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The map label for this gene is 119357840

Identifier: 119357840

GI number: 119357840

Start: 2370177

End: 2371034

Strand: Reverse

Name: 119357840

Synonym: Cpha266_2048

Alternate gene names: NA

Gene position: 2371034-2370177 (Counterclockwise)

Preceding gene: 119357841

Following gene: 119357839

Centisome position: 75.66

GC content: 38.58

Gene sequence:

>858_bases
ATGGCAGACATAGAAAGACAGATTAAATTGCTCGGTTATATCAAAATTACAGGTATAATTGAAGCTTTAACCGGGTTGCA
TATTGGCGGAACAGCGGATTCAATAGATAAAGGCGGTATTGACAACCCAGTCATAAAAAATCCTGTGACTAATGAGCCTT
ACATTCCAGGCAGTTCCTTTCGCGGAAGAATGCGCTCTCTTCTGGAGAAAAAAACAGCAGAGTATCTCTCGCCAATGACT
GGTAATAAGGAAATTTGGATGGAGATTTATAAGGCTGAAGATGAAAAGTATAATAACAATAAGGCGCAATCCACAATTGA
TGCAATGAATTCCGAGGTATGTCGTGTTTTTGGTAATTCTGCTTCATATGAGAGTGTGCCTTCAGTACTGATTGTGCGGG
ATGCCCTCTATACAGAAAAAACACGCGAATCATATATGCAGGGAGGAAAAGGCGGCTTGCCCATTACTGAGGCAAAAATG
GAAATTGCAGTTGACCGAATCACAGCCCACGCACTTCCCCGCACTATTGAACGAGTGCCAGCTGGCGCTAAGTTTGCATT
TGAAATTGTTTATAAAATTCAATCGACATCATTTATTTGTGTCATTGACGAAAAGGGTAAACCAAAAGAAGTAAAATCTT
ATATGGCCGATGATAAAGTGATTGAAAAAGATATTGAAAATATTTTGTGGGCTTTAAAACAAATCGAAGAACATGATGGA
CTAGGAGGGAACACTTCTCGCGGTCATGGTCAGGTTAAGTTTTCTATTGACCCTATTAAATATGAGGTATTTGAAGATGT
GTCTAAGCAGAAAATAGAAAAAGCCATAAAAAATATTAAAACAACGAAAGAGGCATAA

Upstream 100 bases:

>100_bases
AGTCAAAGACCTTCGGCTTTTCATGGAGTTTTTCGAAGCAATCTTGGATTACCATTCTACATTTAAAACTCAAAAAAAAG
ATAATTAAGGAGTGCTTCAA

Downstream 100 bases:

>100_bases
CCAGTGTGATATGAATACATATATCGTACATCTCTACTTTAAAAATGCCTTGCATGTTGGTGCTGCAAATTCCGGAATAG
GTATTGAGGCAACTCAGGAT

Product: CRISPR-associated RAMP Csm3 family protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 285; Mature: 284

Protein sequence:

>285_residues
MADIERQIKLLGYIKITGIIEALTGLHIGGTADSIDKGGIDNPVIKNPVTNEPYIPGSSFRGRMRSLLEKKTAEYLSPMT
GNKEIWMEIYKAEDEKYNNNKAQSTIDAMNSEVCRVFGNSASYESVPSVLIVRDALYTEKTRESYMQGGKGGLPITEAKM
EIAVDRITAHALPRTIERVPAGAKFAFEIVYKIQSTSFICVIDEKGKPKEVKSYMADDKVIEKDIENILWALKQIEEHDG
LGGNTSRGHGQVKFSIDPIKYEVFEDVSKQKIEKAIKNIKTTKEA

Sequences:

>Translated_285_residues
MADIERQIKLLGYIKITGIIEALTGLHIGGTADSIDKGGIDNPVIKNPVTNEPYIPGSSFRGRMRSLLEKKTAEYLSPMT
GNKEIWMEIYKAEDEKYNNNKAQSTIDAMNSEVCRVFGNSASYESVPSVLIVRDALYTEKTRESYMQGGKGGLPITEAKM
EIAVDRITAHALPRTIERVPAGAKFAFEIVYKIQSTSFICVIDEKGKPKEVKSYMADDKVIEKDIENILWALKQIEEHDG
LGGNTSRGHGQVKFSIDPIKYEVFEDVSKQKIEKAIKNIKTTKEA
>Mature_284_residues
ADIERQIKLLGYIKITGIIEALTGLHIGGTADSIDKGGIDNPVIKNPVTNEPYIPGSSFRGRMRSLLEKKTAEYLSPMTG
NKEIWMEIYKAEDEKYNNNKAQSTIDAMNSEVCRVFGNSASYESVPSVLIVRDALYTEKTRESYMQGGKGGLPITEAKME
IAVDRITAHALPRTIERVPAGAKFAFEIVYKIQSTSFICVIDEKGKPKEVKSYMADDKVIEKDIENILWALKQIEEHDGL
GGNTSRGHGQVKFSIDPIKYEVFEDVSKQKIEKAIKNIKTTKEA

Specific function: Unknown

COG id: COG1337

COG function: function code L; Uncharacterized protein predicted to be involved in DNA repair (RAMP superfamily)

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: To M.jannaschii MJ1669 [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013412
- InterPro:   IPR005537 [H]

Pfam domain/function: PF03787 RAMPs [H]

EC number: NA

Molecular weight: Translated: 31784; Mature: 31653

Theoretical pI: Translated: 6.95; Mature: 6.95

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MADIERQIKLLGYIKITGIIEALTGLHIGGTADSIDKGGIDNPVIKNPVTNEPYIPGSSF
CCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHH
RGRMRSLLEKKTAEYLSPMTGNKEIWMEIYKAEDEKYNNNKAQSTIDAMNSEVCRVFGNS
HHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCHHCCCCHHHHHHHHHHHHHHHHHCCC
ASYESVPSVLIVRDALYTEKTRESYMQGGKGGLPITEAKMEIAVDRITAHALPRTIERVP
CCHHHCCCCEEHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCC
AGAKFAFEIVYKIQSTSFICVIDEKGKPKEVKSYMADDKVIEKDIENILWALKQIEEHDG
CCCHHHHHHHEEECCCEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
LGGNTSRGHGQVKFSIDPIKYEVFEDVSKQKIEKAIKNIKTTKEA
CCCCCCCCCCEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure 
ADIERQIKLLGYIKITGIIEALTGLHIGGTADSIDKGGIDNPVIKNPVTNEPYIPGSSF
CCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHH
RGRMRSLLEKKTAEYLSPMTGNKEIWMEIYKAEDEKYNNNKAQSTIDAMNSEVCRVFGNS
HHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCHHCCCCHHHHHHHHHHHHHHHHHCCC
ASYESVPSVLIVRDALYTEKTRESYMQGGKGGLPITEAKMEIAVDRITAHALPRTIERVP
CCHHHCCCCEEHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCC
AGAKFAFEIVYKIQSTSFICVIDEKGKPKEVKSYMADDKVIEKDIENILWALKQIEEHDG
CCCHHHHHHHEEECCCEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
LGGNTSRGHGQVKFSIDPIKYEVFEDVSKQKIEKAIKNIKTTKEA
CCCCCCCCCCEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9371463 [H]