| Definition | Chlorobium phaeobacteroides DSM 266 chromosome, complete genome. |
|---|---|
| Accession | NC_008639 |
| Length | 3,133,902 |
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The map label for this gene is gmhB [H]
Identifier: 119358144
GI number: 119358144
Start: 2762086
End: 2762670
Strand: Reverse
Name: gmhB [H]
Synonym: Cpha266_2376
Alternate gene names: 119358144
Gene position: 2762670-2762086 (Counterclockwise)
Preceding gene: 119358145
Following gene: 119358143
Centisome position: 88.15
GC content: 51.11
Gene sequence:
>585_bases ATGCCGAATTACATAAAGGTGCTTTTTCTCGACAGGGACGGTACGATAAACGAAGATACAGGTTCGTATGTTGCAACGCG TGAGCAGTTCCGGCTCATTGAGAGAGCAGGGGAGGCTATCGCGCTTGCAAGGGAAGCAGGCTTCAGAATTGTTGTGGTGA CCAATCAGGCCGGCATTGCCCGCGGCATAGCCACCGTCGGGCAGGTTGAGGATATTCATCTCTACCTGAGCGAGCTGCTC ACCCTGTACAAAACCAGCATTGACGGATGTTATTACTGCCCGTCTCATCCCGATTTTCCCCATCCCGACGACGACCGGTA CATACAGTGTCGCAAGCCGGAAACAGGGATGGTTGATCGAGCCGTTGCGGATTTTCTTGCTGATGGTTTTATTGTCGATC GAAGCAGTTCGTTTTTTATTGGCGACAAGGTTCTGGATGTTGAGTGTGGCTTGCGTGCCGGCTTGCGAACGGTGCTGGTG AGAACCGGCCACAATGAGGAAAAACTGTGCCTTGAGCAACAGATCATTCCGGACTTCATAGCTGATGATCTTTATCAAGC CATTACCGGGTATATTCTTTCGTGA
Upstream 100 bases:
>100_bases GCAGCTTGTTCATGAAGCCATGTCGAAGGATTTTGCCTGGAAAAGCTCGGCAGAGGAGTATGACCAGTTATATCGTCAAC TTCTTGAGCCGTAAACAGGT
Downstream 100 bases:
>100_bases ACCGCCCGCCTCTTGGTGAGGCGGATCTCTTATTCCATGCTGAGCCTATACGTTCACATTCCTTTCTGCCGTACCCGCTG CTCTTATTGCGATTTTTATC
Product: histidinol-phosphate phosphatase family protein
Products: NA
Alternate protein names: D-glycero-D-manno-heptose 1,7-bisphosphate phosphatase [H]
Number of amino acids: Translated: 194; Mature: 193
Protein sequence:
>194_residues MPNYIKVLFLDRDGTINEDTGSYVATREQFRLIERAGEAIALAREAGFRIVVVTNQAGIARGIATVGQVEDIHLYLSELL TLYKTSIDGCYYCPSHPDFPHPDDDRYIQCRKPETGMVDRAVADFLADGFIVDRSSSFFIGDKVLDVECGLRAGLRTVLV RTGHNEEKLCLEQQIIPDFIADDLYQAITGYILS
Sequences:
>Translated_194_residues MPNYIKVLFLDRDGTINEDTGSYVATREQFRLIERAGEAIALAREAGFRIVVVTNQAGIARGIATVGQVEDIHLYLSELL TLYKTSIDGCYYCPSHPDFPHPDDDRYIQCRKPETGMVDRAVADFLADGFIVDRSSSFFIGDKVLDVECGLRAGLRTVLV RTGHNEEKLCLEQQIIPDFIADDLYQAITGYILS >Mature_193_residues PNYIKVLFLDRDGTINEDTGSYVATREQFRLIERAGEAIALAREAGFRIVVVTNQAGIARGIATVGQVEDIHLYLSELLT LYKTSIDGCYYCPSHPDFPHPDDDRYIQCRKPETGMVDRAVADFLADGFIVDRSSSFFIGDKVLDVECGLRAGLRTVLVR TGHNEEKLCLEQQIIPDFIADDLYQAITGYILS
Specific function: Converts the D-glycero-D-manno-heptose 1,7-bisphosphate intermediate into D-glycero-D-manno-heptose 1-phosphate by removing the phosphate group at the C-7 position [H]
COG id: COG0241
COG function: function code E; Histidinol phosphatase and related phosphatases
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the gmhB family [H]
Homologues:
Organism=Escherichia coli, GI1786399, Length=192, Percent_Identity=37.5, Blast_Score=108, Evalue=2e-25,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR023214 - InterPro: IPR006549 - InterPro: IPR006543 - InterPro: IPR013954 [H]
Pfam domain/function: PF08645 PNK3P [H]
EC number: NA
Molecular weight: Translated: 21699; Mature: 21568
Theoretical pI: Translated: 4.51; Mature: 4.51
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.6 %Cys (Translated Protein) 1.0 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 2.6 %Cys (Mature Protein) 0.5 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPNYIKVLFLDRDGTINEDTGSYVATREQFRLIERAGEAIALAREAGFRIVVVTNQAGIA CCCEEEEEEEECCCCCCCCCCCCHHHHHHHHHHHHCCHHEEEHHCCCEEEEEEECCCCHH RGIATVGQVEDIHLYLSELLTLYKTSIDGCYYCPSHPDFPHPDDDRYIQCRKPETGMVDR HHHHHHCCHHHHHHHHHHHHHHHHHCCCCEEECCCCCCCCCCCCCCEEEEECCCCCHHHH AVADFLADGFIVDRSSSFFIGDKVLDVECGLRAGLRTVLVRTGHNEEKLCLEQQIIPDFI HHHHHHHCCEEEECCCCEEECCEEEEECCCCHHCHHEEEEECCCCHHHHHHHHHHHHHHH ADDLYQAITGYILS HHHHHHHHHHHHCC >Mature Secondary Structure PNYIKVLFLDRDGTINEDTGSYVATREQFRLIERAGEAIALAREAGFRIVVVTNQAGIA CCEEEEEEEECCCCCCCCCCCCHHHHHHHHHHHHCCHHEEEHHCCCEEEEEEECCCCHH RGIATVGQVEDIHLYLSELLTLYKTSIDGCYYCPSHPDFPHPDDDRYIQCRKPETGMVDR HHHHHHCCHHHHHHHHHHHHHHHHHCCCCEEECCCCCCCCCCCCCCEEEEECCCCCHHHH AVADFLADGFIVDRSSSFFIGDKVLDVECGLRAGLRTVLVRTGHNEEKLCLEQQIIPDFI HHHHHHHCCEEEECCCCEEECCEEEEECCCCHHCHHEEEEECCCCHHHHHHHHHHHHHHH ADDLYQAITGYILS HHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 12093901 [H]