| Definition | Chlorobium phaeobacteroides DSM 266 chromosome, complete genome. |
|---|---|
| Accession | NC_008639 |
| Length | 3,133,902 |
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The map label for this gene is acoC [H]
Identifier: 119357737
GI number: 119357737
Start: 2249262
End: 2250137
Strand: Direct
Name: acoC [H]
Synonym: Cpha266_1941
Alternate gene names: 119357737
Gene position: 2249262-2250137 (Clockwise)
Preceding gene: 119357734
Following gene: 119357739
Centisome position: 71.77
GC content: 48.86
Gene sequence:
>876_bases ATGATGACATCCTCCATCCGCGACAACTATTTTTTATGGCAGCTCTCGCCAGAACATGAAGCCAAAATCCGATATCAGGA ATTCGGCTGTGAAGAGAGCCAGAAAACACCGCTCCTTTTCATCCATGGTTACGGGGGGATGATCGAACATTGGGATAAAA ATATCCCGGATTTCATCAACACGCATAAAATTTACGCAATAGACCTCATTGGATTCGGCAAGTCACAAAAACCCAACGTC CGATACAGCCTGGAACTTTTTGCCGCTCAGATTGAAGCCTTTCTCTACCTGAAAAAACTTGAAAAAGTTATCATAGTCGG TCACTCGATGGGAGCTGCAAGCGCACTCTATTATGCTCATCTCAGGCCGAAAAAGGTTCAGGCACTGGTGCTCGCAAACC CTTCGGGGCTCTATGCGGGAAGCATGGACGGCGTAACAAAGATTTTTTTCGGGCTTGTCGGATCGCCTCTGATCGGCGAA GTACTGTTCGGTGCTTTTGCAAATCCGGTAGGCGTCAGCCAAAGCCTTTTGCCGACCTACTACAATCAAAGCATGGTCGA CATGAACCTTATCAACCAGTTTACTCGGCCTCTTCAGGACAAGGGTGCAATCTGGTCATATCTCTCACCATCACGCAGAC CTCAGGATTTCACGCTTGACCACCTTGAGAAACCCTGCCGCTTCAAAGGCAAGGCTTTTCTTGTATGGGGGGCCGAAGAC AGCGCTCTTCCTCCGCATAAAATCATACCGGAATTTCAGCAACTCCTGCCGCAGGCCGGAGCGTTTATCATACCTCAGGC ATCTCACTGCATTCACCACGATGCCTACAAAGCATTTAACGAACGACTGCTCCGGATTCTTGAGACGCTTGTCTGA
Upstream 100 bases:
>100_bases TGAAAACCCGCTTTCTATGTTTACTATTAATCCGGATGTGTTATAATAAGTTTGCTGGGAACGTTTTTTGCTGTTTCATC TGTGCACTTTACTGTTTTTC
Downstream 100 bases:
>100_bases CAACATCCCGGTCAATTGGTCCAACTGCTGCTTGATCCACTGGTTTTGAACCGGATATCCTGCAACAGGGAAGCTTTCAG ACCAATCTGAAAGGAATAGC
Product: alpha/beta hydrolase fold
Products: NA
Alternate protein names: Acetoin dehydrogenase E2 component; Dihydrolipoamide acetyltransferase component of acetoin cleaving system [H]
Number of amino acids: Translated: 291; Mature: 291
Protein sequence:
>291_residues MMTSSIRDNYFLWQLSPEHEAKIRYQEFGCEESQKTPLLFIHGYGGMIEHWDKNIPDFINTHKIYAIDLIGFGKSQKPNV RYSLELFAAQIEAFLYLKKLEKVIIVGHSMGAASALYYAHLRPKKVQALVLANPSGLYAGSMDGVTKIFFGLVGSPLIGE VLFGAFANPVGVSQSLLPTYYNQSMVDMNLINQFTRPLQDKGAIWSYLSPSRRPQDFTLDHLEKPCRFKGKAFLVWGAED SALPPHKIIPEFQQLLPQAGAFIIPQASHCIHHDAYKAFNERLLRILETLV
Sequences:
>Translated_291_residues MMTSSIRDNYFLWQLSPEHEAKIRYQEFGCEESQKTPLLFIHGYGGMIEHWDKNIPDFINTHKIYAIDLIGFGKSQKPNV RYSLELFAAQIEAFLYLKKLEKVIIVGHSMGAASALYYAHLRPKKVQALVLANPSGLYAGSMDGVTKIFFGLVGSPLIGE VLFGAFANPVGVSQSLLPTYYNQSMVDMNLINQFTRPLQDKGAIWSYLSPSRRPQDFTLDHLEKPCRFKGKAFLVWGAED SALPPHKIIPEFQQLLPQAGAFIIPQASHCIHHDAYKAFNERLLRILETLV >Mature_291_residues MMTSSIRDNYFLWQLSPEHEAKIRYQEFGCEESQKTPLLFIHGYGGMIEHWDKNIPDFINTHKIYAIDLIGFGKSQKPNV RYSLELFAAQIEAFLYLKKLEKVIIVGHSMGAASALYYAHLRPKKVQALVLANPSGLYAGSMDGVTKIFFGLVGSPLIGE VLFGAFANPVGVSQSLLPTYYNQSMVDMNLINQFTRPLQDKGAIWSYLSPSRRPQDFTLDHLEKPCRFKGKAFLVWGAED SALPPHKIIPEFQQLLPQAGAFIIPQASHCIHHDAYKAFNERLLRILETLV
Specific function: Unknown
COG id: COG0596
COG function: function code R; Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily)
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Contains 1 lipoyl-binding domain [H]
Homologues:
Organism=Homo sapiens, GI50658087, Length=123, Percent_Identity=28.4552845528455, Blast_Score=69, Evalue=5e-12, Organism=Caenorhabditis elegans, GI32566936, Length=130, Percent_Identity=33.0769230769231, Blast_Score=69, Evalue=2e-12, Organism=Caenorhabditis elegans, GI17558492, Length=130, Percent_Identity=33.0769230769231, Blast_Score=69, Evalue=2e-12, Organism=Caenorhabditis elegans, GI25146278, Length=114, Percent_Identity=34.2105263157895, Blast_Score=67, Evalue=9e-12, Organism=Drosophila melanogaster, GI24586385, Length=110, Percent_Identity=33.6363636363636, Blast_Score=74, Evalue=2e-13, Organism=Drosophila melanogaster, GI24586387, Length=110, Percent_Identity=33.6363636363636, Blast_Score=73, Evalue=2e-13, Organism=Drosophila melanogaster, GI24586391, Length=110, Percent_Identity=33.6363636363636, Blast_Score=73, Evalue=2e-13, Organism=Drosophila melanogaster, GI24586389, Length=110, Percent_Identity=33.6363636363636, Blast_Score=73, Evalue=2e-13,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003016 - InterPro: IPR000073 - InterPro: IPR000089 - InterPro: IPR011053 [H]
Pfam domain/function: PF00561 Abhydrolase_1; PF00364 Biotin_lipoyl [H]
EC number: =2.3.1.12 [H]
Molecular weight: Translated: 32905; Mature: 32905
Theoretical pI: Translated: 8.43; Mature: 8.43
Prosite motif: PS00120 LIPASE_SER
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MMTSSIRDNYFLWQLSPEHEAKIRYQEFGCEESQKTPLLFIHGYGGMIEHWDKNIPDFIN CCCCCCCCCEEEEEECCCCCCEEEHHHCCCCCCCCCCEEEEECCCCHHHHHCCCCCHHHC THKIYAIDLIGFGKSQKPNVRYSLELFAAQIEAFLYLKKLEKVIIVGHSMGAASALYYAH CCEEEEEEEEECCCCCCCCCEEHHHHHHHHHHHHHHHHHHCEEEEEECCCCHHHHHHHHH LRPKKVQALVLANPSGLYAGSMDGVTKIFFGLVGSPLIGEVLFGAFANPVGVSQSLLPTY CCCCCEEEEEEECCCCCCCCCCCHHHHHHHHHHCCHHHHHHHHHHHCCCCCCCHHHHHHH YNQSMVDMNLINQFTRPLQDKGAIWSYLSPSRRPQDFTLDHLEKPCRFKGKAFLVWGAED HCCHHHHHHHHHHHHHCHHHCCCEEHHCCCCCCCCCCCHHHHCCCCCCCCCEEEEECCCC SALPPHKIIPEFQQLLPQAGAFIIPQASHCIHHDAYKAFNERLLRILETLV CCCCCHHHHHHHHHHHHHCCCEEECCCHHHHHHHHHHHHHHHHHHHHHHHC >Mature Secondary Structure MMTSSIRDNYFLWQLSPEHEAKIRYQEFGCEESQKTPLLFIHGYGGMIEHWDKNIPDFIN CCCCCCCCCEEEEEECCCCCCEEEHHHCCCCCCCCCCEEEEECCCCHHHHHCCCCCHHHC THKIYAIDLIGFGKSQKPNVRYSLELFAAQIEAFLYLKKLEKVIIVGHSMGAASALYYAH CCEEEEEEEEECCCCCCCCCEEHHHHHHHHHHHHHHHHHHCEEEEEECCCCHHHHHHHHH LRPKKVQALVLANPSGLYAGSMDGVTKIFFGLVGSPLIGEVLFGAFANPVGVSQSLLPTY CCCCCEEEEEEECCCCCCCCCCCHHHHHHHHHHCCHHHHHHHHHHHCCCCCCCHHHHHHH YNQSMVDMNLINQFTRPLQDKGAIWSYLSPSRRPQDFTLDHLEKPCRFKGKAFLVWGAED HCCHHHHHHHHHHHHHCHHHCCCEEHHCCCCCCCCCCCHHHHCCCCCCCCCEEEEECCCC SALPPHKIIPEFQQLLPQAGAFIIPQASHCIHHDAYKAFNERLLRILETLV CCCCCHHHHHHHHHHHHHCCCEEECCCHHHHHHHHHHHHHHHHHHHHHHHC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 7813883 [H]