| Definition | Chlorobium phaeobacteroides DSM 266 chromosome, complete genome. |
|---|---|
| Accession | NC_008639 |
| Length | 3,133,902 |
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The map label for this gene is 119357860
Identifier: 119357860
GI number: 119357860
Start: 2401847
End: 2402602
Strand: Reverse
Name: 119357860
Synonym: Cpha266_2068
Alternate gene names: NA
Gene position: 2402602-2401847 (Counterclockwise)
Preceding gene: 119357861
Following gene: 119357859
Centisome position: 76.66
GC content: 47.35
Gene sequence:
>756_bases ATGGGCGAATTTGATAGACCTGAATGGGTTCCTTCGGAGGAAGAGCTTAGAGCTGAATTGTGTAATGCAAGAGAAATCGA TTGGCCTGCCGAGGCGTCGAAGGAGGCCAATCGCCGTGAACAATGGATGATAACCGCCCCTGATGAATATAGCGAGTATA TGCAAGGGCTTTCAAAGGATGCTCGTAACTTTCCTGAAATACCACTGCGCTACATGGATGCTCCCGCTGATTGGATGGGG AAGTCTCTTGAAGCCATTCTCAATCAGATACAGAGCAGTCCAGAGGAGTATCAGGGGTATATCACGGGAATGGTGAACCG ATATTTGACCGCATGTTTCAAGCGGCTCGGTGGGAAATGGCCTTCAGACATATGGGATGGTTCCGGGAATCCATACTTTA CTCGCATTTGTTACGATTTTTGCTGCCCTGAATGGGTTGGCGATGATGATTTATTGAGAAAGATTATTGTCCTCCAGAAG CTTCAAGCCATGATTTCGGAGCGAGTGGGGCAGGCGGGAGGCTTAAAGAGTGATATTCCGGGAGGCTTTGAAGGGTTCTG CGTTGCAAAGATTAATGAGATGCCGGAAACAGTCCGTGACGCATTTCTTAATACCAATTCAGGCGATAGCTCTTATTACA AAGACGGGCAGGAATGGAAGGCTGAGTATAACCTTACAGCAACGAGAAAGATAAAGAGCTATCAGTCACCGATCAGTCGG GCAAAGGCCTATTGTAAATCGCTATCTGAGGATTGA
Upstream 100 bases:
>100_bases TTCAGGGCGGTATGAGTTCGGGGGCCGTGAGTACACAGCAGCAGAGTTGGCAATTGAGGTTTCGGGCGGCGATTAACATA AAACGGGATCGGGGGCGAGT
Downstream 100 bases:
>100_bases TTGCTGGAATTGAGTCTTGAGTCAATTCTCAATTCTTCACTGCCTATAAATCCATTAGTAACATGCACTTGCAGTTAACA GAACTTCAAGCAAACATGTT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 251; Mature: 250
Protein sequence:
>251_residues MGEFDRPEWVPSEEELRAELCNAREIDWPAEASKEANRREQWMITAPDEYSEYMQGLSKDARNFPEIPLRYMDAPADWMG KSLEAILNQIQSSPEEYQGYITGMVNRYLTACFKRLGGKWPSDIWDGSGNPYFTRICYDFCCPEWVGDDDLLRKIIVLQK LQAMISERVGQAGGLKSDIPGGFEGFCVAKINEMPETVRDAFLNTNSGDSSYYKDGQEWKAEYNLTATRKIKSYQSPISR AKAYCKSLSED
Sequences:
>Translated_251_residues MGEFDRPEWVPSEEELRAELCNAREIDWPAEASKEANRREQWMITAPDEYSEYMQGLSKDARNFPEIPLRYMDAPADWMG KSLEAILNQIQSSPEEYQGYITGMVNRYLTACFKRLGGKWPSDIWDGSGNPYFTRICYDFCCPEWVGDDDLLRKIIVLQK LQAMISERVGQAGGLKSDIPGGFEGFCVAKINEMPETVRDAFLNTNSGDSSYYKDGQEWKAEYNLTATRKIKSYQSPISR AKAYCKSLSED >Mature_250_residues GEFDRPEWVPSEEELRAELCNAREIDWPAEASKEANRREQWMITAPDEYSEYMQGLSKDARNFPEIPLRYMDAPADWMGK SLEAILNQIQSSPEEYQGYITGMVNRYLTACFKRLGGKWPSDIWDGSGNPYFTRICYDFCCPEWVGDDDLLRKIIVLQKL QAMISERVGQAGGLKSDIPGGFEGFCVAKINEMPETVRDAFLNTNSGDSSYYKDGQEWKAEYNLTATRKIKSYQSPISRA KAYCKSLSED
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 28723; Mature: 28592
Theoretical pI: Translated: 4.46; Mature: 4.46
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.8 %Cys (Translated Protein) 3.2 %Met (Translated Protein) 6.0 %Cys+Met (Translated Protein) 2.8 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 5.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGEFDRPEWVPSEEELRAELCNAREIDWPAEASKEANRREQWMITAPDEYSEYMQGLSKD CCCCCCCCCCCCHHHHHHHHHCCCCCCCCHHHHHHHHHHHCEEEECCHHHHHHHHHHHHH ARNFPEIPLRYMDAPADWMGKSLEAILNQIQSSPEEYQGYITGMVNRYLTACFKRLGGKW HHCCCCCCHHHCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCC PSDIWDGSGNPYFTRICYDFCCPEWVGDDDLLRKIIVLQKLQAMISERVGQAGGLKSDIP CCHHCCCCCCCHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC GGFEGFCVAKINEMPETVRDAFLNTNSGDSSYYKDGQEWKAEYNLTATRKIKSYQSPISR CCCCCEEHHHHHHHHHHHHHHHHCCCCCCCHHHCCCHHHHHHCCCHHHHHHHHHHHHHHH AKAYCKSLSED HHHHHHHHCCC >Mature Secondary Structure GEFDRPEWVPSEEELRAELCNAREIDWPAEASKEANRREQWMITAPDEYSEYMQGLSKD CCCCCCCCCCCHHHHHHHHHCCCCCCCCHHHHHHHHHHHCEEEECCHHHHHHHHHHHHH ARNFPEIPLRYMDAPADWMGKSLEAILNQIQSSPEEYQGYITGMVNRYLTACFKRLGGKW HHCCCCCCHHHCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCC PSDIWDGSGNPYFTRICYDFCCPEWVGDDDLLRKIIVLQKLQAMISERVGQAGGLKSDIP CCHHCCCCCCCHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC GGFEGFCVAKINEMPETVRDAFLNTNSGDSSYYKDGQEWKAEYNLTATRKIKSYQSPISR CCCCCEEHHHHHHHHHHHHHHHHCCCCCCCHHHCCCHHHHHHCCCHHHHHHHHHHHHHHH AKAYCKSLSED HHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA