| Definition | Chlorobium phaeobacteroides DSM 266 chromosome, complete genome. |
|---|---|
| Accession | NC_008639 |
| Length | 3,133,902 |
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The map label for this gene is 119357681
Identifier: 119357681
GI number: 119357681
Start: 2181267
End: 2182646
Strand: Direct
Name: 119357681
Synonym: Cpha266_1885
Alternate gene names: NA
Gene position: 2181267-2182646 (Clockwise)
Preceding gene: 119357679
Following gene: 119357682
Centisome position: 69.6
GC content: 51.96
Gene sequence:
>1380_bases ATGGGTTTATCCGGATTAAAGGGCGTAGCCCTTCTTGCTGCGCTGCTCTCTGCTTCGTATTCAAATCAACTGCCGCTTTT TGCCGCCGAAACCTCTTATGCACCGGAGATACTCCAGTACGTCAGTGAAGATAAAGCTTATTTGTTAGAAACTCTCCGTC AAAAAGTCACCAAGCCATCTGAAAAAATTATTCTCGACGCTCTTCTGACAGAAGATGGCGCACAAGCAGCATTACTCTAC CAGAAACAGCTTCGGGAGTATCCCGACCCTTCGTTCGACGCACTGAGCAGTTCGAGAGTGGCAGCTTACCAGTCGGCACT GAACCAGCCCATTACGCTTTCGCCACTGGCACGCAACACTTCGAAACCGGCTGCCCCCCCAGGCTCGCTTAAACCCGGAA TAAAAAAAGAGACGAAAACCACTGTCGCTTCGGTTGCCACCCCTCTCGCATCAACACTCGCCGCAAACAGATCGGGAGAG ACCAAATCCATATCCCCTCCCCCGGCAGTACCGCCAGAGCTTCAAACCAAAACCGTTATGCCTGCGGATCTTGCCGCAAA TAATAAAACGGCGGCACAAGCAACAGTCGGCAATGCCGATAAACCAGGCGGGTCAACGCTTGCCGCAAACCAGTTGGAAC TGAACCGGCAGATCAAACTGCCGCCATTGGTACGCGACATTTCGCAAGAGCCGTCAGGTACCGGAACCCCGAAATCGGGT AAAAAAACCAGCCTGAAAACCCCTTCTGCTACACCCGGCAAGTTTGCCGGTTCGGCGTCTTCCGCAAATCAGTCGGCTCT GAACATGTTGGGCACGCTTCCTCCGGCAACGCCTGTTGTGCCGTCGGGTGCCACGCCTGCAGTTAAGCCGGCGAGTTCAA AACTTGCACCCAACCAGTTAGCTCTGAACCGTCAGATCAAACTCCCCCGGTTAGAACGCGACTTTCCGCTGCAGCCAGGC CCTTCCTTAACACTCAAATCAAACGACAAAGCAGCGATAAAAACAAGTGTCGTTCCTGTCGAACAGGGTAAACCGGACAG CTCTAAACCCGCAACCGCTGTTCCCCCTGCTACGCCTGCAGCTCCATCCGACACAAGCCGGAAAGCCGCAACAAAAGAGA ACAAGAAACCCGACACCGCTTCTGCCCTTAACCCCGCAACGTCAAATTCGGGCTTGTATACCTTGCAATTCGGATATTTC AAAACAAGAAAAAATGCAGAACTTCTCCTTGAAAAGATCTCCCCAAACTATCCTGCCATTATTGCTGATCATGGAGAGGC ACATGCTGTCATGCTCAAAAAAACATATCCCTCAAAAAAAGAGGCCATTAGCGCCGCCACGACTATTCCATTCACGAGCA TCGTTGTTCCTGTGAACTGA
Upstream 100 bases:
>100_bases ATTGATTTTATAGAAAAAAATTTGTCATATTATGTTATGATGAAGGAGCATAACAGATTGGTATAACAAAACGCTGTCGA ACCATACTCAAGCCGAACCG
Downstream 100 bases:
>100_bases TACATCTATTTCCGAACCCATGCAGCAGCAAACAACATGAAACGCAATAGCTCGTTTATTGGAAAATCACAACTGGTCAC CCAGCTCAGGGAACTCGCAC
Product: sporulation domain-containing protein
Products: NA
Alternate protein names: Sporulation Domain Protein
Number of amino acids: Translated: 459; Mature: 458
Protein sequence:
>459_residues MGLSGLKGVALLAALLSASYSNQLPLFAAETSYAPEILQYVSEDKAYLLETLRQKVTKPSEKIILDALLTEDGAQAALLY QKQLREYPDPSFDALSSSRVAAYQSALNQPITLSPLARNTSKPAAPPGSLKPGIKKETKTTVASVATPLASTLAANRSGE TKSISPPPAVPPELQTKTVMPADLAANNKTAAQATVGNADKPGGSTLAANQLELNRQIKLPPLVRDISQEPSGTGTPKSG KKTSLKTPSATPGKFAGSASSANQSALNMLGTLPPATPVVPSGATPAVKPASSKLAPNQLALNRQIKLPRLERDFPLQPG PSLTLKSNDKAAIKTSVVPVEQGKPDSSKPATAVPPATPAAPSDTSRKAATKENKKPDTASALNPATSNSGLYTLQFGYF KTRKNAELLLEKISPNYPAIIADHGEAHAVMLKKTYPSKKEAISAATTIPFTSIVVPVN
Sequences:
>Translated_459_residues MGLSGLKGVALLAALLSASYSNQLPLFAAETSYAPEILQYVSEDKAYLLETLRQKVTKPSEKIILDALLTEDGAQAALLY QKQLREYPDPSFDALSSSRVAAYQSALNQPITLSPLARNTSKPAAPPGSLKPGIKKETKTTVASVATPLASTLAANRSGE TKSISPPPAVPPELQTKTVMPADLAANNKTAAQATVGNADKPGGSTLAANQLELNRQIKLPPLVRDISQEPSGTGTPKSG KKTSLKTPSATPGKFAGSASSANQSALNMLGTLPPATPVVPSGATPAVKPASSKLAPNQLALNRQIKLPRLERDFPLQPG PSLTLKSNDKAAIKTSVVPVEQGKPDSSKPATAVPPATPAAPSDTSRKAATKENKKPDTASALNPATSNSGLYTLQFGYF KTRKNAELLLEKISPNYPAIIADHGEAHAVMLKKTYPSKKEAISAATTIPFTSIVVPVN >Mature_458_residues GLSGLKGVALLAALLSASYSNQLPLFAAETSYAPEILQYVSEDKAYLLETLRQKVTKPSEKIILDALLTEDGAQAALLYQ KQLREYPDPSFDALSSSRVAAYQSALNQPITLSPLARNTSKPAAPPGSLKPGIKKETKTTVASVATPLASTLAANRSGET KSISPPPAVPPELQTKTVMPADLAANNKTAAQATVGNADKPGGSTLAANQLELNRQIKLPPLVRDISQEPSGTGTPKSGK KTSLKTPSATPGKFAGSASSANQSALNMLGTLPPATPVVPSGATPAVKPASSKLAPNQLALNRQIKLPRLERDFPLQPGP SLTLKSNDKAAIKTSVVPVEQGKPDSSKPATAVPPATPAAPSDTSRKAATKENKKPDTASALNPATSNSGLYTLQFGYFK TRKNAELLLEKISPNYPAIIADHGEAHAVMLKKTYPSKKEAISAATTIPFTSIVVPVN
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 47855; Mature: 47724
Theoretical pI: Translated: 10.37; Mature: 10.37
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 0.9 %Met (Translated Protein) 0.9 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.7 %Met (Mature Protein) 0.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGLSGLKGVALLAALLSASYSNQLPLFAAETSYAPEILQYVSEDKAYLLETLRQKVTKPS CCCCCHHHHHHHHHHHHHCCCCCCCEEEECCCCHHHHHHHHCCCHHHHHHHHHHHHCCCH EKIILDALLTEDGAQAALLYQKQLREYPDPSFDALSSSRVAAYQSALNQPITLSPLARNT HHHHHHHHHCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCEEECHHHCCC SKPAAPPGSLKPGIKKETKTTVASVATPLASTLAANRSGETKSISPPPAVPPELQTKTVM CCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCC PADLAANNKTAAQATVGNADKPGGSTLAANQLELNRQIKLPPLVRDISQEPSGTGTPKSG CHHHCCCCCCHHHEECCCCCCCCCCCEECHHHHCCCCCCCCHHHHHHHCCCCCCCCCCCC KKTSLKTPSATPGKFAGSASSANQSALNMLGTLPPATPVVPSGATPAVKPASSKLAPNQL CCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCHH ALNRQIKLPRLERDFPLQPGPSLTLKSNDKAAIKTSVVPVEQGKPDSSKPATAVPPATPA HHCCEECCCCCCCCCCCCCCCCEEEECCCCCEEEEEEEECCCCCCCCCCCCCCCCCCCCC APSDTSRKAATKENKKPDTASALNPATSNSGLYTLQFGYFKTRKNAELLLEKISPNYPAI CCCCCCHHHHHHCCCCCCCHHHCCCCCCCCCEEEEEECEEECCCCHHHHHHHHCCCCCEE IADHGEAHAVMLKKTYPSKKEAISAATTIPFTSIVVPVN EECCCCEEEEEEECCCCCHHHHHHHHHCCCEEEEEEECC >Mature Secondary Structure GLSGLKGVALLAALLSASYSNQLPLFAAETSYAPEILQYVSEDKAYLLETLRQKVTKPS CCCCHHHHHHHHHHHHHCCCCCCCEEEECCCCHHHHHHHHCCCHHHHHHHHHHHHCCCH EKIILDALLTEDGAQAALLYQKQLREYPDPSFDALSSSRVAAYQSALNQPITLSPLARNT HHHHHHHHHCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCEEECHHHCCC SKPAAPPGSLKPGIKKETKTTVASVATPLASTLAANRSGETKSISPPPAVPPELQTKTVM CCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCC PADLAANNKTAAQATVGNADKPGGSTLAANQLELNRQIKLPPLVRDISQEPSGTGTPKSG CHHHCCCCCCHHHEECCCCCCCCCCCEECHHHHCCCCCCCCHHHHHHHCCCCCCCCCCCC KKTSLKTPSATPGKFAGSASSANQSALNMLGTLPPATPVVPSGATPAVKPASSKLAPNQL CCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCHH ALNRQIKLPRLERDFPLQPGPSLTLKSNDKAAIKTSVVPVEQGKPDSSKPATAVPPATPA HHCCEECCCCCCCCCCCCCCCCEEEECCCCCEEEEEEEECCCCCCCCCCCCCCCCCCCCC APSDTSRKAATKENKKPDTASALNPATSNSGLYTLQFGYFKTRKNAELLLEKISPNYPAI CCCCCCHHHHHHCCCCCCCHHHCCCCCCCCCEEEEEECEEECCCCHHHHHHHHCCCCCEE IADHGEAHAVMLKKTYPSKKEAISAATTIPFTSIVVPVN EECCCCEEEEEEECCCCCHHHHHHHHHCCCEEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA