| Definition | Chlorobium phaeobacteroides DSM 266 chromosome, complete genome. |
|---|---|
| Accession | NC_008639 |
| Length | 3,133,902 |
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The map label for this gene is 119358142
Identifier: 119358142
GI number: 119358142
Start: 2758249
End: 2760894
Strand: Reverse
Name: 119358142
Synonym: Cpha266_2374
Alternate gene names: NA
Gene position: 2760894-2758249 (Counterclockwise)
Preceding gene: 119358143
Following gene: 119358141
Centisome position: 88.1
GC content: 50.23
Gene sequence:
>2646_bases ATGACACATCGGGTAATTAACCGTATTATTGCAGTTATTCTTTTTCTGGTTGCCGAGCTTCTCTATCTCAGAACCATGGC TCCCACTCTCTCTTTCTGGGATTGCGGAGAGTTTATTGCAACAGCTTATACGCTTGGAATTCCTCATCCTCCGGGAGCGC CGCTTTTTCTTCTTTTGGGCAGGCTCTTTTCCATGATTCCCTTTTTCAGCGACATCGGCGCTCGGGTGAACCTTATCAGC ACGCTTGCGAGCTCGGCAACCGTGATGTTGACCTATCTCATCACGCTCCGATTTATTATTCTGTACCGCAAAAGCGATCC TGATGGCTGGAGTTCGTCTGAAAAGGTATCTGCATATGGAAGTTCCGTTATCGCGGCGCTTGCCCTTGCTTTTTCCGACA GTTTCTGGTTCAATGCGGTTGAAGCGGAAGTGTATGCCCTCTCATCGCTTTTTACGGCGCTGGTTACATGGCTGATGCTT CGCTGGTATGACGATGATCCACTTCCGGGCAATGAACGATGGCTTATGGCGGTCATGTACATTATCGGTCTCTCAATCGG AGTGCATCTGCTCAGTCTTCTCGCCCTTTTCGCGGTAGCTATGGTGTACTGCTTTAAAAAATATGAGGTAACCCCGCGCT CTGTCGCCTTATTTGTCGTTGGATCGTCCGGGCTGTTTATCCTGATCTACCAGATCATCATCAAGGGGCTTCCGGTTCTT CTCCAGTGGAGTTCATGGTCAGGTTTTTTCGTTCTTGCCATGTTGCTGGTATCTGGTATATGGTACACACACAGTAAAAG ACTTGTACTCCTCAACACGCTTGTGGTCTCCCTGCTTCTTATTGTGATAGGTTACACCTCATACGGCATGATCTTTATCC GCGCACAGGCCGGACCGCCGATCAACGAGAATAATCCATCAACTCCCGAAGCATTTTATTCCTATCTCAACCGGGACCAG TACGGAGAGATGCCTCTTTGGCCGCGTCGATGGTCTCCTGAACCCGTACATCAGTATTTTTATCAGCAGTACTCAAGCGA TCTTGACTATTTTCTGTCCTACCAGCTCAACCATATGTATCTGCGTTATCTTGGCTGGCAGTTTATAGGGCGTGAACACG ACATGGAAGGTGCCGGGGTTGACTGGTCGGTGCTGTGGGGGCTTCCGTTTCTTTTCGGTTTTGCCGGAGCTGTTGCCCAT TTCAGGAGGCAGTGGAAAATGGGTCTTGTGGTGACTGCGCTTTTTATTCTGACAGGAGCCGCTCTGGTGATCTATCTGAA CCAGACTGAACCGCAGCCGAGAGAACGCGATTACAGTTACGTTGGAAGTTTTTTTGCTTTTGCGATCTGGATCGGTATCG GGGTCGAAACACTCCTGCATGTAATGGCGGAAAGGTTGAAGCTGCAAGCTGAACGTCATCGCCTCGCGCTTGCCCTTTTG ACGGTGACCGCAGCTCTTCTTTTAATCAACGGCAAAATGCTGCAGGCAAACTACCGGATGCATGACCGGTCGGGCAACTA