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The map label for this gene is 119357839

Identifier: 119357839

GI number: 119357839

Start: 2369102

End: 2370166

Strand: Reverse

Name: 119357839

Synonym: Cpha266_2047

Alternate gene names: NA

Gene position: 2370166-2369102 (Counterclockwise)

Preceding gene: 119357840

Following gene: 119357838

Centisome position: 75.63

GC content: 40.47

Gene sequence:

>1065_bases
ATGAATACATATATCGTACATCTCTACTTTAAAAATGCCTTGCATGTTGGTGCTGCAAATTCCGGAATAGGTATTGAGGC
AACTCAGGATTTTATTCATTCAGATACGCTCTGGGCTGCCATTGCCAATCACTGGGCAATTTTGGGAAAAGTAGGCGATA
TTTCCTTTGATGATTTTCTGAACGGCTTTCGCACGAAACACGATGATGGAATTCGCCACAAAGAGGAACCGTTGTTTCGA
ATATCATCGGCTTTTCCACTAACAGATAATGGGCGTATGTATTGGCTACCAAAGCCATTATCTGTACCCATGGCATTTTC
AAAACGCAATATAGAAGACCGAGAAAATCAACGCAAAGAGTACGGAAAAAAAGTAAAGCAGGAAAAGTTTATTCCACTGA
AAGTGTTCAAAGAATGGATGAATTTTGAAAAAAATGCAAGTGATGTTGGAGGAGCAAAAAGAGAAGGAATTTCCAGTGGT
CAAATGCGCCCTCATGCTACCATTGATAGAATATCAATGCGAGCACAACTTTTCCATTCCGGGATAACCTATTTCGACAA
GTTTGCTGTGCGGGTTGGTCTTTATTTTCTTATTCAATGTGGTAAGACAACCAAAACTGCCCTTGAGAAAGTTTTTGAAG
TGATCTATGAAGCTGGAGCTATTGGGGGAAACCGGAACATTGGTCTCGGCAGTCTTTTTGAAAAACCATCCTTAACAGAG
GCGAGCGAATTTGCAGACCTCTTTAATACAGAAAATACCAATGCGTATTGTTTGCTTTCTCTATGCTACCTTTCCGATGG
TGAAATACCAAATGCAGAAACAGCAGTCGCATACAATCATCTATTACGTAAAGGTTGGACGGGATCACTCTCAGTCAGCT
TACAGCGCAAACGTAAAACTGTTTATATGTTCGCCGAAGGAAGCGTTTTTCAAACAAAATTAAATGGCTGTTTGGCGGAC
ATTACTCCAGACAAAATCATAACTCCTGAATGGTACGGGCATCACGATGTTTATCGTTACGGTTATGCTCTTAGTGTGCC
GATAAAAATCGACTTAGATGACTGA

Upstream 100 bases:

>100_bases
GACCCTATTAAATATGAGGTATTTGAAGATGTGTCTAAGCAGAAAATAGAAAAAGCCATAAAAAATATTAAAACAACGAA
AGAGGCATAACCAGTGTGAT

Downstream 100 bases:

>100_bases
GCATATGGAAAGTAAAATCATCGAGCTGGAAACCCTTACCTCTCTATTTATTAAGGGTAAAGAAGAAAATTATGGCGAAG
GATTTATCAGGATCGGGAAT

Product: CRISPR-associated RAMP Csm4 family protein

Products: NA

Alternate protein names: CRISPR-Associated RAMP Protein Csm4 Family; CRISPR-Associated Protein; Csm4 Family CRISPR-Associated RAMP Protein; Crispr-Associated Ramp Protein Csm4 Family

Number of amino acids: Translated: 354; Mature: 354

Protein sequence:

>354_residues
MNTYIVHLYFKNALHVGAANSGIGIEATQDFIHSDTLWAAIANHWAILGKVGDISFDDFLNGFRTKHDDGIRHKEEPLFR
ISSAFPLTDNGRMYWLPKPLSVPMAFSKRNIEDRENQRKEYGKKVKQEKFIPLKVFKEWMNFEKNASDVGGAKREGISSG
QMRPHATIDRISMRAQLFHSGITYFDKFAVRVGLYFLIQCGKTTKTALEKVFEVIYEAGAIGGNRNIGLGSLFEKPSLTE
ASEFADLFNTENTNAYCLLSLCYLSDGEIPNAETAVAYNHLLRKGWTGSLSVSLQRKRKTVYMFAEGSVFQTKLNGCLAD
ITPDKIITPEWYGHHDVYRYGYALSVPIKIDLDD

Sequences:

