| Definition | Chlorobium phaeobacteroides DSM 266 chromosome, complete genome. |
|---|---|
| Accession | NC_008639 |
| Length | 3,133,902 |
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The map label for this gene is menB [H]
Identifier: 119357883
GI number: 119357883
Start: 2424657
End: 2425478
Strand: Direct
Name: menB [H]
Synonym: Cpha266_2091
Alternate gene names: 119357883
Gene position: 2424657-2425478 (Clockwise)
Preceding gene: 119357882
Following gene: 119357884
Centisome position: 77.37
GC content: 54.5
Gene sequence:
>822_bases ATGGGCACAATCTCATGGATACCTGCCGCTGAATTTACCGATATTCTCTATCACAAGGCCGACGGGATTGCTAAAATAAC CATCAATCGCCCGGAAGTCCGCAACGCGTTCCGGCCGCAAACCGTCGAAGAGATGATCAAGGCTCTTTCGGATGCAAGAA ATGACGAGAAAATCGGCGTCGTGATTCTTACCGGTGCCGGCGACCTTGCGTTCTGCTCAGGGGGCGACCAGAAAATCCGC GGATATGCCGGCTATGCTGATGCCAAAGGGGTAAACCGGCTCAATGTGCTTGATTTCCAGCGCGATATCAGAACCTGTCC CAAACCGGTCATTGCCATGGTAGCAGGCTATGCGATCGGAGGCGGCCATGTGCTCCACATGCTGTGCGATCTTACCATTG CCGCCGACAACGCCATTTTCGGTCAGACCGGGCCGAAAGTAGGCTCTTTTGACGGAGGCTGGGGCGCAAGCTACATGGCC AGACTTGTAGGTCAGAAAAAGGCCAGGGAGATCTGGTATCTCTGCCGCCAGTACAATGCTGCCGACGCTCTTGCCATGGG ACTGGTCAATACCGTTGTTCCGCTTGCCCGGCTTGAAGAAGAGACCGTTCAGTGGTGCCGCGAAATTCTCGAAAATTCCC CTCTGGCCATCCGCTGCCTGAAATCGGCCCTCAATGCGGATTGCGATGGACAGGCCGGCCTGCAGGAGCTTGCCGGAAAC GCCACCATGCTCTACTATATGAGCGAAGAGGCTCAGGAGGGAAAAAATGCATTCGTCGAAAAAAGAAAGCCTGATTTCAC TAAATTCCCGAAACGCCCTTGA
Upstream 100 bases:
>100_bases AGATCTTTGCCGATTGCGGCCACGCCCTGCATATTGAAAACAGGGAGGAGTTTACCAGCCGCCTGAAGGTTTTTTTCAAA CAGTAAGAACATCAATCACT
Downstream 100 bases:
>100_bases ATGCGTCATTTTTACACCTTTACCGGTATAGCATCCCTTTCAATGAGCCGGTTACCGTAAGAAACCATCGGCTTCTGAAC AGAGAGGGGATAATTATCGC
Product: naphthoate synthase
Products: NA
Alternate protein names: DHNA-CoA synthase [H]
Number of amino acids: Translated: 273; Mature: 272
Protein sequence:
>273_residues MGTISWIPAAEFTDILYHKADGIAKITINRPEVRNAFRPQTVEEMIKALSDARNDEKIGVVILTGAGDLAFCSGGDQKIR GYAGYADAKGVNRLNVLDFQRDIRTCPKPVIAMVAGYAIGGGHVLHMLCDLTIAADNAIFGQTGPKVGSFDGGWGASYMA RLVGQKKAREIWYLCRQYNAADALAMGLVNTVVPLARLEEETVQWCREILENSPLAIRCLKSALNADCDGQAGLQELAGN ATMLYYMSEEAQEGKNAFVEKRKPDFTKFPKRP
Sequences:
>Translated_273_residues MGTISWIPAAEFTDILYHKADGIAKITINRPEVRNAFRPQTVEEMIKALSDARNDEKIGVVILTGAGDLAFCSGGDQKIR GYAGYADAKGVNRLNVLDFQRDIRTCPKPVIAMVAGYAIGGGHVLHMLCDLTIAADNAIFGQTGPKVGSFDGGWGASYMA RLVGQKKAREIWYLCRQYNAADALAMGLVNTVVPLARLEEETVQWCREILENSPLAIRCLKSALNADCDGQAGLQELAGN ATMLYYMSEEAQEGKNAFVEKRKPDFTKFPKRP >Mature_272_residues GTISWIPAAEFTDILYHKADGIAKITINRPEVRNAFRPQTVEEMIKALSDARNDEKIGVVILTGAGDLAFCSGGDQKIRG YAGYADAKGVNRLNVLDFQRDIRTCPKPVIAMVAGYAIGGGHVLHMLCDLTIAADNAIFGQTGPKVGSFDGGWGASYMAR LVGQKKAREIWYLCRQYNAADALAMGLVNTVVPLARLEEETVQWCREILENSPLAIRCLKSALNADCDGQAGLQELAGNA TMLYYMSEEAQEGKNAFVEKRKPDFTKFPKRP
Specific function: Converts o-succinylbenzoyl-CoA (OSB-CoA) to 1,4- dihydroxy-2-naphthoyl-CoA (DHNA-CoA) [H]
COG id: COG0447
COG function: function code H; Dihydroxynaphthoic acid synthase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the enoyl-CoA hydratase/isomerase family [H]
Homologues:
Organism=Homo sapiens, GI194097323, Length=271, Percent_Identity=32.4723247232472, Blast_Score=125, Evalue=3e-29, Organism=Homo sapiens, GI31542718, Length=260, Percent_Identity=29.2307692307692, Blast_Score=96, Evalue=3e-20, Organism=Homo sapiens, GI45643119, Length=221, Percent_Identity=29.4117647058824, Blast_Score=86, Evalue=4e-17, Organism=Homo sapiens, GI260275230, Length=221, Percent_Identity=29.4117647058824, Blast_Score=86, Evalue=4e-17, Organism=Homo sapiens, GI260274832, Length=221, Percent_Identity=29.4117647058824, Blast_Score=85, Evalue=6e-17, Organism=Homo sapiens, GI4502327, Length=260, Percent_Identity=29.2307692307692, Blast_Score=79, Evalue=6e-15, Organism=Homo sapiens, GI25453481, Length=264, Percent_Identity=25.7575757575758, Blast_Score=76, Evalue=3e-14, Organism=Homo sapiens, GI51538573, Length=264, Percent_Identity=25.7575757575758, Blast_Score=76, Evalue=3e-14, Organism=Homo sapiens, GI4757966, Length=215, Percent_Identity=26.5116279069767, Blast_Score=75, Evalue=5e-14, Organism=Homo sapiens, GI51538581, Length=215, Percent_Identity=26.5116279069767, Blast_Score=75, Evalue=5e-14, Organism=Homo sapiens, GI4757968, Length=264, Percent_Identity=26.5151515151515, Blast_Score=75, Evalue=5e-14, Organism=Homo sapiens, GI49355787, Length=264, Percent_Identity=26.5151515151515, Blast_Score=75, Evalue=5e-14, Organism=Homo sapiens, GI70995211, Length=220, Percent_Identity=29.0909090909091, Blast_Score=69, Evalue=3e-12, Organism=Homo sapiens, GI37594469, Length=154, Percent_Identity=26.6233766233766, Blast_Score=68, Evalue=7e-12, Organism=Homo sapiens, GI37594471, Length=154, Percent_Identity=26.6233766233766, Blast_Score=68, Evalue=1e-11, Organism=Escherichia coli, GI1788597, Length=273, Percent_Identity=78.3882783882784, Blast_Score=451, Evalue=1e-128, Organism=Escherichia coli, GI1787659, Length=257, Percent_Identity=30.7392996108949, Blast_Score=107, Evalue=9e-25, Organism=Escherichia coli, GI87082183, Length=251, Percent_Identity=30.6772908366534, Blast_Score=103, Evalue=9e-24, Organism=Escherichia coli, GI221142681, Length=254, Percent_Identity=31.1023622047244, Blast_Score=98, Evalue=6e-22, Organism=Escherichia coli, GI1787660, Length=265, Percent_Identity=29.811320754717, Blast_Score=84, Evalue=8e-18, Organism=Escherichia coli, GI1788682, Length=205, Percent_Identity=27.8048780487805, Blast_Score=69, Evalue=3e-13, Organism=Caenorhabditis elegans, GI25145438, Length=250, Percent_Identity=33.6, Blast_Score=120, Evalue=1e-27, Organism=Caenorhabditis elegans, GI17540714, Length=220, Percent_Identity=35, Blast_Score=117, Evalue=6e-27, Organism=Caenorhabditis elegans, GI17554946, Length=247, Percent_Identity=31.5789473684211, Blast_Score=113, Evalue=8e-26, Organism=Caenorhabditis elegans, GI17535521, Length=210, Percent_Identity=26.1904761904762, Blast_Score=76, Evalue=2e-14, Organism=Caenorhabditis elegans, GI17549921, Length=210, Percent_Identity=24.7619047619048, Blast_Score=75, Evalue=3e-14, Organism=Caenorhabditis elegans, GI17536985, Length=222, Percent_Identity=25.6756756756757, Blast_Score=73, Evalue=1e-13, Organism=Caenorhabditis elegans, GI25144160, Length=221, Percent_Identity=27.6018099547511, Blast_Score=67, Evalue=8e-12, Organism=Caenorhabditis elegans, GI25144157, Length=221, Percent_Identity=27.6018099547511, Blast_Score=67, Evalue=8e-12, Organism=Caenorhabditis elegans, GI17534483, Length=216, Percent_Identity=25.9259259259259, Blast_Score=66, Evalue=2e-11, Organism=Caenorhabditis elegans, GI17560910, Length=190, Percent_Identity=28.4210526315789, Blast_Score=65, Evalue=3e-11, Organism=Drosophila melanogaster, GI20129971, Length=244, Percent_Identity=34.8360655737705, Blast_Score=117, Evalue=1e-26, Organism=Drosophila melanogaster, GI24653477, Length=244, Percent_Identity=34.8360655737705, Blast_Score=117, Evalue=1e-26, Organism=Drosophila melanogaster, GI24653139, Length=281, Percent_Identity=28.8256227758007, Blast_Score=110, Evalue=9e-25, Organism=Drosophila melanogaster, GI24654903, Length=200, Percent_Identity=28.5, Blast_Score=75, Evalue=4e-14, Organism=Drosophila melanogaster, GI24650670, Length=184, Percent_Identity=29.8913043478261, Blast_Score=72, Evalue=5e-13, Organism=Drosophila melanogaster, GI21357171, Length=191, Percent_Identity=28.7958115183246, Blast_Score=71, Evalue=8e-13, Organism=Drosophila melanogaster, GI19922422, Length=258, Percent_Identity=24.031007751938, Blast_Score=65, Evalue=7e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR014748 - InterPro: IPR001753 - InterPro: IPR018376 - InterPro: IPR010198 [H]
Pfam domain/function: PF00378 ECH [H]
EC number: =4.1.3.36 [H]
Molecular weight: Translated: 29838; Mature: 29706
Theoretical pI: Translated: 7.27; Mature: 7.27
Prosite motif: PS00166 ENOYL_COA_HYDRATASE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.6 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 5.5 %Cys+Met (Translated Protein) 2.6 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 5.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGTISWIPAAEFTDILYHKADGIAKITINRPEVRNAFRPQTVEEMIKALSDARNDEKIGV CCCCCCCCCHHHHHHHHHCCCCEEEEEECCHHHHHCCCCHHHHHHHHHHHCCCCCCCEEE VILTGAGDLAFCSGGDQKIRGYAGYADAKGVNRLNVLDFQRDIRTCPKPVIAMVAGYAIG EEEECCCCEEEECCCCHHHCEECCCCCCCCCCCCHHHHHHHHHHHCCHHHHHHHHHHCCC GGHVLHMLCDLTIAADNAIFGQTGPKVGSFDGGWGASYMARLVGQKKAREIWYLCRQYNA CHHHHHHHHHHHHCCCCCEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCH ADALAMGLVNTVVPLARLEEETVQWCREILENSPLAIRCLKSALNADCDGQAGLQELAGN HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCCHHHHHHCCC ATMLYYMSEEAQEGKNAFVEKRKPDFTKFPKRP CEEEEEECCHHHHHHHHHHHCCCCCCCCCCCCC >Mature Secondary Structure GTISWIPAAEFTDILYHKADGIAKITINRPEVRNAFRPQTVEEMIKALSDARNDEKIGV CCCCCCCCHHHHHHHHHCCCCEEEEEECCHHHHHCCCCHHHHHHHHHHHCCCCCCCEEE VILTGAGDLAFCSGGDQKIRGYAGYADAKGVNRLNVLDFQRDIRTCPKPVIAMVAGYAIG EEEECCCCEEEECCCCHHHCEECCCCCCCCCCCCHHHHHHHHHHHCCHHHHHHHHHHCCC GGHVLHMLCDLTIAADNAIFGQTGPKVGSFDGGWGASYMARLVGQKKAREIWYLCRQYNA CHHHHHHHHHHHHCCCCCEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCH ADALAMGLVNTVVPLARLEEETVQWCREILENSPLAIRCLKSALNADCDGQAGLQELAGN HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCCHHHHHHCCC ATMLYYMSEEAQEGKNAFVEKRKPDFTKFPKRP CEEEEEECCHHHHHHHHHHHCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 7542800 [H]