| Definition | Chlorobium phaeobacteroides DSM 266 chromosome, complete genome. |
|---|---|
| Accession | NC_008639 |
| Length | 3,133,902 |
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The map label for this gene is 119357845
Identifier: 119357845
GI number: 119357845
Start: 2376349
End: 2377212
Strand: Reverse
Name: 119357845
Synonym: Cpha266_2053
Alternate gene names: NA
Gene position: 2377212-2376349 (Counterclockwise)
Preceding gene: 119357846
Following gene: 119357844
Centisome position: 75.85
GC content: 45.49
Gene sequence:
>864_bases ATGTCAACAAACCCGATTCAGCAGAAAATGCGAGTCCAAAGTTTGAGAAGATTTGCCGAGGGGATTGTTGGGCGGAAAAA TTTTGGATGGTGGTCGTTGCTTTATGCGGCTTTATTTTTTGTTGTTGCCGGATGGTTTGCTGACGGGTTGGCAGAGTTTG TCGATTACGTTTTTTCTGGCCAGAAGAGATGGATTCTGAATTATAAACTGATTGTCTCTGCAGGGCTGCTTTTCCTTTTT GGCTGGAGTATACGTAACATCGCGCATGACGATCATGACGAAATCGCAGTGAACAGGGATCAGCCTAAACCGGTAAGAGT GCTCGGTTTGTTTCTCAGTAATTTTCTCGTCAGGGTTGATCAGACTTCACACTCAGGAAACAGTGGTGACGGTTTTAACA AGAGCGCCCTTGAAAGAGCTGTTTCAGACAGTACTTTCAACAGAACGATGCTTCTTGATACCACATGGGAAATGCCTTTT CGTGCAATCGAGTATCATGCATCATCTCTTGAGCGCATTGAACTTTTCACCTCTTCAGGCGGGAAATGTTCAAGTGCCGA GAGCGGATTGTTTATCCGGCTTGTTGCAGTTCTTTATCCGGATGTGTCCGTGACCGAACAGATAGTGGATTTCGAGGATC TTGAAGTGGTGTTCAAGGCTGTTGAAAAACTCTATGCCGATGCTGAAGCTTCCGGATTGAAAGCTCAGGATGTTCTGGTC GATATAACCGGAGGTCAAAAACCAAACAGCATTGCCGCAGCAATAGCGACGCTTGCGGTTGGTAGGCAGTTTCAGTATAT CTCAACCGGCGATAAGGTTGTCAGGAGTTACGATGTTGGCTATTTTCAGGAAGATTTATCATGA
Upstream 100 bases:
>100_bases CACGATCTTTATCATAGAGCGTGATGTGTTATTCGGGAGAAAAGTGTTTATTTCCATGTGATCAATCCCTGGAGTATTTT CAAAAGAAAACAGCACATCA
Downstream 100 bases:
>100_bases TGCAGTGAGCCCTGAAGAGTCCTAACGGCACGTATTCTATGAACGAATTTTTCACACAGAACAATCTCCTGGTCGTATTC TGGTATACAGCGGGTATTGT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 287; Mature: 286
Protein sequence:
>287_residues MSTNPIQQKMRVQSLRRFAEGIVGRKNFGWWSLLYAALFFVVAGWFADGLAEFVDYVFSGQKRWILNYKLIVSAGLLFLF GWSIRNIAHDDHDEIAVNRDQPKPVRVLGLFLSNFLVRVDQTSHSGNSGDGFNKSALERAVSDSTFNRTMLLDTTWEMPF RAIEYHASSLERIELFTSSGGKCSSAESGLFIRLVAVLYPDVSVTEQIVDFEDLEVVFKAVEKLYADAEASGLKAQDVLV DITGGQKPNSIAAAIATLAVGRQFQYISTGDKVVRSYDVGYFQEDLS
Sequences:
>Translated_287_residues MSTNPIQQKMRVQSLRRFAEGIVGRKNFGWWSLLYAALFFVVAGWFADGLAEFVDYVFSGQKRWILNYKLIVSAGLLFLF GWSIRNIAHDDHDEIAVNRDQPKPVRVLGLFLSNFLVRVDQTSHSGNSGDGFNKSALERAVSDSTFNRTMLLDTTWEMPF RAIEYHASSLERIELFTSSGGKCSSAESGLFIRLVAVLYPDVSVTEQIVDFEDLEVVFKAVEKLYADAEASGLKAQDVLV DITGGQKPNSIAAAIATLAVGRQFQYISTGDKVVRSYDVGYFQEDLS >Mature_286_residues STNPIQQKMRVQSLRRFAEGIVGRKNFGWWSLLYAALFFVVAGWFADGLAEFVDYVFSGQKRWILNYKLIVSAGLLFLFG WSIRNIAHDDHDEIAVNRDQPKPVRVLGLFLSNFLVRVDQTSHSGNSGDGFNKSALERAVSDSTFNRTMLLDTTWEMPFR AIEYHASSLERIELFTSSGGKCSSAESGLFIRLVAVLYPDVSVTEQIVDFEDLEVVFKAVEKLYADAEASGLKAQDVLVD ITGGQKPNSIAAAIATLAVGRQFQYISTGDKVVRSYDVGYFQEDLS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 32040; Mature: 31908
Theoretical pI: Translated: 5.17; Mature: 5.17
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 1.7 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 1.0 %Met (Mature Protein) 1.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSTNPIQQKMRVQSLRRFAEGIVGRKNFGWWSLLYAALFFVVAGWFADGLAEFVDYVFSG CCCCHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC QKRWILNYKLIVSAGLLFLFGWSIRNIAHDDHDEIAVNRDQPKPVRVLGLFLSNFLVRVD CCEEEEEHHHHHHHHHHHHHHHHHHHCCCCCCCCEEECCCCCCHHHHHHHHHHHHHEEEE QTSHSGNSGDGFNKSALERAVSDSTFNRTMLLDTTWEMPFRAIEYHASSLERIELFTSSG CCCCCCCCCCCCCHHHHHHHHCCCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHEEECCC GKCSSAESGLFIRLVAVLYPDVSVTEQIVDFEDLEVVFKAVEKLYADAEASGLKAQDVLV CCCCCCCCCHHHHHHHHHCCCHHHHHHHHCHHHHHHHHHHHHHHHHCCCCCCCEECCEEE DITGGQKPNSIAAAIATLAVGRQFQYISTGDKVVRSYDVGYFQEDLS EECCCCCCHHHHHHHHHHHHCCCEEEECCHHHHHHHHCCCHHHHHCC >Mature Secondary Structure STNPIQQKMRVQSLRRFAEGIVGRKNFGWWSLLYAALFFVVAGWFADGLAEFVDYVFSG CCCHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC QKRWILNYKLIVSAGLLFLFGWSIRNIAHDDHDEIAVNRDQPKPVRVLGLFLSNFLVRVD CCEEEEEHHHHHHHHHHHHHHHHHHHCCCCCCCCEEECCCCCCHHHHHHHHHHHHHEEEE QTSHSGNSGDGFNKSALERAVSDSTFNRTMLLDTTWEMPFRAIEYHASSLERIELFTSSG CCCCCCCCCCCCCHHHHHHHHCCCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHEEECCC GKCSSAESGLFIRLVAVLYPDVSVTEQIVDFEDLEVVFKAVEKLYADAEASGLKAQDVLV CCCCCCCCCHHHHHHHHHCCCHHHHHHHHCHHHHHHHHHHHHHHHHCCCCCCCEECCEEE DITGGQKPNSIAAAIATLAVGRQFQYISTGDKVVRSYDVGYFQEDLS EECCCCCCHHHHHHHHHHHHCCCEEEECCHHHHHHHHCCCHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 9537320 [H]