TGTCCCGTGGGATTGGGCATGGAACATGCTGCAAAGCTGTGACAAGGACGCTATTCTTTTCACCAATGGCGATAATGATA CCTTTCCGCTCTGGTATCTTCAGGAAGTCGAACGCATCAGAACAGATGTTCGGGTGGTGAACCTGAGTCTTGCCAATACG GGATGGTATTTGCAGCAGCTTAAAAACACCTCTCCGAGGGGAGCCAAAACGGTTGCATTCGGTATGGGTGACGGTGAGCT TGCCTCGATTACCTACGAGCCGCTTGACTCCGTGGAGGTGTCCGTTCCAGCCGCCAAAGCTTCGCGTGAGCTTCTGCAGG AGTCGCGCCTTCAGGGCATTACACTTGCTTCTGTACCTCCGGAGACGATGCAGTGGGTTATGAAGCCAACAGTAATGTTT GAAGGTCTGGGTTACCTGCGCCCCCAGGATCGAGCCGTCTACGAAATCGTGACCAGTAATTTTCCGCAGCGTTCGATTTA CTTTGCGCTCACCGTTGATACCGAAAGCATGATTGGTCTTGAAAAAAACCTGCGGCTTGACGGTCTTGCCTACAAGGTGG TGCCGAATAAAAGCAGTGACCCGATGAGTAATGTCAATCCTGCGCTGCTCTATCATAAGCTTCTCGGAGTGTATCGCTAC CACAATCTCGACAATCCGGAGATTTCACTCGAAGAGACTTCCCGCAGGTTGTGCGCAAACTATTCGCCGCTTTTCATCAG ACTTGCTCTTGCGCTTGCCGACGACCCCGAGGCCTCTTTGCGGGTAGAGGGCAAGTCCGGTTTGGCAGTCTTGAAGAAAC GGAGCGCCATGGCGCTTGAAGTTCTCAATACGGCCTCGGTTCTTCTTCCGCCGGATCGCTATCCCCTCAATCCCGAACTT GCCGGAACAGTCACAGCGCTCTACGCAAGGCTTGGAGAAAAGAAGAAAGCATATCCGTATATTGCATATCTTGAAAAGCT TGTAAAAACAACCGATCTTCATACGGATCCCCGTTTGTTTTATATGCTTGCAGGAGCGTATCGCGCTATTGGAAGAGAGC AGGACGCATTGCGGGTCATTACATTGCTTTCCCGTGAATTACAGGAGCCTCGCCTGCTGGAGGAATTTGAAAAAATGAAA GAATAA
Upstream 100 bases:
>100_bases TCAGCTTTTTCTCACCTCGAAAGGGTTTCTGTTTGCCGATCATATCGCAGGAGAGCTTGTTTCCGATTAACCGTAACTAT ATATACAGCAGACTTTACGT
Downstream 100 bases:
>100_bases CAACGTATGAACACCATACATGCAACAGCAATAATTGATCCCGGAGTAACGCTTGGCGACAAGGTTACCATTGGACCTTA TACCGTTATTGAGGATGATG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 881; Mature: 880
Protein sequence:
>881_residues MTHRVINRIIAVILFLVAELLYLRTMAPTLSFWDCGEFIATAYTLGIPHPPGAPLFLLLGRLFSMIPFFSDIGARVNLIS TLASSATVMLTYLITLRFIILYRKSDPDGWSSSEKVSAYGSSVIAALALAFSDSFWFNAVEAEVYALSSLFTALVTWLML RWYDDDPLPGNERWLMAVMYIIGLSIGVHLLSLLALFAVAMVYCFKKYEVTPRSVALFVVGSSGLFILIYQIIIKGLPVL LQWSSWSGFFVLAMLLVSGIWYTHSKRLVLLNTLVVSLLLIVIGYTSYGMIFIRAQAGPPINENNPSTPEAFYSYLNRDQ YGEMPLWPRRWSPEPVHQYFYQQYSSDLDYFLSYQLNHMYLRYLGWQFIGREHDMEGAGVDWSVLWGLPFLFGFAGAVAH FRRQWKMGLVVTALFILTGAALVIYLNQTEPQPRERDYSYVGSFFAFAIWIGIGVETLLHVMAERLKLQAERHRLALALL TVTAALLLINGKMLQANYRMHDRSGNYVPWDWAWNMLQSCDKDAILFTNGDNDTFPLWYLQEVERIRTDVRVVNLSLANT GWYLQQLKNTSPRGAKTVAFGMGDGELASITYEPLDSVEVSVPAAKASRELLQESRLQGITLASVPPETMQWVMKPTVMF EGLGYLRPQDRAVYEIVTSNFPQRSIYFALTVDTESMIGLEKNLRLDGLAYKVVPNKSSDPMSNVNPALLYHKLLGVYRY HNLDNPEISLEETSRRLCANYSPLFIRLALALADDPEASLRVEGKSGLAVLKKRSAMALEVLNTASVLLPPDRYPLNPEL AGTVTALYARLGEKKKAYPYIAYLEKLVKTTDLHTDPRLFYMLAGAYRAIGREQDALRVITLLSRELQEPRLLEEFEKMK E
Sequences:
>Translated_881_residues MTHRVINRIIAVILFLVAELLYLRTMAPTLSFWDCGEFIATAYTLGIPHPPGAPLFLLLGRLFSMIPFFSDIGARVNLIS TLASSATVMLTYLITLRFIILYRKSDPDGWSSSEKVSAYGSSVIAALALAFSDSFWFNAVEAEVYALSSLFTALVTWLML RWYDDDPLPGNERWLMAVMYIIGLSIGVHLLSLLALFAVAMVYCFKKYEVTPRSVALFVVGSSGLFILIYQIIIKGLPVL LQWSSWSGFFVLAMLLVSGIWYTHSKRLVLLNTLVVSLLLIVIGYTSYGMIFIRAQAGPPINENNPSTPEAFYSYLNRDQ YGEMPLWPRRWSPEPVHQYFYQQYSSDLDYFLSYQLNHMYLRYLGWQFIGREHDMEGAGVDWSVLWGLPFLFGFAGAVAH FRRQWKMGLVVTALFILTGAALVIYLNQTEPQPRERDYSYVGSFFAFAIWIGIGVETLLHVMAERLKLQAERHRLALALL TVTAALLLINGKMLQANYRMHDRSGNYVPWDWAWNMLQSCDKDAILFTNGDNDTFPLWYLQEVERIRTDVRVVNLSLANT GWYLQQLKNTSPRGAKTVAFGMGDGELASITYEPLDSVEVSVPAAKASRELLQESRLQGITLASVPPETMQWVMKPTVMF EGLGYLRPQDRAVYEIVTSNFPQRSIYFALTVDTESMIGLEKNLRLDGLAYKVVPNKSSDPMSNVNPALLYHKLLGVYRY HNLDNPEISLEETSRRLCANYSPLFIRLALALADDPEASLRVEGKSGLAVLKKRSAMALEVLNTASVLLPPDRYPLNPEL AGTVTALYARLGEKKKAYPYIAYLEKLVKTTDLHTDPRLFYMLAGAYRAIGREQDALRVITLLSRELQEPRLLEEFEKMK E >Mature_880_residues THRVINRIIAVILFLVAELLYLRTMAPTLSFWDCGEFIATAYTLGIPHPPGAPLFLLLGRLFSMIPFFSDIGARVNLIST LASSATVMLTYLITLRFIILYRKSDPDGWSSSEKVSAYGSSVIAALALAFSDSFWFNAVEAEVYALSSLFTALVTWLMLR WYDDDPLPGNERWLMAVMYIIGLSIGVHLLSLLALFAVAMVYCFKKYEVTPRSVALFVVGSSGLFILIYQIIIKGLPVLL QWSSWSGFFVLAMLLVSGIWYTHSKRLVLLNTLVVSLLLIVIGYTSYGMIFIRAQAGPPINENNPSTPEAFYSYLNRDQY GEMPLWPRRWSPEPVHQYFYQQYSSDLDYFLSYQLNHMYLRYLGWQFIGREHDMEGAGVDWSVLWGLPFLFGFAGAVAHF RRQWKMGLVVTALFILTGAALVIYLNQTEPQPRERDYSYVGSFFAFAIWIGIGVETLLHVMAERLKLQAERHRLALALLT VTAALLLINGKMLQANYRMHDRSGNYVPWDWAWNMLQSCDKDAILFTNGDNDTFPLWYLQEVERIRTDVRVVNLSLANTG WYLQQLKNTSPRGAKTVAFGMGDGELASITYEPLDSVEVSVPAAKASRELLQESRLQGITLASVPPETMQWVMKPTVMFE GLGYLRPQDRAVYEIVTSNFPQRSIYFALTVDTESMIGLEKNLRLDGLAYKVVPNKSSDPMSNVNPALLYHKLLGVYRYH NLDNPEISLEETSRRLCANYSPLFIRLALALADDPEASLRVEGKSGLAVLKKRSAMALEVLNTASVLLPPDRYPLNPELA GTVTALYARLGEKKKAYPYIAYLEKLVKTTDLHTDPRLFYMLAGAYRAIGREQDALRVITLLSRELQEPRLLEEFEKMKE
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 99843; Mature: 99712
Theoretical pI: Translated: 7.22; Mature: 7.22
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 3.1 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 3.0 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTHRVINRIIAVILFLVAELLYLRTMAPTLSFWDCGEFIATAYTLGIPHPPGAPLFLLLG CCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCCCCCCHHHHHHH RLFSMIPFFSDIGARVNLISTLASSATVMLTYLITLRFIILYRKSDPDGWSSSEKVSAYG HHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCCCCCCCCHHHHHH SSVIAALALAFSDSFWFNAVEAEVYALSSLFTALVTWLMLRWYDDDPLPGNERWLMAVMY HHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHH IIGLSIGVHLLSLLALFAVAMVYCFKKYEVTPRSVALFVVGSSGLFILIYQIIIKGLPVL HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEECCCCHHHHHHHHHHCCCCEE LQWSSWSGFFVLAMLLVSGIWYTHSKRLVLLNTLVVSLLLIVIGYTSYGMIFIRAQAGPP EEECCCCHHHHHHHHHHHCHHHCCCCCHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCC INENNPSTPEAFYSYLNRDQYGEMPLWPRRWSPEPVHQYFYQQYSSDLDYFLSYQLNHMY CCCCCCCCHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCHHHHHHHHHHHHH LRYLGWQFIGREHDMEGAGVDWSVLWGLPFLFGFAGAVAHFRRQWKMGLVVTALFILTGA HHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC ALVIYLNQTEPQPRERDYSYVGSFFAFAIWIGIGVETLLHVMAERLKLQAERHRLALALL EEEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH TVTAALLLINGKMLQANYRMHDRSGNYVPWDWAWNMLQSCDKDAILFTNGDNDTFPLWYL HHHHHHHHHCCEEEEECCEEECCCCCCCCHHHHHHHHHHCCCCEEEEECCCCCCCHHHHH QEVERIRTDVRVVNLSLANTGWYLQQLKNTSPRGAKTVAFGMGDGELASITYEPLDSVEV HHHHHHHHHHEEEEEEECCCCHHHHHHHCCCCCCCEEEEEECCCCCEEEEEECCCCCCEE SVPAAKASRELLQESRLQGITLASVPPETMQWVMKPTVMFEGLGYLRPQDRAVYEIVTSN ECCHHHHHHHHHHHHHCCCEEEECCCHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHCC FPQRSIYFALTVDTESMIGLEKNLRLDGLAYKVVPNKSSDPMSNVNPALLYHKLLGVYRY CCCCEEEEEEEECCHHHHCHHCCCCCCCEEEEEECCCCCCCCCCCCHHHHHHHHHHHHHH HNLDNPEISLEETSRRLCANYSPLFIRLALALADDPEASLRVEGKSGLAVLKKRSAMALE CCCCCCCEEHHHHHHHHHCCCCHHHHHHHHHHCCCCCCCEEEECCCCHHHHHHHHHHHHH VLNTASVLLPPDRYPLNPELAGTVTALYARLGEKKKAYPYIAYLEKLVKTTDLHTDPRLF HHCCCCEEECCCCCCCCCCHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHCCCCCCHHH YMLAGAYRAIGREQDALRVITLLSRELQEPRLLEEFEKMKE HHHHHHHHHHCCCHHHHHHHHHHHHHCCCCHHHHHHHHHCC >Mature Secondary Structure THRVINRIIAVILFLVAELLYLRTMAPTLSFWDCGEFIATAYTLGIPHPPGAPLFLLLG CHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCCCCCCHHHHHHH RLFSMIPFFSDIGARVNLISTLASSATVMLTYLITLRFIILYRKSDPDGWSSSEKVSAYG HHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCCCCCCCCHHHHHH SSVIAALALAFSDSFWFNAVEAEVYALSSLFTALVTWLMLRWYDDDPLPGNERWLMAVMY HHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHH IIGLSIGVHLLSLLALFAVAMVYCFKKYEVTPRSVALFVVGSSGLFILIYQIIIKGLPVL HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEECCCCHHHHHHHHHHCCCCEE LQWSSWSGFFVLAMLLVSGIWYTHSKRLVLLNTLVVSLLLIVIGYTSYGMIFIRAQAGPP EEECCCCHHHHHHHHHHHCHHHCCCCCHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCC INENNPSTPEAFYSYLNRDQYGEMPLWPRRWSPEPVHQYFYQQYSSDLDYFLSYQLNHMY CCCCCCCCHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCHHHHHHHHHHHHH LRYLGWQFIGREHDMEGAGVDWSVLWGLPFLFGFAGAVAHFRRQWKMGLVVTALFILTGA HHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC ALVIYLNQTEPQPRERDYSYVGSFFAFAIWIGIGVETLLHVMAERLKLQAERHRLALALL EEEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH TVTAALLLINGKMLQANYRMHDRSGNYVPWDWAWNMLQSCDKDAILFTNGDNDTFPLWYL HHHHHHHHHCCEEEEECCEEECCCCCCCCHHHHHHHHHHCCCCEEEEECCCCCCCHHHHH QEVERIRTDVRVVNLSLANTGWYLQQLKNTSPRGAKTVAFGMGDGELASITYEPLDSVEV HHHHHHHHHHEEEEEEECCCCHHHHHHHCCCCCCCEEEEEECCCCCEEEEEECCCCCCEE SVPAAKASRELLQESRLQGITLASVPPETMQWVMKPTVMFEGLGYLRPQDRAVYEIVTSN ECCHHHHHHHHHHHHHCCCEEEECCCHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHCC FPQRSIYFALTVDTESMIGLEKNLRLDGLAYKVVPNKSSDPMSNVNPALLYHKLLGVYRY CCCCEEEEEEEECCHHHHCHHCCCCCCCEEEEEECCCCCCCCCCCCHHHHHHHHHHHHHH HNLDNPEISLEETSRRLCANYSPLFIRLALALADDPEASLRVEGKSGLAVLKKRSAMALE CCCCCCCEEHHHHHHHHHCCCCHHHHHHHHHHCCCCCCCEEEECCCCHHHHHHHHHHHHH VLNTASVLLPPDRYPLNPELAGTVTALYARLGEKKKAYPYIAYLEKLVKTTDLHTDPRLF HHCCCCEEECCCCCCCCCCHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHCCCCCCHHH YMLAGAYRAIGREQDALRVITLLSRELQEPRLLEEFEKMKE HHHHHHHHHHCCCHHHHHHHHHHHHHCCCCHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA