Definition Chlorobium phaeobacteroides DSM 266 chromosome, complete genome.
Accession NC_008639
Length 3,133,902

Click here to switch to the map view.

The map label for this gene is 119357749

Identifier: 119357749

GI number: 119357749

Start: 2267241

End: 2267534

Strand: Reverse

Name: 119357749

Synonym: Cpha266_1955

Alternate gene names: NA

Gene position: 2267534-2267241 (Counterclockwise)

Preceding gene: 119357750

Following gene: 119357748

Centisome position: 72.35

GC content: 50.0

Gene sequence:

>294_bases
ATGAGCGAAAAGCAACGCAAAAGTTTTACGGCACAATTCAAGGCCAAAGTGGCGCTTGAGGCAATCAGGGGCGAAAAAAC
CCTAAACGAAATCGGTCGGGAATTTGGTATCCACCCGAATCTGGTTGGGCAATGGAAGCGTGAGGTTCAAGAGCATGCGG
ACGGTCTCTTTGAGGCCAAGCGCGGCCCGAAGCCGGTCGATCCACTTGCAGATCCGGAAAAGCTTTATGCTGAAATAGGT
CGGCTCAAAGTTGAGTTGAGTTGGCTCAAAAAAAAAGTCGATCCGTACCTATGA

Upstream 100 bases:

>100_bases
CAACTGCCGGTTTTTGGATTAAGATCGAATTGGGATGTAGTGGCCCCCGATTTTCAGACAAGTGTTTAAGGTGGTAACTT
GCCCAAAAAAGGGACAAGTT

Downstream 100 bases:

>100_bases
AAGCGCGTAAAAGCTGGATCAGCGACAAGGGACCGTTGTCGGTATCGACCCAATGTGAACTTGCCGGAGTAACCCGGTCA
GGGTACTACGGGCAAAGCAA

Product: transposase IS3/IS911 family protein

Products: NA

Alternate protein names: Transposase IS3/IS; Transposase IS3/; Transposase IS3 Family

Number of amino acids: Translated: 97; Mature: 96

Protein sequence:

>97_residues
MSEKQRKSFTAQFKAKVALEAIRGEKTLNEIGREFGIHPNLVGQWKREVQEHADGLFEAKRGPKPVDPLADPEKLYAEIG
RLKVELSWLKKKVDPYL

Sequences:

>Translated_97_residues
MSEKQRKSFTAQFKAKVALEAIRGEKTLNEIGREFGIHPNLVGQWKREVQEHADGLFEAKRGPKPVDPLADPEKLYAEIG
RLKVELSWLKKKVDPYL
>Mature_96_residues
SEKQRKSFTAQFKAKVALEAIRGEKTLNEIGREFGIHPNLVGQWKREVQEHADGLFEAKRGPKPVDPLADPEKLYAEIGR
LKVELSWLKKKVDPYL

Specific function: Unknown

COG id: COG2963

COG function: function code L; Transposase and inactivated derivatives

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 11129; Mature: 10998

Theoretical pI: Translated: 10.07; Mature: 10.07

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.0 %Met     (Translated Protein)
1.0 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
0.0 %Met     (Mature Protein)
0.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSEKQRKSFTAQFKAKVALEAIRGEKTLNEIGREFGIHPNLVGQWKREVQEHADGLFEAK
CCCHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHC
RGPKPVDPLADPEKLYAEIGRLKVELSWLKKKVDPYL
CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCC
>Mature Secondary Structure 
SEKQRKSFTAQFKAKVALEAIRGEKTLNEIGREFGIHPNLVGQWKREVQEHADGLFEAK
CCHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHC
RGPKPVDPLADPEKLYAEIGRLKVELSWLKKKVDPYL
CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA