| Definition | Chlorobium phaeobacteroides DSM 266 chromosome, complete genome. |
|---|---|
| Accession | NC_008639 |
| Length | 3,133,902 |
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The map label for this gene is 119358089
Identifier: 119358089
GI number: 119358089
Start: 2661040
End: 2662260
Strand: Reverse
Name: 119358089
Synonym: Cpha266_2318
Alternate gene names: NA
Gene position: 2662260-2661040 (Counterclockwise)
Preceding gene: 119358090
Following gene: 119358088
Centisome position: 84.95
GC content: 50.7
Gene sequence:
>1221_bases ATGAATTTTTTATTTGTACATCAGAACTTTCCCGGACAGTTCCGACATGTTGCCAAAGCCCTGGCCGAGATGCCGGAACA CCGGGTAGTCGGTATTGGAGAGAGCGCCAATCTCAAGGGACGTCTGTCGTTGCATCCCCGGATAAACGTAATGGGGTATC AGCCGAAAAGGGGTGCGAGTCCAGAGACTCACCACTATATCCGTGACTTCGAAGGGGCTGTACGCCGGGGCCAGGAGGTT GCCCGTGTGGCGTTTGAGCTCCGAAAGAAAGGGTTTCGTCCCGATCTGGTGATCAGCCATCCAGCCTGGGGGGAGTCGTT TTTTCTTCCGGATATTTTTCCGGATGCCCGTCATATCGGTTATTTCGAGTACTTCTATCGGAGTTCCGGGGGGGATATCG GGTTTGATCCGGAGTTTCCTTCTTCTTTTGATGATCGGCTGAAGGTAAGGATTAAAAACACGACTCAGCTTCTGAGCCTT GATTCTGCCGATGCAGGAATTTCGCCTACCCTGTGGCAGCAGAGCCGCTATCCGAAAGAGTTTCATTCGAAAATCAGGGT AATTCACGAAGGGGTGGATACCAACGTTGTCGCTCCTGACGAAAATGCATCGATTGATATTGACGGAGCGCATTTCATAA GAGGCGACAGGGTTATTACCTATGTAGCCCGTAATCTGGAACCTTGTCGAGGGGTTCATGTGTTCATTCGCGCTATTCCA CTGATTCAGGAGCTGTGCCCTGATGCACGGATTGTTATTATCGGAGGCGATGATGTCAGTTACGGGAGAAGACCTACGGC AGGAACAACCTACCGGTCACTTTATTGTGACGAAGTGAAAGATGTAGCGGACTGGTCACGGGTTCATTTTACCGGCAGGC TGCCCTACAACCGCTACCTGAAAATTTTACAGCTCTCTTCAGCTCATGTTTATCTTACCTATCCTTTTGTGCTCTCCTGG TCGATGCTTGAGGCAATGGCTGCCGGTTGTGTTGTGATCGGTTCAGCGACGCCCCCTGTTCAGGAGGTCATTACTCATGC AGAGAATGGCCTGCTGGTTGACTTTTTCGACAGGGAAGAACTTGCTCGTACGGTTGCCGGAGTAGTCAATAACCAGTCAC AGCATGAACAGATAAGGCAATCTGCCCGACAGACCATACTTGATCGCTATGATCTGCATACAAAATGCCTGCCCGAACTG CTGCGGTATCTGATCGGGTAG
Upstream 100 bases:
>100_bases TTACCGATAATACGCCGCCATCGGGTTTGACCTGATCGTTATTGTGCGAAGAAGGCCGTTTCGGTTTGTTCCAGAACGGC CTGAACAAGATTTGTTATCC
Downstream 100 bases:
>100_bases TGGGATTTGGGTAGATATGGGTTCTGAGTGCTGAGCAATGAGTGCTGAGTTGGGGGAAAGAAGGGAAGAGAGATCTCTCC CGAACCACCCCCCTTCTGTC
Product: glycosyl transferase, group 1
Products: NA
Alternate protein names: Group 1 Glycosyl Transferase; Glycosyl Transferase Group 1 Family Protein; Glycosyl Transferase Family Protein; Glycosyl Transferase
Number of amino acids: Translated: 406; Mature: 406
Protein sequence:
>406_residues MNFLFVHQNFPGQFRHVAKALAEMPEHRVVGIGESANLKGRLSLHPRINVMGYQPKRGASPETHHYIRDFEGAVRRGQEV ARVAFELRKKGFRPDLVISHPAWGESFFLPDIFPDARHIGYFEYFYRSSGGDIGFDPEFPSSFDDRLKVRIKNTTQLLSL DSADAGISPTLWQQSRYPKEFHSKIRVIHEGVDTNVVAPDENASIDIDGAHFIRGDRVITYVARNLEPCRGVHVFIRAIP LIQELCPDARIVIIGGDDVSYGRRPTAGTTYRSLYCDEVKDVADWSRVHFTGRLPYNRYLKILQLSSAHVYLTYPFVLSW SMLEAMAAGCVVIGSATPPVQEVITHAENGLLVDFFDREELARTVAGVVNNQSQHEQIRQSARQTILDRYDLHTKCLPEL LRYLIG
Sequences:
>Translated_406_residues MNFLFVHQNFPGQFRHVAKALAEMPEHRVVGIGESANLKGRLSLHPRINVMGYQPKRGASPETHHYIRDFEGAVRRGQEV ARVAFELRKKGFRPDLVISHPAWGESFFLPDIFPDARHIGYFEYFYRSSGGDIGFDPEFPSSFDDRLKVRIKNTTQLLSL DSADAGISPTLWQQSRYPKEFHSKIRVIHEGVDTNVVAPDENASIDIDGAHFIRGDRVITYVARNLEPCRGVHVFIRAIP LIQELCPDARIVIIGGDDVSYGRRPTAGTTYRSLYCDEVKDVADWSRVHFTGRLPYNRYLKILQLSSAHVYLTYPFVLSW SMLEAMAAGCVVIGSATPPVQEVITHAENGLLVDFFDREELARTVAGVVNNQSQHEQIRQSARQTILDRYDLHTKCLPEL LRYLIG >Mature_406_residues MNFLFVHQNFPGQFRHVAKALAEMPEHRVVGIGESANLKGRLSLHPRINVMGYQPKRGASPETHHYIRDFEGAVRRGQEV ARVAFELRKKGFRPDLVISHPAWGESFFLPDIFPDARHIGYFEYFYRSSGGDIGFDPEFPSSFDDRLKVRIKNTTQLLSL DSADAGISPTLWQQSRYPKEFHSKIRVIHEGVDTNVVAPDENASIDIDGAHFIRGDRVITYVARNLEPCRGVHVFIRAIP LIQELCPDARIVIIGGDDVSYGRRPTAGTTYRSLYCDEVKDVADWSRVHFTGRLPYNRYLKILQLSSAHVYLTYPFVLSW SMLEAMAAGCVVIGSATPPVQEVITHAENGLLVDFFDREELARTVAGVVNNQSQHEQIRQSARQTILDRYDLHTKCLPEL LRYLIG
Specific function: Unknown
COG id: COG0438
COG function: function code M; Glycosyltransferase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 46063; Mature: 46063
Theoretical pI: Translated: 7.50; Mature: 7.50
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNFLFVHQNFPGQFRHVAKALAEMPEHRVVGIGESANLKGRLSLHPRINVMGYQPKRGAS CCEEEEECCCCHHHHHHHHHHHHCCCCEEEEECCCCCCCEEEEECCEEEEEECCCCCCCC PETHHYIRDFEGAVRRGQEVARVAFELRKKGFRPDLVISHPAWGESFFLPDIFPDARHIG CCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEECCCCCCCCCCCCCCCCCHHCC YFEYFYRSSGGDIGFDPEFPSSFDDRLKVRIKNTTQLLSLDSADAGISPTLWQQSRYPKE HHHHHEECCCCCCCCCCCCCCCCCCEEEEEECCCEEEEEECCCCCCCCCHHHHCCCCCHH FHSKIRVIHEGVDTNVVAPDENASIDIDGAHFIRGDRVITYVARNLEPCRGVHVFIRAIP HHHHHHHHHCCCCCCEECCCCCCEEEECCCEEEECCCEEEHHHHCCCCHHHHHHHHHHHH LIQELCPDARIVIIGGDDVSYGRRPTAGTTYRSLYCDEVKDVADWSRVHFTGRLPYNRYL HHHHHCCCCEEEEECCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHEEEEECCCHHHHH KILQLSSAHVYLTYPFVLSWSMLEAMAAGCVVIGSATPPVQEVITHAENGLLVDFFDREE HHEEECCCEEEEEEHHHHHHHHHHHHHCCEEEECCCCCCHHHHHHHCCCCEEEEECCHHH LARTVAGVVNNQSQHEQIRQSARQTILDRYDLHTKCLPELLRYLIG HHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCC >Mature Secondary Structure MNFLFVHQNFPGQFRHVAKALAEMPEHRVVGIGESANLKGRLSLHPRINVMGYQPKRGAS CCEEEEECCCCHHHHHHHHHHHHCCCCEEEEECCCCCCCEEEEECCEEEEEECCCCCCCC PETHHYIRDFEGAVRRGQEVARVAFELRKKGFRPDLVISHPAWGESFFLPDIFPDARHIG CCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEECCCCCCCCCCCCCCCCCHHCC YFEYFYRSSGGDIGFDPEFPSSFDDRLKVRIKNTTQLLSLDSADAGISPTLWQQSRYPKE HHHHHEECCCCCCCCCCCCCCCCCCEEEEEECCCEEEEEECCCCCCCCCHHHHCCCCCHH FHSKIRVIHEGVDTNVVAPDENASIDIDGAHFIRGDRVITYVARNLEPCRGVHVFIRAIP HHHHHHHHHCCCCCCEECCCCCCEEEECCCEEEECCCEEEHHHHCCCCHHHHHHHHHHHH LIQELCPDARIVIIGGDDVSYGRRPTAGTTYRSLYCDEVKDVADWSRVHFTGRLPYNRYL HHHHHCCCCEEEEECCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHEEEEECCCHHHHH KILQLSSAHVYLTYPFVLSWSMLEAMAAGCVVIGSATPPVQEVITHAENGLLVDFFDREE HHEEECCCEEEEEEHHHHHHHHHHHHHCCEEEECCCCCCHHHHHHHCCCCEEEEECCHHH LARTVAGVVNNQSQHEQIRQSARQTILDRYDLHTKCLPELLRYLIG HHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA