| Definition | Chlorobium phaeobacteroides DSM 266 chromosome, complete genome. |
|---|---|
| Accession | NC_008639 |
| Length | 3,133,902 |
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The map label for this gene is 119357550
Identifier: 119357550
GI number: 119357550
Start: 1994305
End: 1994844
Strand: Direct
Name: 119357550
Synonym: Cpha266_1753
Alternate gene names: NA
Gene position: 1994305-1994844 (Clockwise)
Preceding gene: 119357549
Following gene: 119357553
Centisome position: 63.64
GC content: 49.07
Gene sequence:
>540_bases GTGATTGCTAATTTCCGAAATTGGCTGATTTTTAATTTCCGACTACAGGCAGCCTTGTTCGCTTTTGGAAGCGATGCGCA GGCAACAGTAGTTGGTGATAACGGAACCGCAACAGCAACGATTGCCGGCGCAATTTCTGTTGCCAAGTATGAAACAGGCT CAACAACCGGTGGCGATCTGGCTTTCGGCAATATCATTGCAGGCCCTTCATCGGGAACCGTAACCATTAATCCTTTCGGC TCCGGTTCGCGCTCCTTTACAACCGTATCGGGTACCAACCTTTTACCGTTCGGCCCTGCGCAATTTCAGGTAACCGGTGA TGCAAATGCGAACTACACGGTATCGTTACCATCCTCGGATATCACTATTTACAGTGACACAAACACCATGACAGTGGATA GCTTTACGAAAACCGTTACAACCGGAACGTTGACCAATGGTACTGATGTTTTCAGGGTTGGCGGAACGCTTCATGTCGGT GCGAATCAGCCATCCGGAACCTACAGCGGAACCTTTAACGTAACGGCCGCATACAACTAA
Upstream 100 bases:
>100_bases ATCGCCGGAAGGAGGGGGCAATCGTAGAAAAAAGCAACTACCACTTCAAAAAGGAGTAGGAAATCATTGCAAAATGACGT AATCTGAAGCCGCTGCCTGG
Downstream 100 bases:
>100_bases GGGACTCCGTCATTATAAAAATACCGTTTTAGGGCTGATGCTGATATCCCACCAATGAAGGCTGGGTGAACGCATCAGTC GTTTTTCCAGATTCTTTTTA
Product: YapH protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 179; Mature: 179
Protein sequence:
>179_residues MIANFRNWLIFNFRLQAALFAFGSDAQATVVGDNGTATATIAGAISVAKYETGSTTGGDLAFGNIIAGPSSGTVTINPFG SGSRSFTTVSGTNLLPFGPAQFQVTGDANANYTVSLPSSDITIYSDTNTMTVDSFTKTVTTGTLTNGTDVFRVGGTLHVG ANQPSGTYSGTFNVTAAYN
Sequences:
>Translated_179_residues MIANFRNWLIFNFRLQAALFAFGSDAQATVVGDNGTATATIAGAISVAKYETGSTTGGDLAFGNIIAGPSSGTVTINPFG SGSRSFTTVSGTNLLPFGPAQFQVTGDANANYTVSLPSSDITIYSDTNTMTVDSFTKTVTTGTLTNGTDVFRVGGTLHVG ANQPSGTYSGTFNVTAAYN >Mature_179_residues MIANFRNWLIFNFRLQAALFAFGSDAQATVVGDNGTATATIAGAISVAKYETGSTTGGDLAFGNIIAGPSSGTVTINPFG SGSRSFTTVSGTNLLPFGPAQFQVTGDANANYTVSLPSSDITIYSDTNTMTVDSFTKTVTTGTLTNGTDVFRVGGTLHVG ANQPSGTYSGTFNVTAAYN
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 18341; Mature: 18341
Theoretical pI: Translated: 4.50; Mature: 4.50
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.1 %Met (Translated Protein) 1.1 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 1.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIANFRNWLIFNFRLQAALFAFGSDAQATVVGDNGTATATIAGAISVAKYETGSTTGGDL CCCCCCEEEEEEEEEEEEEEEECCCCEEEEECCCCCEEEEEEEEEEEEEEECCCCCCCCE AFGNIIAGPSSGTVTINPFGSGSRSFTTVSGTNLLPFGPAQFQVTGDANANYTVSLPSSD EECEEEECCCCCEEEEEECCCCCCEEEEECCCCCCCCCCCEEEEECCCCCCEEEECCCCC ITIYSDTNTMTVDSFTKTVTTGTLTNGTDVFRVGGTLHVGANQPSGTYSGTFNVTAAYN EEEEECCCEEEECCCEEEEEECEECCCCEEEEECCEEEECCCCCCCCCCCEEEEEEEEC >Mature Secondary Structure MIANFRNWLIFNFRLQAALFAFGSDAQATVVGDNGTATATIAGAISVAKYETGSTTGGDL CCCCCCEEEEEEEEEEEEEEEECCCCEEEEECCCCCEEEEEEEEEEEEEEECCCCCCCCE AFGNIIAGPSSGTVTINPFGSGSRSFTTVSGTNLLPFGPAQFQVTGDANANYTVSLPSSD EECEEEECCCCCEEEEEECCCCCCEEEEECCCCCCCCCCCEEEEECCCCCCEEEECCCCC ITIYSDTNTMTVDSFTKTVTTGTLTNGTDVFRVGGTLHVGANQPSGTYSGTFNVTAAYN EEEEECCCEEEECCCEEEEEECEECCCCEEEEECCEEEECCCCCCCCCCCEEEEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA