| Definition | Chlorobium phaeobacteroides DSM 266 chromosome, complete genome. |
|---|---|
| Accession | NC_008639 |
| Length | 3,133,902 |
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The map label for this gene is 119357926
Identifier: 119357926
GI number: 119357926
Start: 2479078
End: 2479548
Strand: Reverse
Name: 119357926
Synonym: Cpha266_2141
Alternate gene names: NA
Gene position: 2479548-2479078 (Counterclockwise)
Preceding gene: 119357927
Following gene: 119357925
Centisome position: 79.12
GC content: 48.41
Gene sequence:
>471_bases ATGTCATTTCCGGTTAACATTATGGTTGAACGGGAGTTTTATACCTCCTGTTCTCCTCAGAAGGTCTTTCTTCTGCTTGC CGATGTTCCCCGTTCCGCCTCCCATTTTCCGAAAGTAGATCAGCTTGTTGATCTTGGGGGCAACGCTTATCGCTGGGAGA TGGAAAAGATAGGTATCGGCAGCTATACCCTTCAGCAGACGATCTATGCCTGTCGATACAATGCTGATGAGGATGCGCTC AAGGTATTCTGGACGTCACTTCCCGGAGTCGGCAATGCCATCGTCAATGGCGAATGGAACCTCACTCCGAAAGATGGGGG CACCAGGATAAACCTTAAAACATCAGGCGATCTTACCGTCGATTTCCCTTCGTTTCTGCAATTCATTCTCTCTCCGCTGG TTGTCATGGAGTTTACCGGCATGATTGACCGCTACATTGCAAATCTTCAGGAGAGTTTCAGCAAGTTCTGA
Upstream 100 bases:
>100_bases TCACTTCCGGGGTGATGTCTATAACAGGGATAACGATGTTCTCAAAGCGCTGAACAAGTCTCTTCCTGAATTTAAAACGG AAAGCTGCGGCTTATAGATA
Downstream 100 bases:
>100_bases GTTTCCGTCTTATTTGCATGGTGTCGGAACGAAAACAGTCTGGTTTCATGTTACGCGTAACATGTCATACGTATGATTGT TGTCGTTCAACAAGAAAGAG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 156; Mature: 155
Protein sequence:
>156_residues MSFPVNIMVEREFYTSCSPQKVFLLLADVPRSASHFPKVDQLVDLGGNAYRWEMEKIGIGSYTLQQTIYACRYNADEDAL KVFWTSLPGVGNAIVNGEWNLTPKDGGTRINLKTSGDLTVDFPSFLQFILSPLVVMEFTGMIDRYIANLQESFSKF
Sequences:
>Translated_156_residues MSFPVNIMVEREFYTSCSPQKVFLLLADVPRSASHFPKVDQLVDLGGNAYRWEMEKIGIGSYTLQQTIYACRYNADEDAL KVFWTSLPGVGNAIVNGEWNLTPKDGGTRINLKTSGDLTVDFPSFLQFILSPLVVMEFTGMIDRYIANLQESFSKF >Mature_155_residues SFPVNIMVEREFYTSCSPQKVFLLLADVPRSASHFPKVDQLVDLGGNAYRWEMEKIGIGSYTLQQTIYACRYNADEDALK VFWTSLPGVGNAIVNGEWNLTPKDGGTRINLKTSGDLTVDFPSFLQFILSPLVVMEFTGMIDRYIANLQESFSKF
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 17592; Mature: 17461
Theoretical pI: Translated: 4.68; Mature: 4.68
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 3.2 %Met (Translated Protein) 4.5 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 3.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSFPVNIMVEREFYTSCSPQKVFLLLADVPRSASHFPKVDQLVDLGGNAYRWEMEKIGIG CCCCEEEEEEECHHCCCCCCEEEEEEECCCCCCCCCCCHHHHHHCCCCEEEEEEECCCCC SYTLQQTIYACRYNADEDALKVFWTSLPGVGNAIVNGEWNLTPKDGGTRINLKTSGDLTV HHHHHHHHHHHCCCCCHHHHHHHHHCCCCCCCEEECCEEEECCCCCCEEEEEEECCCEEE DFPSFLQFILSPLVVMEFTGMIDRYIANLQESFSKF CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure SFPVNIMVEREFYTSCSPQKVFLLLADVPRSASHFPKVDQLVDLGGNAYRWEMEKIGIG CCCEEEEEEECHHCCCCCCEEEEEEECCCCCCCCCCCHHHHHHCCCCEEEEEEECCCCC SYTLQQTIYACRYNADEDALKVFWTSLPGVGNAIVNGEWNLTPKDGGTRINLKTSGDLTV HHHHHHHHHHHCCCCCHHHHHHHHHCCCCCCCEEECCEEEECCCCCCEEEEEEECCCEEE DFPSFLQFILSPLVVMEFTGMIDRYIANLQESFSKF CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA