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The map label for this gene is 119358088

Identifier: 119358088

GI number: 119358088

Start: 2659860

End: 2660156

Strand: Reverse

Name: 119358088

Synonym: Cpha266_2317

Alternate gene names: NA

Gene position: 2660156-2659860 (Counterclockwise)

Preceding gene: 119358089

Following gene: 119358087

Centisome position: 84.88

GC content: 38.05

Gene sequence:

>297_bases
ATGATTCGTGATAAAGCATATTGTGTATACATTCTTGCCAACCAGGCAAACAATGTGATCTATGTGGGCATGACAAATGA
TCTGCAGCGAAGGGTTCTTGAACACAAAAGCAGGCTTGTCGATGGATTTTCAAAAAAATATAATGTAGATAAACTGGTCT
ATTTTGAAGAAACGAGCGATGTGCTGAGAGCTATAGCAAGGGAAAAAGAGATAAAAAAATGGAGACGGGAAAAGAAAAAT
TTACTGATTGCTACGATGAATCCTGAATGGAAAGATCTTGCCTGCGAATGCTCATGA

Upstream 100 bases:

>100_bases
AGAGAGGGATCTCATTGTTATGGCGTAAAACTTGTCTTGTCCGATGTAGAGGGGAGTACCCTCAAATCGTAATGCAGGAA
TTCAGGAGCTGCTGAATAGA

Downstream 100 bases:

>100_bases
CTAAGCAACTGGTATGCGAAGCAGGGGCAAAAGAAGTGAAGAGAAGAGAGATCTCTCCCGAACCACCCCCCTTTGTCATC
CCGAACGCAGAGAGGGATCT

Product: excinuclease ABC subunit C

Products: NA

Alternate protein names: Excinuclease ABC C Subunit Domain Protein; Endonuclease; Excinuclease ABC Subunit C Domain-Containing Protein; Excinuclease ABC C Subunit; Excinuclease ABC C Subunit Domain-Containing Protein; Endo/Excinuclease Amino Terminal Domain-Containing Protein; GIY-YIG Catalytic Domain-Containing Protein; Excinuclease ABC; Endo/Excinuclease; Excinuclease ABCsubunit C Domain-Containing Protein; Endo/Excinuclease Amino Terminal Domain Protein

Number of amino acids: Translated: 98; Mature: 98

Protein sequence:

>98_residues
MIRDKAYCVYILANQANNVIYVGMTNDLQRRVLEHKSRLVDGFSKKYNVDKLVYFEETSDVLRAIAREKEIKKWRREKKN
LLIATMNPEWKDLACECS

Sequences:

>Translated_98_residues
MIRDKAYCVYILANQANNVIYVGMTNDLQRRVLEHKSRLVDGFSKKYNVDKLVYFEETSDVLRAIAREKEIKKWRREKKN
LLIATMNPEWKDLACECS
>Mature_98_residues
MIRDKAYCVYILANQANNVIYVGMTNDLQRRVLEHKSRLVDGFSKKYNVDKLVYFEETSDVLRAIAREKEIKKWRREKKN
LLIATMNPEWKDLACECS

Specific function: Unknown

COG id: COG2827

COG function: function code L; Predicted endonuclease containing a URI domain

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 11630; Mature: 11630

Theoretical pI: Translated: 9.46; Mature: 9.46

Prosite motif: PS50164 UVRC_1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.1 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
6.1 %Cys+Met (Translated Protein)
3.1 %Cys     (Mature Protein)
3.1 %Met     (Mature Protein)
6.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIRDKAYCVYILANQANNVIYVGMTNDLQRRVLEHKSRLVDGFSKKYNVDKLVYFEETSD
CCCCCEEEEEEEECCCCCEEEEEECCHHHHHHHHHHHHHHHHHCCCCCCCEEEEEECHHH
VLRAIAREKEIKKWRREKKNLLIATMNPEWKDLACECS
HHHHHHHHHHHHHHHHHHCCEEEEECCCCCCCEEEECC
>Mature Secondary Structure
MIRDKAYCVYILANQANNVIYVGMTNDLQRRVLEHKSRLVDGFSKKYNVDKLVYFEETSD
CCCCCEEEEEEEECCCCCEEEEEECCHHHHHHHHHHHHHHHHHCCCCCCCEEEEEECHHH
VLRAIAREKEIKKWRREKKNLLIATMNPEWKDLACECS
HHHHHHHHHHHHHHHHHHCCEEEEECCCCCCCEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA