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The map label for this gene is bepC [H]

Identifier: 119357641

GI number: 119357641

Start: 2124518

End: 2125933

Strand: Reverse

Name: bepC [H]

Synonym: Cpha266_1845

Alternate gene names: 119357641

Gene position: 2125933-2124518 (Counterclockwise)

Preceding gene: 119357642

Following gene: 119357640

Centisome position: 67.84

GC content: 50.85

Gene sequence:

>1416_bases
ATGAAGAATACAACCAAAAAAAACCTGAAAACCCTTGCAGCGGCAGTTTTGCTGCTCTGCCTCGGGGCACCTGAAACGGC
GAAGGCCGGGCCGGTAACCGTGCGAGAGGCGGTTGAAAAAGCGCTGAACACCAACCCTGAAATAAAAGCAAGGTTTCATG
CTTTTCGGGACGTGTATGAAGAGCAGGGCGTTGCAAACGGCGGGTACTGGCCGCGAATTGACGCTACGGCAGGCATAGGC
AGGGAGTGGCTTCGTGGTGAAAATGTTACCGACAAGGACTACTGGCGCAAGGGCGTTCGTCTGGAGCTTTCCCAGATGCT
GTTTGACGGATTTTATACCTGCAATCAGGTTTGCCGGTTAAAACACTCGGGTCAGGCACGCTATTTTGAGTTCATGGATA
CCATGGAGAGCGTTGGTCTTGAGAGTTACCGCTCTTATGCCGATGTGTTGCGGTATCGGGAGATGGTTCGTCTTGCCAAG
AGGAACTATGATTACCATCAGGAGATTTTCAATCAGGTCAGCAGTCGCGTTCGTGCCGGTGTAGGGGCCGGGGTTGACGT
GAGCCAGATTAGCGCCCGTGTTGCTCTTGCCCAGTCGAACTATTTGACTGAGTTAAGCAATCTGCACGATGTGACGGCAC
GTTTTCAGCGGATTATTGGCGAATTGCCTGAGGAAAATATGCAGGCAGCGCTGCTCCCTACTGACGGCATACCGGCAACA
GCCTCTGATGCTCTTAAAGATGCGTATCAGCATAACCCGGGATTTCTTGCCACGATGTCTGACATCAATGCAGCAAAACA
TGCGGTGAAGGTGCAGGAGTCCAAATTCTATCCAAGACTCGATTTCAAGGCTCGCCATGACTGGTCGTGGGATCTTGATG
GTATTGACGGAAGGCAGGATGAGAGCGTGGTTGAACTTGTCATGACCTACAATATTCTTAACGGTGGTTCTGATGCTGCC
GCTGTTCGTCAGTATCGCGAAAAAATGTACCGTTCGGTTGACATGAAAGACAAGGCAGCTACCGATCTGCGCCAGACCAT
GACCATTGCTTATAACGACAGGCAGATTATCGGTCAGCAGGTTCGTTATCTCGATGCCCATCGTAAAAACCTGGATCAGG
TTCGCGTTGCTTATCGTGAACAGTTCAACATAGGCAAACGAACCCTGCTTGATCTGCTCGATACCGAAAACGAGTACTAT
CAGGCACAGCGGGCTTACTATAACGGCTTTTTTGATTTGACGATAGCCAATGCGAGAGCGCTCGCCGGCATGGGCAAATT
GCTGACCACCATGAATGTCGTTCGTGGTGAGTTGCCGAGTCTCAAGGATATCAATATTCCTCTGCCAAGAGTAACCGATG
AGGATGTTCCGCCGGTTGAAATTCCCGTTCCGGTGACCATGGCGAAGAAGTTTTGA

Upstream 100 bases:

>100_bases
ACGATCAAGGTATATGTTCAAACAGCCATTAATGATACAATAGTGTAAAAGGAGCCGGCAGTATTAAAGGACGACTTATA
AAACCAATACATTCAAGGTC

Downstream 100 bases:

>100_bases
GTTCGAAGGGTTACCTGTTACGAGTTAAGGGATTCGGGAAGTGAGGGGTTCGGGATGCTTGTCATCCCGAACGAAGAGAG
GGATCCTTTTTCAGTGGCGA

Product: TolC family type I secretion outer membrane protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 471; Mature: 471

Protein sequence:

>471_residues
MKNTTKKNLKTLAAAVLLLCLGAPETAKAGPVTVREAVEKALNTNPEIKARFHAFRDVYEEQGVANGGYWPRIDATAGIG
REWLRGENVTDKDYWRKGVRLELSQMLFDGFYTCNQVCRLKHSGQARYFEFMDTMESVGLESYRSYADVLRYREMVRLAK
RNYDYHQEIFNQVSSRVRAGVGAGVDVSQISARVALAQSNYLTELSNLHDVTARFQRIIGELPEENMQAALLPTDGIPAT
ASDALKDAYQHNPGFLATMSDINAAKHAVKVQESKFYPRLDFKARHDWSWDLDGIDGRQDESVVELVMTYNILNGGSDAA
AVRQYREKMYRSVDMKDKAATDLRQTMTIAYNDRQIIGQQVRYLDAHRKNLDQVRVAYREQFNIGKRTLLDLLDTENEYY
QAQRAYYNGFFDLTIANARALAGMGKLLTTMNVVRGELPSLKDINIPLPRVTDEDVPPVEIPVPVTMAKKF

Sequences:

>Translated_471_residues
MKNTTKKNLKTLAAAVLLLCLGAPETAKAGPVTVREAVEKALNTNPEIKARFHAFRDVYEEQGVANGGYWPRIDATAGIG
REWLRGENVTDKDYWRKGVRLELSQMLFDGFYTCNQVCRLKHSGQARYFEFMDTMESVGLESYRSYADVLRYREMVRLAK
RNYDYHQEIFNQVSSRVRAGVGAGVDVSQISARVALAQSNYLTELSNLHDVTARFQRIIGELPEENMQAALLPTDGIPAT
ASDALKDAYQHNPGFLATMSDINAAKHAVKVQESKFYPRLDFKARHDWSWDLDGIDGRQDESVVELVMTYNILNGGSDAA
AVRQYREKMYRSVDMKDKAATDLRQTMTIAYNDRQIIGQQVRYLDAHRKNLDQVRVAYREQFNIGKRTLLDLLDTENEYY
QAQRAYYNGFFDLTIANARALAGMGKLLTTMNVVRGELPSLKDINIPLPRVTDEDVPPVEIPVPVTMAKKF
>Mature_471_residues
MKNTTKKNLKTLAAAVLLLCLGAPETAKAGPVTVREAVEKALNTNPEIKARFHAFRDVYEEQGVANGGYWPRIDATAGIG
REWLRGENVTDKDYWRKGVRLELSQMLFDGFYTCNQVCRLKHSGQARYFEFMDTMESVGLESYRSYADVLRYREMVRLAK
RNYDYHQEIFNQVSSRVRAGVGAGVDVSQISARVALAQSNYLTELSNLHDVTARFQRIIGELPEENMQAALLPTDGIPAT
ASDALKDAYQHNPGFLATMSDINAAKHAVKVQESKFYPRLDFKARHDWSWDLDGIDGRQDESVVELVMTYNILNGGSDAA
AVRQYREKMYRSVDMKDKAATDLRQTMTIAYNDRQIIGQQVRYLDAHRKNLDQVRVAYREQFNIGKRTLLDLLDTENEYY
QAQRAYYNGFFDLTIANARALAGMGKLLTTMNVVRGELPSLKDINIPLPRVTDEDVPPVEIPVPVTMAKKF

Specific function: Involved in the efflux of toxic and relatively hydrophobic compounds. Influences survival inside the host [H]

COG id: COG1538

COG function: function code MU; Outer membrane protein

Gene ontology:

Cell location: Cell outer membrane (Probable) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the outer membrane factor (OMF) (TC 1.B.17) family [H]

Homologues:

None

Paralogues:

None

Copy number: 120 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 240 Molecules/Cell In: Stationary Phase, Rich Media (Based on E. coli). [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003423
- InterPro:   IPR010130 [H]

Pfam domain/function: PF02321 OEP [H]

EC number: NA

Molecular weight: Translated: 53425; Mature: 53425

Theoretical pI: Translated: 8.04; Mature: 8.04

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKNTTKKNLKTLAAAVLLLCLGAPETAKAGPVTVREAVEKALNTNPEIKARFHAFRDVYE
CCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHH
EQGVANGGYWPRIDATAGIGREWLRGENVTDKDYWRKGVRLELSQMLFDGFYTCNQVCRL
HCCCCCCCCCCCCCCCCCCCHHHHCCCCCCCHHHHHCCCHHHHHHHHHHHHHHHHHHHHH
KHSGQARYFEFMDTMESVGLESYRSYADVLRYREMVRLAKRNYDYHQEIFNQVSSRVRAG
HCCCCHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHC
VGAGVDVSQISARVALAQSNYLTELSNLHDVTARFQRIIGELPEENMQAALLPTDGIPAT
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEECCCCCCCC
ASDALKDAYQHNPGFLATMSDINAAKHAVKVQESKFYPRLDFKARHDWSWDLDGIDGRQD
HHHHHHHHHHCCCCEEEEHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCH
ESVVELVMTYNILNGGSDAAAVRQYREKMYRSVDMKDKAATDLRQTMTIAYNDRQIIGQQ
HHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHEEECCHHHHHHH
VRYLDAHRKNLDQVRVAYREQFNIGKRTLLDLLDTENEYYQAQRAYYNGFFDLTIANARA
HHHHHHHHCCHHHHHHHHHHHHCCHHHHHHHHHHCCHHHHHHHHHHHCCEEEEEEHHHHH
LAGMGKLLTTMNVVRGELPSLKDINIPLPRVTDEDVPPVEIPVPVTMAKKF
HHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCEECCCCHHHCCCC
>Mature Secondary Structure
MKNTTKKNLKTLAAAVLLLCLGAPETAKAGPVTVREAVEKALNTNPEIKARFHAFRDVYE
CCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHH
EQGVANGGYWPRIDATAGIGREWLRGENVTDKDYWRKGVRLELSQMLFDGFYTCNQVCRL
HCCCCCCCCCCCCCCCCCCCHHHHCCCCCCCHHHHHCCCHHHHHHHHHHHHHHHHHHHHH
KHSGQARYFEFMDTMESVGLESYRSYADVLRYREMVRLAKRNYDYHQEIFNQVSSRVRAG
HCCCCHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHC
VGAGVDVSQISARVALAQSNYLTELSNLHDVTARFQRIIGELPEENMQAALLPTDGIPAT
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEECCCCCCCC
ASDALKDAYQHNPGFLATMSDINAAKHAVKVQESKFYPRLDFKARHDWSWDLDGIDGRQD
HHHHHHHHHHCCCCEEEEHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCH
ESVVELVMTYNILNGGSDAAAVRQYREKMYRSVDMKDKAATDLRQTMTIAYNDRQIIGQQ
HHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHEEECCHHHHHHH
VRYLDAHRKNLDQVRVAYREQFNIGKRTLLDLLDTENEYYQAQRAYYNGFFDLTIANARA
HHHHHHHHCCHHHHHHHHHHHHCCHHHHHHHHHHCCHHHHHHHHHHHCCEEEEEEHHHHH
LAGMGKLLTTMNVVRGELPSLKDINIPLPRVTDEDVPPVEIPVPVTMAKKF
HHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCEECCCCHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 12271122 [H]