| Definition | Chlorobium phaeobacteroides DSM 266 chromosome, complete genome. |
|---|---|
| Accession | NC_008639 |
| Length | 3,133,902 |
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The map label for this gene is hemA
Identifier: 119357592
GI number: 119357592
Start: 2047899
End: 2049176
Strand: Direct
Name: hemA
Synonym: Cpha266_1795
Alternate gene names: 119357592
Gene position: 2047899-2049176 (Clockwise)
Preceding gene: 119357591
Following gene: 119357593
Centisome position: 65.35
GC content: 45.54
Gene sequence:
>1278_bases ATGAACATCATTTCAGTTGGTGTTAACCACAAAACTGCACCTATTGAAATCCGTGAAAGAATCTCGCTTTCAGAAGTTCA AAACAAGGAATTCATTACGGACCTCATTTCAAGCGGACTGGCCCATGAAGCCATGGTCATTTCTACATGCAACCGTACCG AGCTGTATGTAGTTCCTGCCATGCATGAAGTCACAGGAGAGTATCTGAAAGAGTATCTCATTGCCTATAAGGATGCGCGC AAGGAAGTTCGTCCTGAACATTTTTTCAGTCGTTTCTATTGCGGTACCGCGCGCCATCTTTTTGAGGTATCGAGTGCCAT TGACTCCCTGATTCTCGGAGAGGGTCAGATTTTAGGTCAGGTCAAGGATGCATACAGAATTTCCGCTGAAGTTCAGGCTG CGGGAATTCTCCTCACACGTCTCTGCCATACGGCATTCAGCGTCGCAAAAAAGGTAAAAACCAAAACCAAAATCATGGAG GGGGCGGTTTCCGTCAGCTACGCTGCCGTTGAACTTGCCCAGAAAATTTTCTCAAATCTCTCCATGAAAAAAATCCTGCT CATCGGCGCTGGAGAAACAGGAGAGCTTGCGGCGAAACATATGTTTCAGAAAAATGCCCGCAATATCGTTATAACCAACA GAACTCTTTCAAAAGCCGAAGCTCTTGCTGAAGAGCTCGGAACAAAAAAAGTGCTTCCGTTTGAAAGCTACAAGGATTAC CTTCACGAGTTTGACATTATCATCACCGCTGTCAGCACAAAAGAGTACGTTCTCAGTGAAGCTGAAATGCACCAGACAAT GATGAAACGGAGGCTCAAGCCTGTCATCATTCTGGATCTCGGACTGCCGAGAAATGTTGACCCGGATATTGCAAAACTGC AGAACATGTTTTTGAAGGATATTGATGCTCTCAAACACATTATCGACAAAAATCTTGAACGCCGAAGCGCCGAACTCCCC AAAGTCAACGCCATAATTGAAGAGGAGCTCATTGCTTTTGGTCAGTGGATCAACACGCTCAAAGTCCGTCCGACCATTGT CGATCTCCAGTCGAAGTTCATTGAAATCAAGGAGAAGGAACTCGAACGGTACCGCTACAAGGTCAGCGAAGATGAACTCG CCCGCATGGAGCATCTTACAGACCGAATCCTGAAAAAAATCCTGCATCATCCGATTAAAATGCTCAAGGCTCCTATTGAC ACAGCCAACAACATTCCGAGCAGAGTCAACCTTGTCCGCAACGTTTTTGACCTTGAAGAACCTAATCAACAACACTAA
Upstream 100 bases:
>100_bases CACCGCTTTTAGGATATATTATGCATTCAATGATTGTTGTTCTGCATATCCAGGTCATACTTGCATATCCGGTAATCGGC TCACTTTAAACAACCCTGCT
Downstream 100 bases:
>100_bases ACAAAATCTGTCATCGCTTTGAAAAAACAGCTTATTATCGGCACCAGATCCAGCCCTCTTGCTTTGTGGCAGGCAGAATT CACCAAAGCGGAGCTATCGA
Product: glutamyl-tRNA reductase
Products: NA
Alternate protein names: GluTR
Number of amino acids: Translated: 425; Mature: 425
Protein sequence:
>425_residues MNIISVGVNHKTAPIEIRERISLSEVQNKEFITDLISSGLAHEAMVISTCNRTELYVVPAMHEVTGEYLKEYLIAYKDAR KEVRPEHFFSRFYCGTARHLFEVSSAIDSLILGEGQILGQVKDAYRISAEVQAAGILLTRLCHTAFSVAKKVKTKTKIME GAVSVSYAAVELAQKIFSNLSMKKILLIGAGETGELAAKHMFQKNARNIVITNRTLSKAEALAEELGTKKVLPFESYKDY LHEFDIIITAVSTKEYVLSEAEMHQTMMKRRLKPVIILDLGLPRNVDPDIAKLQNMFLKDIDALKHIIDKNLERRSAELP KVNAIIEEELIAFGQWINTLKVRPTIVDLQSKFIEIKEKELERYRYKVSEDELARMEHLTDRILKKILHHPIKMLKAPID TANNIPSRVNLVRNVFDLEEPNQQH
Sequences:
>Translated_425_residues MNIISVGVNHKTAPIEIRERISLSEVQNKEFITDLISSGLAHEAMVISTCNRTELYVVPAMHEVTGEYLKEYLIAYKDAR KEVRPEHFFSRFYCGTARHLFEVSSAIDSLILGEGQILGQVKDAYRISAEVQAAGILLTRLCHTAFSVAKKVKTKTKIME GAVSVSYAAVELAQKIFSNLSMKKILLIGAGETGELAAKHMFQKNARNIVITNRTLSKAEALAEELGTKKVLPFESYKDY LHEFDIIITAVSTKEYVLSEAEMHQTMMKRRLKPVIILDLGLPRNVDPDIAKLQNMFLKDIDALKHIIDKNLERRSAELP KVNAIIEEELIAFGQWINTLKVRPTIVDLQSKFIEIKEKELERYRYKVSEDELARMEHLTDRILKKILHHPIKMLKAPID TANNIPSRVNLVRNVFDLEEPNQQH >Mature_425_residues MNIISVGVNHKTAPIEIRERISLSEVQNKEFITDLISSGLAHEAMVISTCNRTELYVVPAMHEVTGEYLKEYLIAYKDAR KEVRPEHFFSRFYCGTARHLFEVSSAIDSLILGEGQILGQVKDAYRISAEVQAAGILLTRLCHTAFSVAKKVKTKTKIME GAVSVSYAAVELAQKIFSNLSMKKILLIGAGETGELAAKHMFQKNARNIVITNRTLSKAEALAEELGTKKVLPFESYKDY LHEFDIIITAVSTKEYVLSEAEMHQTMMKRRLKPVIILDLGLPRNVDPDIAKLQNMFLKDIDALKHIIDKNLERRSAELP KVNAIIEEELIAFGQWINTLKVRPTIVDLQSKFIEIKEKELERYRYKVSEDELARMEHLTDRILKKILHHPIKMLKAPID TANNIPSRVNLVRNVFDLEEPNQQH
Specific function: Catalyzes the NADPH-dependent reduction of glutamyl- tRNA(Glu) to glutamate 1-semialdehyde (GSA)
COG id: COG0373
COG function: function code H; Glutamyl-tRNA reductase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the glutamyl-tRNA reductase family
Homologues:
Organism=Escherichia coli, GI1787461, Length=421, Percent_Identity=33.0166270783848, Blast_Score=237, Evalue=1e-63,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): HEM1_CHLPD (A1BHD5)
Other databases:
- EMBL: CP000492 - RefSeq: YP_912236.1 - ProteinModelPortal: A1BHD5 - SMR: A1BHD5 - STRING: A1BHD5 - GeneID: 4570346 - GenomeReviews: CP000492_GR - KEGG: cph:Cpha266_1795 - NMPDR: fig|290317.7.peg.1884 - eggNOG: COG0373 - HOGENOM: HBG732626 - OMA: EVRPEHF - ProtClustDB: PRK00045 - GO: GO:0005737 - HAMAP: MF_00087 - InterPro: IPR000343 - InterPro: IPR015896 - InterPro: IPR015895 - InterPro: IPR016040 - InterPro: IPR018214 - InterPro: IPR006151 - Gene3D: G3DSA:3.40.50.720 - PIRSF: PIRSF000445 - TIGRFAMs: TIGR01035
Pfam domain/function: PF00745 GlutR_dimer; PF05201 GlutR_N; PF01488 Shikimate_DH; SSF69075 4pyrrol_synth_GluRdtase_C; SSF69742 GlutR
EC number: =1.2.1.70
Molecular weight: Translated: 48387; Mature: 48387
Theoretical pI: Translated: 8.68; Mature: 8.68
Prosite motif: PS00747 GLUTR
Important sites: ACT_SITE 50-50 BINDING 109-109 BINDING 120-120
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 3.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNIISVGVNHKTAPIEIRERISLSEVQNKEFITDLISSGLAHEAMVISTCNRTELYVVPA CCEEEECCCCCCCCHHHHHHCCHHHHCCHHHHHHHHHCCCCHHHHEEEECCCCEEEEECC MHEVTGEYLKEYLIAYKDARKEVRPEHFFSRFYCGTARHLFEVSSAIDSLILGEGQILGQ HHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHH VKDAYRISAEVQAAGILLTRLCHTAFSVAKKVKTKTKIMEGAVSVSYAAVELAQKIFSNL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC SMKKILLIGAGETGELAAKHMFQKNARNIVITNRTLSKAEALAEELGTKKVLPFESYKDY CEEEEEEEECCCCHHHHHHHHHHHCCCEEEEECCHHHHHHHHHHHHCCCCCCCHHHHHHH LHEFDIIITAVSTKEYVLSEAEMHQTMMKRRLKPVIILDLGLPRNVDPDIAKLQNMFLKD HHHHHHHEEEECHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCHHHHHHHHHHHHH IDALKHIIDKNLERRSAELPKVNAIIEEELIAFGQWINTLKVRPTIVDLQSKFIEIKEKE HHHHHHHHHCCHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHH LERYRYKVSEDELARMEHLTDRILKKILHHPIKMLKAPIDTANNIPSRVNLVRNVFDLEE HHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHCCCC PNQQH CCCCC >Mature Secondary Structure MNIISVGVNHKTAPIEIRERISLSEVQNKEFITDLISSGLAHEAMVISTCNRTELYVVPA CCEEEECCCCCCCCHHHHHHCCHHHHCCHHHHHHHHHCCCCHHHHEEEECCCCEEEEECC MHEVTGEYLKEYLIAYKDARKEVRPEHFFSRFYCGTARHLFEVSSAIDSLILGEGQILGQ HHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHH VKDAYRISAEVQAAGILLTRLCHTAFSVAKKVKTKTKIMEGAVSVSYAAVELAQKIFSNL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC SMKKILLIGAGETGELAAKHMFQKNARNIVITNRTLSKAEALAEELGTKKVLPFESYKDY CEEEEEEEECCCCHHHHHHHHHHHCCCEEEEECCHHHHHHHHHHHHCCCCCCCHHHHHHH LHEFDIIITAVSTKEYVLSEAEMHQTMMKRRLKPVIILDLGLPRNVDPDIAKLQNMFLKD HHHHHHHEEEECHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCHHHHHHHHHHHHH IDALKHIIDKNLERRSAELPKVNAIIEEELIAFGQWINTLKVRPTIVDLQSKFIEIKEKE HHHHHHHHHCCHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHH LERYRYKVSEDELARMEHLTDRILKKILHHPIKMLKAPIDTANNIPSRVNLVRNVFDLEE HHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHCCCC PNQQH CCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA