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The map label for this gene is gidB

Identifier: 119358162

GI number: 119358162

Start: 2782699

End: 2783367

Strand: Direct

Name: gidB

Synonym: Cpha266_2394

Alternate gene names: 119358162

Gene position: 2782699-2783367 (Clockwise)

Preceding gene: 119358160

Following gene: 119358198

Centisome position: 88.79

GC content: 44.39

Gene sequence:

>669_bases
ATGGAGACGACGAATAAAGCCAACACGATGATGGCAGAGCTTAAAACCCTGTGCAATAAGGATAATATTGTCCTCTCTCT
CTCTCAGTATGAAAAACTTGTCGGCTATGCCCTGCTTCTTGAAGATTGGAATAACAAAATAAATCTTATAAGCCGCAAGG
AAGACGCGCCGATACTTATCAAGCATGTGTTTCACTCTCTCCTGATCGGGCTTTTTCATCAGTTTTCTTCAAGTGAAAAA
GTGCTCGACCTTGGAACCGGAGGCGGACTGCCTGGCATTCCTCTGGCTATCGCTTGGCCGGATACGCAGTTTCTTCTTGT
AGATGCAACGGGGAAAAAAATAGCAGCCTGCCAGTCTATGATAAAATCACTTGATATAAAAAATGCAGTGGCTGTTCACT
CGAGGGTTGAAGAACTTAAAGGGATGAGTTTTGATACGGTGCTGAGCAGGCAGGTTGCGCAGCTTGAACAGTTATGCTCC
TATGCATCAAAAATTCTCAAGCCTGGAGGAAGGCTTATCTGCCTGAAAGGCGGGAATCTCGATCATGAAATCAAAAAAGC
TCTGGCTGGTAAAAAAGAGAAAGGTTCGTTCCCGAGTGTTGTGGAGCAATTTCCTGTAAGCGGTTACAGCCCGTGTTTTA
CTGAAAAACATATAGTCATTGCACGTTGA

Upstream 100 bases:

>100_bases
ACACCTTAAACAGCCCGGCTATTTCAATTGTTTGATTTGCCTTTGATCTCAAAATGTCGTTTTTTTATTGAACGACTGTA
AACGACCTTAATGAAAATGT

Downstream 100 bases:

>100_bases
GCCTGTAGGCGAAACATGCAATGACTATGAAAAACGAAGGCTTGGGTACCAGATAACCGGCACTTCTCTCTATCTGCTGA
CTCTCAGGAAGCGACTTCAG

Product: 16S rRNA methyltransferase GidB

Products: NA

Alternate protein names: 16S rRNA 7-methylguanosine methyltransferase; 16S rRNA m7G methyltransferase

Number of amino acids: Translated: 222; Mature: 222

Protein sequence:

>222_residues
METTNKANTMMAELKTLCNKDNIVLSLSQYEKLVGYALLLEDWNNKINLISRKEDAPILIKHVFHSLLIGLFHQFSSSEK
VLDLGTGGGLPGIPLAIAWPDTQFLLVDATGKKIAACQSMIKSLDIKNAVAVHSRVEELKGMSFDTVLSRQVAQLEQLCS
YASKILKPGGRLICLKGGNLDHEIKKALAGKKEKGSFPSVVEQFPVSGYSPCFTEKHIVIAR

Sequences:

>Translated_222_residues
METTNKANTMMAELKTLCNKDNIVLSLSQYEKLVGYALLLEDWNNKINLISRKEDAPILIKHVFHSLLIGLFHQFSSSEK
VLDLGTGGGLPGIPLAIAWPDTQFLLVDATGKKIAACQSMIKSLDIKNAVAVHSRVEELKGMSFDTVLSRQVAQLEQLCS
YASKILKPGGRLICLKGGNLDHEIKKALAGKKEKGSFPSVVEQFPVSGYSPCFTEKHIVIAR
>Mature_222_residues
METTNKANTMMAELKTLCNKDNIVLSLSQYEKLVGYALLLEDWNNKINLISRKEDAPILIKHVFHSLLIGLFHQFSSSEK
VLDLGTGGGLPGIPLAIAWPDTQFLLVDATGKKIAACQSMIKSLDIKNAVAVHSRVEELKGMSFDTVLSRQVAQLEQLCS
YASKILKPGGRLICLKGGNLDHEIKKALAGKKEKGSFPSVVEQFPVSGYSPCFTEKHIVIAR

Specific function: Specifically methylates the N7 position of a guanosine in 16S rRNA

COG id: COG0357

COG function: function code M; Predicted S-adenosylmethionine-dependent methyltransferase involved in bacterial cell division

Gene ontology:

Cell location: Cytoplasm (Potential)

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the methyltransferase superfamily. RNA methyltransferase rsmG family

Homologues:

Organism=Escherichia coli, GI1790179, Length=176, Percent_Identity=34.0909090909091, Blast_Score=108, Evalue=3e-25,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): RSMG_CHLPD (A1BJ05)

Other databases:

- EMBL:   CP000492
- RefSeq:   YP_912806.1
- ProteinModelPortal:   A1BJ05
- SMR:   A1BJ05
- STRING:   A1BJ05
- GeneID:   4568616
- GenomeReviews:   CP000492_GR
- KEGG:   cph:Cpha266_2394
- NMPDR:   fig|290317.7.peg.2509
- eggNOG:   COG0357
- HOGENOM:   HBG308018
- OMA:   HIMDSIV
- ProtClustDB:   PRK00107
- GO:   GO:0005737
- HAMAP:   MF_00074
- InterPro:   IPR003682
- PIRSF:   PIRSF003078
- TIGRFAMs:   TIGR00138

Pfam domain/function: PF02527 GidB

EC number: 2.1.-.-

Molecular weight: Translated: 24367; Mature: 24367

Theoretical pI: Translated: 8.97; Mature: 8.97

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.3 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
4.5 %Cys+Met (Translated Protein)
2.3 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
4.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
METTNKANTMMAELKTLCNKDNIVLSLSQYEKLVGYALLLEDWNNKINLISRKEDAPILI
CCCCCHHHHHHHHHHHHHCCCCEEEEHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCHHH
KHVFHSLLIGLFHQFSSSEKVLDLGTGGGLPGIPLAIAWPDTQFLLVDATGKKIAACQSM
HHHHHHHHHHHHHHHCCCCCEEEECCCCCCCCCCEEEECCCCEEEEEECCCCHHHHHHHH
IKSLDIKNAVAVHSRVEELKGMSFDTVLSRQVAQLEQLCSYASKILKPGGRLICLKGGNL
HHHCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCC
DHEIKKALAGKKEKGSFPSVVEQFPVSGYSPCFTEKHIVIAR
CHHHHHHHCCCCCCCCCHHHHHHCCCCCCCCCCCCCCEEEEC
>Mature Secondary Structure
METTNKANTMMAELKTLCNKDNIVLSLSQYEKLVGYALLLEDWNNKINLISRKEDAPILI
CCCCCHHHHHHHHHHHHHCCCCEEEEHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCHHH
KHVFHSLLIGLFHQFSSSEKVLDLGTGGGLPGIPLAIAWPDTQFLLVDATGKKIAACQSM
HHHHHHHHHHHHHHHCCCCCEEEECCCCCCCCCCEEEECCCCEEEEEECCCCHHHHHHHH
IKSLDIKNAVAVHSRVEELKGMSFDTVLSRQVAQLEQLCSYASKILKPGGRLICLKGGNL
HHHCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCC
DHEIKKALAGKKEKGSFPSVVEQFPVSGYSPCFTEKHIVIAR
CHHHHHHHCCCCCCCCCHHHHHHCCCCCCCCCCCCCCEEEEC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA