| Definition | Chlorobium phaeobacteroides DSM 266 chromosome, complete genome. |
|---|---|
| Accession | NC_008639 |
| Length | 3,133,902 |
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The map label for this gene is yidB [C]
Identifier: 119358121
GI number: 119358121
Start: 2738953
End: 2739390
Strand: Direct
Name: yidB [C]
Synonym: Cpha266_2353
Alternate gene names: 119358121
Gene position: 2738953-2739390 (Clockwise)
Preceding gene: 119358106
Following gene: 119358136
Centisome position: 87.4
GC content: 50.0
Gene sequence:
>438_bases ATGAACTTCAACGACCTGCTACAGCTTGGAGCATCGCTTATTCAGGGAAACAGCGATGAAAACACAACCGGTTTGGCAAC AAATAAAATCAGCAATGCTCTTGCAGATCTTCTTGGGGGAGGAGGAAAACTTGATTTCGGGACTATTGTGTCAACCATGC AGTCAAGCGGCCTCGGAGATATGGCGGCATCCTGGCTTGGGAAAGGAAATAACATGCCGATTTCAGCGGATAGCATCGCC AATGTAATCAGCCCGGATAAAATTGCCGCTTTTGCCGCACAACTCGGACTCCCCGAAAGCAGTGCAAAAACTGCCATAGC AGATGCTCTGCCCCGAATGATCGATCAAGCCAGTCCTGATGGATCGATACTCGAAAGCTTCCTCGGTAAAACTGGCGGCG TACAGGGGCTGCTGGATCTTGCAGGTAAACTGGTGTGA
Upstream 100 bases:
>100_bases ATCTATCGTGAGTAACGTTCGGGTTTGAGCCTTTGTCTTCAGGGCAGATCCATTACTCTATCAGCATTAATAGTATTTCA TTAACCACAACAAAAACGCC
Downstream 100 bases:
>100_bases TGGATTAACCGTATAACGCCAGAAAACCGTCAGGATCAGAATTTTAACGTTCTGACCCTGACGGTTAACAACACACAACA CAAAGGCCTTATGAACTCAG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 145; Mature: 145
Protein sequence:
>145_residues MNFNDLLQLGASLIQGNSDENTTGLATNKISNALADLLGGGGKLDFGTIVSTMQSSGLGDMAASWLGKGNNMPISADSIA NVISPDKIAAFAAQLGLPESSAKTAIADALPRMIDQASPDGSILESFLGKTGGVQGLLDLAGKLV
Sequences:
>Translated_145_residues MNFNDLLQLGASLIQGNSDENTTGLATNKISNALADLLGGGGKLDFGTIVSTMQSSGLGDMAASWLGKGNNMPISADSIA NVISPDKIAAFAAQLGLPESSAKTAIADALPRMIDQASPDGSILESFLGKTGGVQGLLDLAGKLV >Mature_145_residues MNFNDLLQLGASLIQGNSDENTTGLATNKISNALADLLGGGGKLDFGTIVSTMQSSGLGDMAASWLGKGNNMPISADSIA NVISPDKIAAFAAQLGLPESSAKTAIADALPRMIDQASPDGSILESFLGKTGGVQGLLDLAGKLV
Specific function: Unknown
COG id: COG3753
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 14606; Mature: 14606
Theoretical pI: Translated: 4.10; Mature: 4.10
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.4 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 3.4 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNFNDLLQLGASLIQGNSDENTTGLATNKISNALADLLGGGGKLDFGTIVSTMQSSGLGD CCHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCHH MAASWLGKGNNMPISADSIANVISPDKIAAFAAQLGLPESSAKTAIADALPRMIDQASPD HHHHHHCCCCCCCCCHHHHHHHCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCC GSILESFLGKTGGVQGLLDLAGKLV HHHHHHHHCCCCCHHHHHHHHHCCC >Mature Secondary Structure MNFNDLLQLGASLIQGNSDENTTGLATNKISNALADLLGGGGKLDFGTIVSTMQSSGLGD CCHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCHH MAASWLGKGNNMPISADSIANVISPDKIAAFAAQLGLPESSAKTAIADALPRMIDQASPD HHHHHHCCCCCCCCCHHHHHHHCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCC GSILESFLGKTGGVQGLLDLAGKLV HHHHHHHHCCCCCHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA