Click here to switch to the map view.

The map label for this gene is pyrK [H]

Identifier: 119358074

GI number: 119358074

Start: 2635369

End: 2636238

Strand: Direct

Name: pyrK [H]

Synonym: Cpha266_2302

Alternate gene names: 119358074

Gene position: 2635369-2636238 (Clockwise)

Preceding gene: 119358068

Following gene: 119358075

Centisome position: 84.09

GC content: 51.84

Gene sequence:

>870_bases
ATGCTTTATTACCTTACAGCAAAAGAGAACTGCTCAACCACGGACAAACCGTTTCTATTAACAACTGCAGCCAACATGCA
AAAAAAATCATCTATCGTTGATATCACGGCAACCGTTACGGCAACAAATCCGATAAGCAGTGACGTTACCGTCATTACTC
TTCACTGCCCTGAAATCGCCGAACGAGCAATACCGGGAAACTTTGTCAATATTAAAGTTAACGATTCAACTCAGCCGCTG
CTCCGACGTCCGTTTTCCATACACCGGGTTCAAGGCGAAACAATCGCGATCATGGCAAAATCCATAGGCCGGGGCACAGC
TATCCTCTGCAACTCCCTTCCCGGCTCAACCATGCAAGTGCTTGGCCCGCTCGGCAACGGATTTACGCCTCCCGACTCTT
CCTTTGCCACCGCACTGCTCGTATCCGGAGGCATAGGCACAGCTCCCATGTTTTTTCTTGAAAAAACACTTGCAGCCAGC
GGTAAAAATGTCATCCATATCATCGGCGGACGATCATCCGGCGACCTCCTTCTCCATAACCTCTCGAACTGCCGCACCGC
AACCGACGACGGCTCGACTGGATTCCTGGGAACGGCCGTGGATCTTCTTCGGCACGACCTGCCTGAACTGCGTCAAAATG
GCCCGCTCAAAGTTTTCTCATGCGGACCGAACGCAATGCTCAGGGCCCTTGCGAAGTTCTGCCGTGAACAGAATATTCCC
TGCGAAGTATCGCTTGAATCTGTTATGGGATGCGGGATCGGCATCTGTTATGGCTGCAGCATTGAGGTCAATGCGCCCGA
CGGCGGCACCGAAACCATTCTGCTCTGCCGTGAAGGAGCGGTCATCAATGCAGAGCGGCTTGTTTTATAA

Upstream 100 bases:

>100_bases
GAGACGGTCAAAAAACGTCAGCCTGTTCTTTTCGTCAAGAGCTCCATTGAGCATAAGCGAATCAACGAAAACCCTCTCTT
GTTTGCATAAGAAGTTCCTC

Downstream 100 bases:

>100_bases
CTCTACTTTTATTCTTATCATCGAAAAAAGAACAGCTCTCAGTATCCAATATTTTTACTTTTCTATACTAACGCTAATCC
GGGAACAGATACTATGGCAA

Product: dihydroorotate oxidase B, electron transfer subunit

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 289; Mature: 289

Protein sequence:

>289_residues
MLYYLTAKENCSTTDKPFLLTTAANMQKKSSIVDITATVTATNPISSDVTVITLHCPEIAERAIPGNFVNIKVNDSTQPL
LRRPFSIHRVQGETIAIMAKSIGRGTAILCNSLPGSTMQVLGPLGNGFTPPDSSFATALLVSGGIGTAPMFFLEKTLAAS
GKNVIHIIGGRSSGDLLLHNLSNCRTATDDGSTGFLGTAVDLLRHDLPELRQNGPLKVFSCGPNAMLRALAKFCREQNIP
CEVSLESVMGCGIGICYGCSIEVNAPDGGTETILLCREGAVINAERLVL

Sequences:

>Translated_289_residues
MLYYLTAKENCSTTDKPFLLTTAANMQKKSSIVDITATVTATNPISSDVTVITLHCPEIAERAIPGNFVNIKVNDSTQPL
LRRPFSIHRVQGETIAIMAKSIGRGTAILCNSLPGSTMQVLGPLGNGFTPPDSSFATALLVSGGIGTAPMFFLEKTLAAS
GKNVIHIIGGRSSGDLLLHNLSNCRTATDDGSTGFLGTAVDLLRHDLPELRQNGPLKVFSCGPNAMLRALAKFCREQNIP
CEVSLESVMGCGIGICYGCSIEVNAPDGGTETILLCREGAVINAERLVL
>Mature_289_residues
MLYYLTAKENCSTTDKPFLLTTAANMQKKSSIVDITATVTATNPISSDVTVITLHCPEIAERAIPGNFVNIKVNDSTQPL
LRRPFSIHRVQGETIAIMAKSIGRGTAILCNSLPGSTMQVLGPLGNGFTPPDSSFATALLVSGGIGTAPMFFLEKTLAAS
GKNVIHIIGGRSSGDLLLHNLSNCRTATDDGSTGFLGTAVDLLRHDLPELRQNGPLKVFSCGPNAMLRALAKFCREQNIP
CEVSLESVMGCGIGICYGCSIEVNAPDGGTETILLCREGAVINAERLVL

Specific function: Is responsible for channeling the electrons from the oxidation of dihydroorotate from the FMN redox center in the pyrD subunit to the ultimate electron acceptor NAD(+) [H]

COG id: COG0543

COG function: function code HC; 2-polyprenylphenol hydroxylase and related flavodoxin oxidoreductases

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 FAD-binding FR-type domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR012165
- InterPro:   IPR019480
- InterPro:   IPR017927
- InterPro:   IPR008333
- InterPro:   IPR001433
- InterPro:   IPR017938 [H]

Pfam domain/function: PF10418 DHODB_Fe-S_bind; PF00970 FAD_binding_6; PF00175 NAD_binding_1 [H]

EC number: NA

Molecular weight: Translated: 30538; Mature: 30538

Theoretical pI: Translated: 6.95; Mature: 6.95

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.8 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
6.2 %Cys+Met (Translated Protein)
3.8 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
6.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLYYLTAKENCSTTDKPFLLTTAANMQKKSSIVDITATVTATNPISSDVTVITLHCPEIA
CEEEEEECCCCCCCCCCEEEEECCCCHHCCCEEEEEEEEEECCCCCCCEEEEEEECHHHH
ERAIPGNFVNIKVNDSTQPLLRRPFSIHRVQGETIAIMAKSIGRGTAILCNSLPGSTMQV
HHCCCCCEEEEEECCCCCHHHHCCCEEEEECCCEEEEEEHHCCCCEEEEEECCCCCHHHH
LGPLGNGFTPPDSSFATALLVSGGIGTAPMFFLEKTLAASGKNVIHIIGGRSSGDLLLHN
HCCCCCCCCCCCCCHHEEEEEECCCCCHHHHHHHHHHHCCCCCEEEEEECCCCCCEEEEE
LSNCRTATDDGSTGFLGTAVDLLRHDLPELRQNGPLKVFSCGPNAMLRALAKFCREQNIP
CCCCCCCCCCCCCCHHHHHHHHHHHCHHHHHCCCCEEEEECCHHHHHHHHHHHHHHCCCC
CEVSLESVMGCGIGICYGCSIEVNAPDGGTETILLCREGAVINAERLVL
EEEEHHHHHCCCCEEEEECEEEEECCCCCCEEEEEEECCCEECHHEECC
>Mature Secondary Structure
MLYYLTAKENCSTTDKPFLLTTAANMQKKSSIVDITATVTATNPISSDVTVITLHCPEIA
CEEEEEECCCCCCCCCCEEEEECCCCHHCCCEEEEEEEEEECCCCCCCEEEEEEECHHHH
ERAIPGNFVNIKVNDSTQPLLRRPFSIHRVQGETIAIMAKSIGRGTAILCNSLPGSTMQV
HHCCCCCEEEEEECCCCCHHHHCCCEEEEECCCEEEEEEHHCCCCEEEEEECCCCCHHHH
LGPLGNGFTPPDSSFATALLVSGGIGTAPMFFLEKTLAASGKNVIHIIGGRSSGDLLLHN
HCCCCCCCCCCCCCHHEEEEEECCCCCHHHHHHHHHHHCCCCCEEEEEECCCCCCEEEEE
LSNCRTATDDGSTGFLGTAVDLLRHDLPELRQNGPLKVFSCGPNAMLRALAKFCREQNIP
CCCCCCCCCCCCCCHHHHHHHHHHHCHHHHHCCCCEEEEECCHHHHHHHHHHHHHHCCCC
CEVSLESVMGCGIGICYGCSIEVNAPDGGTETILLCREGAVINAERLVL
EEEEHHHHHCCCCEEEEECEEEEECCCCCCEEEEEEECCCEECHHEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7516791 [H]