Definition Chlorobium phaeobacteroides DSM 266 chromosome, complete genome.
Accession NC_008639
Length 3,133,902

Click here to switch to the map view.

The map label for this gene is 119357640

Identifier: 119357640

GI number: 119357640

Start: 2123518

End: 2124231

Strand: Reverse

Name: 119357640

Synonym: Cpha266_1844

Alternate gene names: NA

Gene position: 2124231-2123518 (Counterclockwise)

Preceding gene: 119357641

Following gene: 119357639

Centisome position: 67.78

GC content: 48.04

Gene sequence:

>714_bases
ATGGCGGGTGTGTGTACGATCGGCAAGAGGCAATTCGGAGGCGATGAGCTGCTTCCGCTGCTTTCAGGGTATAACCTTTT
GCCTCAATTGATGCAGGGGATGGTTGTTGATCGGGCGTTGCGTACGCTCAGTTGTTCTCCTGCAGAACGGGCTGCTTTTT
ATGGTGCGGAGATTGCCGCAGATGCCGGGTGTATCGAGAAAAAAAAAGCTCAGTTATTGCTTGAGGGAACAGAGGAGAGC
GACCTTGATTTTTTTATCGATCGTCCAGTTCTTCTTGAGCGTTTTAAAAAGATAACGTTTGAGCCTCAACTTGGCAGTAC
CTTTCTGAAGCTGAAAGCCGGTCTTGATCGGGTCGTTTTTTTTATGCTTCGCAATAAAGATCATGAACTGACCAGAGAAC
TTTTTTTTCGTCTCGAATCCGGGGAGGATTCGTTTGAGTCGCTGGCTTCAAGGTTTTCAGAGGGCAGGGAGTCAACCAGC
GGGGGCAGGGTTGGTCCTGTTGAGATGAAACAGTTGAATCCGGCGCTTGCAAGGTTTCTTTCAACAGCGAAAGCCGGAGT
TGTCAATCCTCCGATTGTTCTGGACGGGTTTGGTGTTATTATCCTTTTGCAGGAAAAAATACCGGCAAAACTTGATGAGG
GCCTGAAACCGACTCTTGTCAATCATCTGTTTCAGGAGTGGGTGCAGGCTGAGATCAAAGCGTTTTTTTTCTGA

Upstream 100 bases:

>100_bases
GAAAAAAAGATGCGTTGCGATTGGTCGATGCGATTGGGCAGTTTTTCTTTTGTTTTTTTGCGGTTCCGTTTTTTTTGTAA
TTATTAGTGCGGGTTTTTTT

Downstream 100 bases:

>100_bases
ACGATGTAACGGTTATTGCGGTGCTTGTCTCTATTTTATATTTTTACGTTCTGTTCGGGAACTAATTTCAGGGATATTTT
CATAAAGGGATCCATATTTT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 237; Mature: 236

Protein sequence:

>237_residues
MAGVCTIGKRQFGGDELLPLLSGYNLLPQLMQGMVVDRALRTLSCSPAERAAFYGAEIAADAGCIEKKKAQLLLEGTEES
DLDFFIDRPVLLERFKKITFEPQLGSTFLKLKAGLDRVVFFMLRNKDHELTRELFFRLESGEDSFESLASRFSEGRESTS
GGRVGPVEMKQLNPALARFLSTAKAGVVNPPIVLDGFGVIILLQEKIPAKLDEGLKPTLVNHLFQEWVQAEIKAFFF

Sequences:

>Translated_237_residues
MAGVCTIGKRQFGGDELLPLLSGYNLLPQLMQGMVVDRALRTLSCSPAERAAFYGAEIAADAGCIEKKKAQLLLEGTEES
DLDFFIDRPVLLERFKKITFEPQLGSTFLKLKAGLDRVVFFMLRNKDHELTRELFFRLESGEDSFESLASRFSEGRESTS
GGRVGPVEMKQLNPALARFLSTAKAGVVNPPIVLDGFGVIILLQEKIPAKLDEGLKPTLVNHLFQEWVQAEIKAFFF
>Mature_236_residues
AGVCTIGKRQFGGDELLPLLSGYNLLPQLMQGMVVDRALRTLSCSPAERAAFYGAEIAADAGCIEKKKAQLLLEGTEESD
LDFFIDRPVLLERFKKITFEPQLGSTFLKLKAGLDRVVFFMLRNKDHELTRELFFRLESGEDSFESLASRFSEGRESTSG
GRVGPVEMKQLNPALARFLSTAKAGVVNPPIVLDGFGVIILLQEKIPAKLDEGLKPTLVNHLFQEWVQAEIKAFFF

Specific function: Unknown

COG id: COG0760

COG function: function code O; Parvulin-like peptidyl-prolyl isomerase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 26346; Mature: 26215

Theoretical pI: Translated: 5.47; Mature: 5.47

Prosite motif: PS50198 PPIC_PPIASE_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAGVCTIGKRQFGGDELLPLLSGYNLLPQLMQGMVVDRALRTLSCSPAERAAFYGAEIAA
CCCCCCCCCCCCCCHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHCHHHHH
DAGCIEKKKAQLLLEGTEESDLDFFIDRPVLLERFKKITFEPQLGSTFLKLKAGLDRVVF
CCCHHHHHHHHHEEECCCCCCCCEEECCHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHH
FMLRNKDHELTRELFFRLESGEDSFESLASRFSEGRESTSGGRVGPVEMKQLNPALARFL
HHHHCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCCCCCCCCHHHHHCCHHHHHHH
STAKAGVVNPPIVLDGFGVIILLQEKIPAKLDEGLKPTLVNHLFQEWVQAEIKAFFF
HHHHCCCCCCCEEEECCCEEEEECCCCCHHHCCCCCHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure 
AGVCTIGKRQFGGDELLPLLSGYNLLPQLMQGMVVDRALRTLSCSPAERAAFYGAEIAA
CCCCCCCCCCCCCHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHCHHHHH
DAGCIEKKKAQLLLEGTEESDLDFFIDRPVLLERFKKITFEPQLGSTFLKLKAGLDRVVF
CCCHHHHHHHHHEEECCCCCCCCEEECCHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHH
FMLRNKDHELTRELFFRLESGEDSFESLASRFSEGRESTSGGRVGPVEMKQLNPALARFL
HHHHCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCCCCCCCCHHHHHCCHHHHHHH
STAKAGVVNPPIVLDGFGVIILLQEKIPAKLDEGLKPTLVNHLFQEWVQAEIKAFFF
HHHHCCCCCCCEEEECCCEEEEECCCCCHHHCCCCCHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA