Click here to switch to the map view.

The map label for this gene is ygdQ [C]

Identifier: 119357945

GI number: 119357945

Start: 2502573

End: 2503322

Strand: Direct

Name: ygdQ [C]

Synonym: Cpha266_2160

Alternate gene names: 119357945

Gene position: 2502573-2503322 (Clockwise)

Preceding gene: 119357934

Following gene: 119357946

Centisome position: 79.85

GC content: 46.8

Gene sequence:

>750_bases
ATGGAATGGATAACACAGCCTGAAGCATGGATTGCCCTTGCAACACTAACAGCGCTTGAAATAGTACTCGGTATTGACAA
CATTATCTTTATCTCCATTATTGTCGGCAGACTGCCTCAGGAGCAGCGTCAAAATGGTCGTCTGATCGGTCTCGGCCTTG
CCATGCTGACCCGTATTGCCCTTCTGCTCTCGATTACCTGGGTCATGGGACTGACAACCGGACTCTTTTCGGTACTTGAC
CATGAAGTATCAGGACGCGACATCATTCTTCTTGTCGGAGGACTTTTTCTGCTTGCCAAAAGCACCCATGAAATTCATCA
AAGCCTTGAAGGAAGCGAAGAGGAAAGTAAAACCGGTTCAACAACAGGTTTTGCCGTCACCATGATCCAGATTGCCGTGA
TTGACATTGTCTTCTCTCTTGACTCGGTCATAACAGCCGTAGGACTTGCAAAACATGTTGAAGTCATGATCATCGCCATT
ATCATCTCCATCGGCATCATGATGATCGCAGCAAAATCGATCAGCGATTTTGTGGAACGTCATCCAACCATCAAAATGCT
TGCCCTGAGCTTTCTCATACTGATCGGAGTAACGCTGCTCGCCGAAGGTGCCGGTTATGAAATACCGAAAGGCTACATCT
ATTTTGCCATGGCATTTTCAGTTACCGTTGAAATGCTCAACCTGCGACTGCGTGCGAAAACCTCGAAACCACTCCATCTG
CATAAAACACTGCCAGCAGAATCCGAATAA

Upstream 100 bases:

>100_bases
CACTTCTAAATAAGGAGACCTCCGTAAATTATCGTGAGTCCCGACTGGTCAGGAGAACTCGTGGAAAATTACTGGAAGTA
TCAATAAATCATACTGTTAT

Downstream 100 bases:

>100_bases
GAAAATCTGTCGATACCCTTTTTTCCGTGACGCTCTGCAATGGAAAAGCGTCACGGCTTTCGTCAAATCGAAAATTATTC
ATCCCGGGTTATATCCATTA

Product: integral membrane protein TerC

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 249; Mature: 249

Protein sequence:

>249_residues
MEWITQPEAWIALATLTALEIVLGIDNIIFISIIVGRLPQEQRQNGRLIGLGLAMLTRIALLLSITWVMGLTTGLFSVLD
HEVSGRDIILLVGGLFLLAKSTHEIHQSLEGSEEESKTGSTTGFAVTMIQIAVIDIVFSLDSVITAVGLAKHVEVMIIAI
IISIGIMMIAAKSISDFVERHPTIKMLALSFLILIGVTLLAEGAGYEIPKGYIYFAMAFSVTVEMLNLRLRAKTSKPLHL
HKTLPAESE

Sequences:

>Translated_249_residues
MEWITQPEAWIALATLTALEIVLGIDNIIFISIIVGRLPQEQRQNGRLIGLGLAMLTRIALLLSITWVMGLTTGLFSVLD
HEVSGRDIILLVGGLFLLAKSTHEIHQSLEGSEEESKTGSTTGFAVTMIQIAVIDIVFSLDSVITAVGLAKHVEVMIIAI
IISIGIMMIAAKSISDFVERHPTIKMLALSFLILIGVTLLAEGAGYEIPKGYIYFAMAFSVTVEMLNLRLRAKTSKPLHL
HKTLPAESE
>Mature_249_residues
MEWITQPEAWIALATLTALEIVLGIDNIIFISIIVGRLPQEQRQNGRLIGLGLAMLTRIALLLSITWVMGLTTGLFSVLD
HEVSGRDIILLVGGLFLLAKSTHEIHQSLEGSEEESKTGSTTGFAVTMIQIAVIDIVFSLDSVITAVGLAKHVEVMIIAI
IISIGIMMIAAKSISDFVERHPTIKMLALSFLILIGVTLLAEGAGYEIPKGYIYFAMAFSVTVEMLNLRLRAKTSKPLHL
HKTLPAESE

Specific function: Unknown

COG id: COG0861

COG function: function code P; Membrane protein TerC, possibly involved in tellurium resistance

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0053 family [H]

Homologues:

Organism=Escherichia coli, GI1789197, Length=236, Percent_Identity=58.4745762711864, Blast_Score=255, Evalue=2e-69,
Organism=Escherichia coli, GI1788119, Length=250, Percent_Identity=46.4, Blast_Score=235, Evalue=2e-63,
Organism=Escherichia coli, GI87082033, Length=228, Percent_Identity=50, Blast_Score=211, Evalue=3e-56,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005496 [H]

Pfam domain/function: PF03741 TerC [H]

EC number: NA

Molecular weight: Translated: 27103; Mature: 27103

Theoretical pI: Translated: 5.88; Mature: 5.88

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
4.0 %Met     (Translated Protein)
4.0 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
4.0 %Met     (Mature Protein)
4.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEWITQPEAWIALATLTALEIVLGIDNIIFISIIVGRLPQEQRQNGRLIGLGLAMLTRIA
CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHCCCEEEHHHHHHHHHH
LLLSITWVMGLTTGLFSVLDHEVSGRDIILLVGGLFLLAKSTHEIHQSLEGSEEESKTGS
HHHHHHHHHHHHHHHHHHHHCCCCCCEEEHHHHHHHHHHHHHHHHHHHHCCCCHHHCCCC
TTGFAVTMIQIAVIDIVFSLDSVITAVGLAKHVEVMIIAIIISIGIMMIAAKSISDFVER
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
HPTIKMLALSFLILIGVTLLAEGAGYEIPKGYIYFAMAFSVTVEMLNLRLRAKTSKPLHL
CCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHEECCCCCEEE
HKTLPAESE
EECCCCCCC
>Mature Secondary Structure
MEWITQPEAWIALATLTALEIVLGIDNIIFISIIVGRLPQEQRQNGRLIGLGLAMLTRIA
CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHCCCEEEHHHHHHHHHH
LLLSITWVMGLTTGLFSVLDHEVSGRDIILLVGGLFLLAKSTHEIHQSLEGSEEESKTGS
HHHHHHHHHHHHHHHHHHHHCCCCCCEEEHHHHHHHHHHHHHHHHHHHHCCCCHHHCCCC
TTGFAVTMIQIAVIDIVFSLDSVITAVGLAKHVEVMIIAIIISIGIMMIAAKSISDFVER
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
HPTIKMLALSFLILIGVTLLAEGAGYEIPKGYIYFAMAFSVTVEMLNLRLRAKTSKPLHL
CCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHEECCCCCEEE
HKTLPAESE
EECCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]