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The map label for this gene is yqeN [H]

Identifier: 119358076

GI number: 119358076

Start: 2636831

End: 2637904

Strand: Direct

Name: yqeN [H]

Synonym: Cpha266_2304

Alternate gene names: 119358076

Gene position: 2636831-2637904 (Clockwise)

Preceding gene: 119358075

Following gene: 119358078

Centisome position: 84.14

GC content: 48.51

Gene sequence:

>1074_bases
ATGACCTCCCGTTCTGAAAAAAAAAACCGGGATGACGGAGAAATCGCTCCCGTATATTTCCTTACAGGCACTGAAGAGTA
CCTTAAGGAAGAACTCACCGGACGGATCAGGAACACCCTGTTTCCGTCCAGGGAAGATGCGGCCTGCAACACCATCATCC
TCTACGGGCCGGAACTGACGCTCGGGGATCTTGTCTCGAGAGCATCTGAGTACCCGATGTTTACCGAAAAAAAACTCATC
ATTGTCCGTCAGTTCGAAAAAATCAAAAAAACAGCATCCAAAGAGCAGCAAAAACTTCATGAAGAGAAGTACAACAGCTA
TCTCCTTAATCCGGCTGACTTTACAGTACTGGTTCTCGATGCGGGACAGATCGATAAAAAAGACCTCGACAAATCACCCT
TTCTGCAACTGAAAAAGTACCGCAAGGACTTTCCTGCCATCAAAACCCCCGACCTCTTCGCATCCGACAGGGCAAAAGCC
TCTGGATGGGAGTTCGAACCGGATGCACTGAAAGCCTTTACCGCCTATATCCAGCCATCCGCCAGAGAGATTTGCCACGA
AATCCAGAAAATGATCCTTTACGCTTCCGACCAGCGACAAGGCAACAAAATCACAGCGCTCGACGTCTATGAGTGTGTCG
GCATATCGCGAACCTACAACATCTTCGAGCTTGAAAAAGCACTCGCGACGAAAAACATGAGAATGTGCAGCGGCATATCG
CTGATGATCATGGATCAAGAGGGCCAAAAAGAGGGACTCGGCAGCATCGTTCGTTACCTGACAACCTTTTATATCAGGCT
CTGGAAACTCTCCGTACCCGAAGTCCGTCGGCTCCCCGCATCCGATATAGCCAAAATACTCGGCATGTACGGAAAACAGG
AGTATTTCGTAAAAAGTTACCTCGACTACACAAAAGCATTTTCCATGCAGGACGCTGAAAAGGCACTGATAGCACTCCGT
GCCACCGACGCGGCACTGAAAGGCATCTTACCTTACACCGACGAAAAATTCCTGCTCCTTCAACTCATGCAGAAATTGCT
CGGAGGAAATAGCGGAGAAAGTGTTAAGGGTTAA

Upstream 100 bases:

>100_bases
GATCGCTCACCCCGGTACACCACAGCTCCAAAAGGAACTTCCACAGGATCAGGCGACTACCCGCAGCAATCCTCAGGCCC
AATGATTGAAAGCGAAAAAG

Downstream 100 bases:

>100_bases
CTCCCCTCCAGTCATCCCGAATTTCCTCTTTGTCATCCCGAACCACCCCCTTGTCATCCCGAACGCAGAGAGGGATCTCA
TCGTTGTAGCGATTGACCCT

Product: DNA polymerase III, delta subunit

Products: diphosphate; DNAn+1

Alternate protein names: NA

Number of amino acids: Translated: 357; Mature: 356

Protein sequence:

>357_residues
MTSRSEKKNRDDGEIAPVYFLTGTEEYLKEELTGRIRNTLFPSREDAACNTIILYGPELTLGDLVSRASEYPMFTEKKLI
IVRQFEKIKKTASKEQQKLHEEKYNSYLLNPADFTVLVLDAGQIDKKDLDKSPFLQLKKYRKDFPAIKTPDLFASDRAKA
SGWEFEPDALKAFTAYIQPSAREICHEIQKMILYASDQRQGNKITALDVYECVGISRTYNIFELEKALATKNMRMCSGIS
LMIMDQEGQKEGLGSIVRYLTTFYIRLWKLSVPEVRRLPASDIAKILGMYGKQEYFVKSYLDYTKAFSMQDAEKALIALR
ATDAALKGILPYTDEKFLLLQLMQKLLGGNSGESVKG

Sequences:

>Translated_357_residues
MTSRSEKKNRDDGEIAPVYFLTGTEEYLKEELTGRIRNTLFPSREDAACNTIILYGPELTLGDLVSRASEYPMFTEKKLI
IVRQFEKIKKTASKEQQKLHEEKYNSYLLNPADFTVLVLDAGQIDKKDLDKSPFLQLKKYRKDFPAIKTPDLFASDRAKA
SGWEFEPDALKAFTAYIQPSAREICHEIQKMILYASDQRQGNKITALDVYECVGISRTYNIFELEKALATKNMRMCSGIS
LMIMDQEGQKEGLGSIVRYLTTFYIRLWKLSVPEVRRLPASDIAKILGMYGKQEYFVKSYLDYTKAFSMQDAEKALIALR
ATDAALKGILPYTDEKFLLLQLMQKLLGGNSGESVKG
>Mature_356_residues
TSRSEKKNRDDGEIAPVYFLTGTEEYLKEELTGRIRNTLFPSREDAACNTIILYGPELTLGDLVSRASEYPMFTEKKLII
VRQFEKIKKTASKEQQKLHEEKYNSYLLNPADFTVLVLDAGQIDKKDLDKSPFLQLKKYRKDFPAIKTPDLFASDRAKAS
GWEFEPDALKAFTAYIQPSAREICHEIQKMILYASDQRQGNKITALDVYECVGISRTYNIFELEKALATKNMRMCSGISL
MIMDQEGQKEGLGSIVRYLTTFYIRLWKLSVPEVRRLPASDIAKILGMYGKQEYFVKSYLDYTKAFSMQDAEKALIALRA
TDAALKGILPYTDEKFLLLQLMQKLLGGNSGESVKG

Specific function: Unknown

COG id: COG1466

COG function: function code L; DNA polymerase III, delta subunit

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR008921
- InterPro:   IPR010372
- InterPro:   IPR005790 [H]

Pfam domain/function: PF06144 DNA_pol3_delta [H]

EC number: 2.7.7.7

Molecular weight: Translated: 40689; Mature: 40558

Theoretical pI: Translated: 8.71; Mature: 8.71

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTSRSEKKNRDDGEIAPVYFLTGTEEYLKEELTGRIRNTLFPSREDAACNTIILYGPELT
CCCCCCCCCCCCCCEEEEEEECCCHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEECCCCC
LGDLVSRASEYPMFTEKKLIIVRQFEKIKKTASKEQQKLHEEKYNSYLLNPADFTVLVLD
HHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCEECCCCCEEEEEEE
AGQIDKKDLDKSPFLQLKKYRKDFPAIKTPDLFASDRAKASGWEFEPDALKAFTAYIQPS
CCCCCHHHCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCH
AREICHEIQKMILYASDQRQGNKITALDVYECVGISRTYNIFELEKALATKNMRMCSGIS
HHHHHHHHHHHHHHHCCCCCCCEEEEEHHHHHHCCCCCCHHHHHHHHHHHCCHHHHCCCE
LMIMDQEGQKEGLGSIVRYLTTFYIRLWKLSVPEVRRLPASDIAKILGMYGKQEYFVKSY
EEEECCCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHCCCHHHHHHHHHHHCCHHHHHHHH
LDYTKAFSMQDAEKALIALRATDAALKGILPYTDEKFLLLQLMQKLLGGNSGESVKG
HHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHCCCCCCCCCC
>Mature Secondary Structure 
TSRSEKKNRDDGEIAPVYFLTGTEEYLKEELTGRIRNTLFPSREDAACNTIILYGPELT
CCCCCCCCCCCCCEEEEEEECCCHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEECCCCC
LGDLVSRASEYPMFTEKKLIIVRQFEKIKKTASKEQQKLHEEKYNSYLLNPADFTVLVLD
HHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCEECCCCCEEEEEEE
AGQIDKKDLDKSPFLQLKKYRKDFPAIKTPDLFASDRAKASGWEFEPDALKAFTAYIQPS
CCCCCHHHCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCH
AREICHEIQKMILYASDQRQGNKITALDVYECVGISRTYNIFELEKALATKNMRMCSGIS
HHHHHHHHHHHHHHHCCCCCCCEEEEEHHHHHHCCCCCCHHHHHHHHHHHCCHHHHCCCE
LMIMDQEGQKEGLGSIVRYLTTFYIRLWKLSVPEVRRLPASDIAKILGMYGKQEYFVKSY
EEEECCCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHCCCHHHHHHHHHHHCCHHHHHHHH
LDYTKAFSMQDAEKALIALRATDAALKGILPYTDEKFLLLQLMQKLLGGNSGESVKG
HHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: deoxynucleoside triphosphate; DNAn

Specific reaction: deoxynucleoside triphosphate + DNA(n) = diphosphate + DNA(n+1)

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8969508; 9384377 [H]