>Translated_354_residues
MNTYIVHLYFKNALHVGAANSGIGIEATQDFIHSDTLWAAIANHWAILGKVGDISFDDFLNGFRTKHDDGIRHKEEPLFR
ISSAFPLTDNGRMYWLPKPLSVPMAFSKRNIEDRENQRKEYGKKVKQEKFIPLKVFKEWMNFEKNASDVGGAKREGISSG
QMRPHATIDRISMRAQLFHSGITYFDKFAVRVGLYFLIQCGKTTKTALEKVFEVIYEAGAIGGNRNIGLGSLFEKPSLTE
ASEFADLFNTENTNAYCLLSLCYLSDGEIPNAETAVAYNHLLRKGWTGSLSVSLQRKRKTVYMFAEGSVFQTKLNGCLAD
ITPDKIITPEWYGHHDVYRYGYALSVPIKIDLDD
>Mature_354_residues
MNTYIVHLYFKNALHVGAANSGIGIEATQDFIHSDTLWAAIANHWAILGKVGDISFDDFLNGFRTKHDDGIRHKEEPLFR
ISSAFPLTDNGRMYWLPKPLSVPMAFSKRNIEDRENQRKEYGKKVKQEKFIPLKVFKEWMNFEKNASDVGGAKREGISSG
QMRPHATIDRISMRAQLFHSGITYFDKFAVRVGLYFLIQCGKTTKTALEKVFEVIYEAGAIGGNRNIGLGSLFEKPSLTE
ASEFADLFNTENTNAYCLLSLCYLSDGEIPNAETAVAYNHLLRKGWTGSLSVSLQRKRKTVYMFAEGSVFQTKLNGCLAD
ITPDKIITPEWYGHHDVYRYGYALSVPIKIDLDD

Specific function: Unknown

COG id: COG1567

COG function: function code L; Uncharacterized protein predicted to be involved in DNA repair (RAMP superfamily)

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 40021; Mature: 40021

Theoretical pI: Translated: 8.29; Mature: 8.29

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNTYIVHLYFKNALHVGAANSGIGIEATQDFIHSDTLWAAIANHWAILGKVGDISFDDFL
CCEEEEEEEEECEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHEEEEECCCCCHHHHH
NGFRTKHDDGIRHKEEPLFRISSAFPLTDNGRMYWLPKPLSVPMAFSKRNIEDRENQRKE
HHHCCCCCCCCCCCCCCCEEECCCCCCCCCCEEEEECCCCCCCCHHCCCCCHHHHHHHHH
YGKKVKQEKFIPLKVFKEWMNFEKNASDVGGAKREGISSGQMRPHATIDRISMRAQLFHS
HHHHHHHCCCCHHHHHHHHHCCCCCCHHCCCCHHCCCCCCCCCCCCHHHHHHHHHHHHHH
GITYFDKFAVRVGLYFLIQCGKTTKTALEKVFEVIYEAGAIGGNRNIGLGSLFEKPSLTE
HHHHHHHHHHHHHHHHEEECCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHCCCCCCCC
ASEFADLFNTENTNAYCLLSLCYLSDGEIPNAETAVAYNHLLRKGWTGSLSVSLQRKRKT
HHHHHHHHCCCCCCEEEEEEEEECCCCCCCCCHHHHHHHHHHHCCCCCCEEEEEEECCCE
VYMFAEGSVFQTKLNGCLADITPDKIITPEWYGHHDVYRYGYALSVPIKIDLDD
EEEEECCCEEEHHHCCEEECCCCCCEECCCCCCCCCHHHCCEEEEEEEEEEECC
>Mature Secondary Structure
MNTYIVHLYFKNALHVGAANSGIGIEATQDFIHSDTLWAAIANHWAILGKVGDISFDDFL
CCEEEEEEEEECEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHEEEEECCCCCHHHHH
NGFRTKHDDGIRHKEEPLFRISSAFPLTDNGRMYWLPKPLSVPMAFSKRNIEDRENQRKE
HHHCCCCCCCCCCCCCCCEEECCCCCCCCCCEEEEECCCCCCCCHHCCCCCHHHHHHHHH
YGKKVKQEKFIPLKVFKEWMNFEKNASDVGGAKREGISSGQMRPHATIDRISMRAQLFHS
HHHHHHHCCCCHHHHHHHHHCCCCCCHHCCCCHHCCCCCCCCCCCCHHHHHHHHHHHHHH
GITYFDKFAVRVGLYFLIQCGKTTKTALEKVFEVIYEAGAIGGNRNIGLGSLFEKPSLTE
HHHHHHHHHHHHHHHHEEECCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHCCCCCCCC
ASEFADLFNTENTNAYCLLSLCYLSDGEIPNAETAVAYNHLLRKGWTGSLSVSLQRKRKT
HHHHHHHHCCCCCCEEEEEEEEECCCCCCCCCHHHHHHHHHHHCCCCCCEEEEEEECCCE
VYMFAEGSVFQTKLNGCLADITPDKIITPEWYGHHDVYRYGYALSVPIKIDLDD
EEEEECCCEEEHHHCCEEECCCCCCEECCCCCCCCCHHHCCEEEEEEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA