTIMVPTRALKEYFLKKYFGKATHDDIWI HHHHCCHHHHHHCCCCHHHHHHHHHHHHHCCCEEEECHHHHHHHHHHHHHCCCCCCCEEE VQDFCYGQGDVKSGAKHDSVESVSVTILLETVSVKEMKLFMSIFAGFMHHEGSLSGRSGI EEEHHCCCCCCCCCCCCCCCCEEEEEEEEEEHHHHHHHHHHHHHHHHHHCCCCCCCCCCE RFIGGDGEAVAKYARKYMPQTSCLWGPRCNTDEELACIRRSDLFVVVLGQHESSMLVLPD EEECCCHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHEECCCEEEEEECCCCCCEEEECH RVVDALCMKKKVVIIGPDGPAAQVAREAGGFSASLHDSSAVVQALNSSFDDRQGMDGKAV HHHHHHHHHCEEEEECCCCCHHHHHHHHCCCEEECCCHHHHHHHHHCCCCHHCCCCCCCC LPDRLSASGALRDLSKILAYMLPV CCCHHCCCHHHHHHHHHHHHHCCC >Mature Secondary Structure ADGVGRLQLNRGKVFSFYLMKKILFLSVNYPPMLTAGSARASRFVVKLPELGWAPLVVA CCCCCEEEECCCCCHHHHHHHHHHHEECCCCCCEECCCCCCCEEEEECCCCCCCCEEEE PADIAWDEDGKTRAMSESSEFNGIYRTGELVDAAMFGSERSALLLQGLSAHPGTASPFRR CCCCEECCCCCCHHCCCCCCCCCEEECHHHHHHHHHCCCCCCHHEECCCCCCCCCHHHHH ITGMLSGVNLVSGWEKRALSVVTEIIQRHDSVDAIYAQGPPEASLVLALELSEKHGVPVL HHHHHHCCHHHHHHHHHHHHHHHHHHHHCCCCCEEEECCCCCCEEEEEEEECCCCCCCCH FDLVAPLDRTASQGARPSDLAKIEERVLTSGHTIMVPTRALKEYFLKKYFGKATHDDIWI HHHHCCHHHHHHCCCCHHHHHHHHHHHHHCCCEEEECHHHHHHHHHHHHHCCCCCCCEEE VQDFCYGQGDVKSGAKHDSVESVSVTILLETVSVKEMKLFMSIFAGFMHHEGSLSGRSGI EEEHHCCCCCCCCCCCCCCCCEEEEEEEEEEHHHHHHHHHHHHHHHHHHCCCCCCCCCCE RFIGGDGEAVAKYARKYMPQTSCLWGPRCNTDEELACIRRSDLFVVVLGQHESSMLVLPD EEECCCHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHEECCCEEEEEECCCCCCEEEECH RVVDALCMKKKVVIIGPDGPAAQVAREAGGFSASLHDSSAVVQALNSSFDDRQGMDGKAV HHHHHHHHHCEEEEECCCCCHHHHHHHHCCCEEECCCHHHHHHHHHCCCCHHCCCCCCCC LPDRLSASGALRDLSKILAYMLPV CCCHHCCCHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA