| Definition | Chlorobium phaeobacteroides DSM 266 chromosome, complete genome. |
|---|---|
| Accession | NC_008639 |
| Length | 3,133,902 |
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The map label for this gene is asd [H]
Identifier: 119358059
GI number: 119358059
Start: 2618147
End: 2619169
Strand: Reverse
Name: asd [H]
Synonym: Cpha266_2287
Alternate gene names: 119358059
Gene position: 2619169-2618147 (Counterclockwise)
Preceding gene: 119358060
Following gene: 119358052
Centisome position: 83.58
GC content: 51.81
Gene sequence:
>1023_bases ATGAGTAATCCGGAAACCCGCTGTCGTGTAGCGGTGCTTGGTGCAACCGGCCTTGTCGGCCGAACCATGATTCAGGTTCT TGAAGAGAGAAATTTTCCTCTCACTGATCTTGTTCCTCTTGCTTCAAGCAGAAGTTCAGGTCAGTCGATACGATTCAGGG ATCAGGACTATATAATCAGCGAGCCCTCGCCTGAGGCGTTCAGAGATGTCGATATTGCATTGTTTTCAGCCGGCGCGACA GCAAGCCGTGAGTGGGCTCCCGTAGCCGCAGCAGCAGGGGCCGTGGTGATCGATAATTCGTCAGCATTCAGAATGGAGCC CGATGTGCCGCTGGTGGTGCCTGAAGTGAACCCTGAGGCTATTTTTTCACTTGACGGGAGACCTGAAAAGATCATTGCCA ACCCGAACTGTTCCACCATCCAGATGGTCGTGGTGCTCAAACCGCTTCATGATCGCTACGGGTTGCGCAGGGTTGTTGTT TCGACCTATCAGTCGGTTACCGGTAAAGGCAAGGCCGGACGCGATGCGCTTGAAAGCGAACTTGCCGGGGAAGCCCAGGA GTCGTTTACCCATTTTCATCAGATAGCCTTTAATGCGGTGCCTCAGATTGATATGTTCACCGATAACGGCTATACCAAAG AGGAGATGAAAATGGTAAACGAAACCAGAAAAATTATGGCTGACGACTCCCTTTCCGTCTCCCCGACGACAGTCAGAATT CCTGTATATGGCGGACATGGCGAATCGCTGAATATCGAACTTGAACGCGAATTCAGGATAGACGAAGTTCGCGCACTGCT TGAATGTGCACCAGGTATTGTTATGCAGGATAATCCTGCCGAAAGCATCTATCCGATGCCGCTGACCTCTTATGAGCGGG ATGAGGTGTTTGTGGGACGCCTGCGCCGTGATTACTGGCACCCTCAGACCCTGAACATGTGGATTGTTGCTGATAATCTC AGAAAAGGCGCGGCGACCAATGCCGTGCAGATCGCAGAGGTTATCATGGCGAAACGCAAGTAG
Upstream 100 bases:
>100_bases TGTGAAGGGTATGCAAGAGATGGACGTATAAAGGAGTATGCGGAATATCTCAATGATCATTCAGATAAACTTGTTTTGAA TTATTAAGAAACCATAACGT
Downstream 100 bases:
>100_bases CTCCGGTTTGTCGTAATGCAAGGGCCATCAGTGCCGTACTGATGGCCTGTATTGCGGATGAGGGCATTTCTTTTGTCGAA TCAACGCCGACAAGTGTGCC
Product: aspartate semialdehyde dehydrogenase
Products: NA
Alternate protein names: ASA dehydrogenase; ASADH [H]
Number of amino acids: Translated: 340; Mature: 339
Protein sequence:
>340_residues MSNPETRCRVAVLGATGLVGRTMIQVLEERNFPLTDLVPLASSRSSGQSIRFRDQDYIISEPSPEAFRDVDIALFSAGAT ASREWAPVAAAAGAVVIDNSSAFRMEPDVPLVVPEVNPEAIFSLDGRPEKIIANPNCSTIQMVVVLKPLHDRYGLRRVVV STYQSVTGKGKAGRDALESELAGEAQESFTHFHQIAFNAVPQIDMFTDNGYTKEEMKMVNETRKIMADDSLSVSPTTVRI PVYGGHGESLNIELEREFRIDEVRALLECAPGIVMQDNPAESIYPMPLTSYERDEVFVGRLRRDYWHPQTLNMWIVADNL RKGAATNAVQIAEVIMAKRK
Sequences:
>Translated_340_residues MSNPETRCRVAVLGATGLVGRTMIQVLEERNFPLTDLVPLASSRSSGQSIRFRDQDYIISEPSPEAFRDVDIALFSAGAT ASREWAPVAAAAGAVVIDNSSAFRMEPDVPLVVPEVNPEAIFSLDGRPEKIIANPNCSTIQMVVVLKPLHDRYGLRRVVV STYQSVTGKGKAGRDALESELAGEAQESFTHFHQIAFNAVPQIDMFTDNGYTKEEMKMVNETRKIMADDSLSVSPTTVRI PVYGGHGESLNIELEREFRIDEVRALLECAPGIVMQDNPAESIYPMPLTSYERDEVFVGRLRRDYWHPQTLNMWIVADNL RKGAATNAVQIAEVIMAKRK >Mature_339_residues SNPETRCRVAVLGATGLVGRTMIQVLEERNFPLTDLVPLASSRSSGQSIRFRDQDYIISEPSPEAFRDVDIALFSAGATA SREWAPVAAAAGAVVIDNSSAFRMEPDVPLVVPEVNPEAIFSLDGRPEKIIANPNCSTIQMVVVLKPLHDRYGLRRVVVS TYQSVTGKGKAGRDALESELAGEAQESFTHFHQIAFNAVPQIDMFTDNGYTKEEMKMVNETRKIMADDSLSVSPTTVRIP VYGGHGESLNIELEREFRIDEVRALLECAPGIVMQDNPAESIYPMPLTSYERDEVFVGRLRRDYWHPQTLNMWIVADNLR KGAATNAVQIAEVIMAKRK
Specific function: Unknown
COG id: COG0136
COG function: function code E; Aspartate-semialdehyde dehydrogenase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the aspartate-semialdehyde dehydrogenase family [H]
Homologues:
Organism=Escherichia coli, GI1788658, Length=334, Percent_Identity=35.9281437125749, Blast_Score=197, Evalue=8e-52, Organism=Saccharomyces cerevisiae, GI6320362, Length=386, Percent_Identity=29.0155440414508, Blast_Score=101, Evalue=2e-22,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000319 - InterPro: IPR012080 - InterPro: IPR005986 - InterPro: IPR016040 - InterPro: IPR000534 - InterPro: IPR012280 [H]
Pfam domain/function: PF01118 Semialdhyde_dh; PF02774 Semialdhyde_dhC [H]
EC number: =1.2.1.11 [H]
Molecular weight: Translated: 37669; Mature: 37538
Theoretical pI: Translated: 4.93; Mature: 4.93
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 3.5 %Met (Translated Protein) 4.4 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 3.2 %Met (Mature Protein) 4.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSNPETRCRVAVLGATGLVGRTMIQVLEERNFPLTDLVPLASSRSSGQSIRFRDQDYIIS CCCCCCEEEEEEEECCCHHHHHHHHHHHHCCCCHHHHHHCCCCCCCCCEEEEECCCEEEC EPSPEAFRDVDIALFSAGATASREWAPVAAAAGAVVIDNSSAFRMEPDVPLVVPEVNPEA CCCCHHHHHCEEEEEECCCCCCCCCCCHHHHCCEEEEECCCCEEECCCCCEEEECCCCCE IFSLDGRPEKIIANPNCSTIQMVVVLKPLHDRYGLRRVVVSTYQSVTGKGKAGRDALESE EEEECCCCCEEEECCCCCEEEEEEEEECHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHH LAGEAQESFTHFHQIAFNAVPQIDMFTDNGYTKEEMKMVNETRKIMADDSLSVSPTTVRI HCCHHHHHHHHHHHHHHHCCCCEEEEECCCCCHHHHHHHHHHHHHHCCCCCCCCCEEEEE PVYGGHGESLNIELEREFRIDEVRALLECAPGIVMQDNPAESIYPMPLTSYERDEVFVGR EEECCCCCEEEEEEECCCCHHHHHHHHHHCCCCEECCCCCCCCCCCCCCCCCCCHHHHHH LRRDYWHPQTLNMWIVADNLRKGAATNAVQIAEVIMAKRK HHHHCCCCCCEEEEEEECCCCCCCCCCHHHHHHHHHHCCC >Mature Secondary Structure SNPETRCRVAVLGATGLVGRTMIQVLEERNFPLTDLVPLASSRSSGQSIRFRDQDYIIS CCCCCEEEEEEEECCCHHHHHHHHHHHHCCCCHHHHHHCCCCCCCCCEEEEECCCEEEC EPSPEAFRDVDIALFSAGATASREWAPVAAAAGAVVIDNSSAFRMEPDVPLVVPEVNPEA CCCCHHHHHCEEEEEECCCCCCCCCCCHHHHCCEEEEECCCCEEECCCCCEEEECCCCCE IFSLDGRPEKIIANPNCSTIQMVVVLKPLHDRYGLRRVVVSTYQSVTGKGKAGRDALESE EEEECCCCCEEEECCCCCEEEEEEEEECHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHH LAGEAQESFTHFHQIAFNAVPQIDMFTDNGYTKEEMKMVNETRKIMADDSLSVSPTTVRI HCCHHHHHHHHHHHHHHHCCCCEEEEECCCCCHHHHHHHHHHHHHHCCCCCCCCCEEEEE PVYGGHGESLNIELEREFRIDEVRALLECAPGIVMQDNPAESIYPMPLTSYERDEVFVGR EEECCCCCEEEEEEECCCCHHHHHHHHHHCCCCEECCCCCCCCCCCCCCCCCCCHHHHHH LRRDYWHPQTLNMWIVADNLRKGAATNAVQIAEVIMAKRK HHHHCCCCCCEEEEEEECCCCCCCCCCHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9537320 [H]