| Definition | Chlorobium phaeobacteroides DSM 266 chromosome, complete genome. |
|---|---|
| Accession | NC_008639 |
| Length | 3,133,902 |
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The map label for this gene is 119357568
Identifier: 119357568
GI number: 119357568
Start: 2012921
End: 2013421
Strand: Reverse
Name: 119357568
Synonym: Cpha266_1771
Alternate gene names: NA
Gene position: 2013421-2012921 (Counterclockwise)
Preceding gene: 119357569
Following gene: 119357567
Centisome position: 64.25
GC content: 40.32
Gene sequence:
>501_bases ATGCCTTTTTTTCTTATGTCTTCTACCATTAATTCTATCAAAGAACTTGTCCCGGTTTTACAGACGGCTATCGGACCCAT GATACTTATTTCCGGCCTTGGCCTTCTTCTTCTGACCATGACGAACAGGCTTGGTCGTATCATTGATCGTTCACGTTTGT TGCTCCATGATCTCGAGTCCAATCCTGAACCGTATGTTATGAGAATCAATAGCGAAGTAGCAATTCTCTGGAAGCGAGCC CGCTATATCAGAATCTCGATTCTTCTTGCTTGCATGACCTGTCTTGGCGCCTCATTGCTTATTATTCTTCTGTTTCTTTC AGTGCTTGTCAATCTGGATATTCCGTTTATTGTTTCAGGCATTTTTATTGTGAGCATGTTCTGTCTGATATTTTCTCTGG TCTTTTTTCTCTTTGATGTGAATCTGACTCTTGCTGCTTTGAAAATCGAGCTGGGAAGTCATGAGAAAAAATATCTGATT CTTGAAAAACCTTTATCCTGA
Upstream 100 bases:
>100_bases TCGGAAAATCCCGGAATAAATAAATAGATTCGTATGAAAAAGATCCGTTTTATATGATATACTCTGTTCGGTTTTTATCA ATTTCTTATTAAGTGATGTT
Downstream 100 bases:
>100_bases ACGCTGTTTTGAAATTGTCTGTTCTGATGAATAAAAAGCATCTCTCATTAGCGATTATTATTTTATCACTCTTTCTTTTC AGAGCGGTTTCAGCCGGAGA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 166; Mature: 165
Protein sequence:
>166_residues MPFFLMSSTINSIKELVPVLQTAIGPMILISGLGLLLLTMTNRLGRIIDRSRLLLHDLESNPEPYVMRINSEVAILWKRA RYIRISILLACMTCLGASLLIILLFLSVLVNLDIPFIVSGIFIVSMFCLIFSLVFFLFDVNLTLAALKIELGSHEKKYLI LEKPLS
Sequences:
>Translated_166_residues MPFFLMSSTINSIKELVPVLQTAIGPMILISGLGLLLLTMTNRLGRIIDRSRLLLHDLESNPEPYVMRINSEVAILWKRA RYIRISILLACMTCLGASLLIILLFLSVLVNLDIPFIVSGIFIVSMFCLIFSLVFFLFDVNLTLAALKIELGSHEKKYLI LEKPLS >Mature_165_residues PFFLMSSTINSIKELVPVLQTAIGPMILISGLGLLLLTMTNRLGRIIDRSRLLLHDLESNPEPYVMRINSEVAILWKRAR YIRISILLACMTCLGASLLIILLFLSVLVNLDIPFIVSGIFIVSMFCLIFSLVFFLFDVNLTLAALKIELGSHEKKYLIL EKPLS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 18681; Mature: 18550
Theoretical pI: Translated: 8.88; Mature: 8.88
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.8 %Cys (Translated Protein) 4.2 %Met (Translated Protein) 6.0 %Cys+Met (Translated Protein) 1.8 %Cys (Mature Protein) 3.6 %Met (Mature Protein) 5.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPFFLMSSTINSIKELVPVLQTAIGPMILISGLGLLLLTMTNRLGRIIDRSRLLLHDLES CCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC NPEPYVMRINSEVAILWKRARYIRISILLACMTCLGASLLIILLFLSVLVNLDIPFIVSG CCCCEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHH IFIVSMFCLIFSLVFFLFDVNLTLAALKIELGSHEKKYLILEKPLS HHHHHHHHHHHHHHHHHHHHHHHHHHEEEECCCCCCEEEEEECCCC >Mature Secondary Structure PFFLMSSTINSIKELVPVLQTAIGPMILISGLGLLLLTMTNRLGRIIDRSRLLLHDLES CEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC NPEPYVMRINSEVAILWKRARYIRISILLACMTCLGASLLIILLFLSVLVNLDIPFIVSG CCCCEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHH IFIVSMFCLIFSLVFFLFDVNLTLAALKIELGSHEKKYLILEKPLS HHHHHHHHHHHHHHHHHHHHHHHHHHEEEECCCCCCEEEEEECCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA