Definition Chlorobium phaeobacteroides DSM 266 chromosome, complete genome.
Accession NC_008639
Length 3,133,902

Click here to switch to the map view.

The map label for this gene is 119357516

Identifier: 119357516

GI number: 119357516

Start: 1946605

End: 1947342

Strand: Direct

Name: 119357516

Synonym: Cpha266_1718

Alternate gene names: NA

Gene position: 1946605-1947342 (Clockwise)

Preceding gene: 119357514

Following gene: 119357520

Centisome position: 62.11

GC content: 49.19

Gene sequence:

>738_bases
ATGATGAAAAGCCGATTTTTTAAGGCGAAGAGTTTTACTCTTTATCTGCTTGTATCGTACCTTTTTTCAGCCTGTGCAGT
CCAGGGTCCGGCGCTTGATCAGGCTCTGCAGAAGGCATACCAGAGCGCCATCGTTGATGCGGAAAGAGCCGATCCATCAG
AGATATCAAACAATCTGGTTGCTATTGTGCCCGCAAACGAAAAGCTGATATGGAAGAACAGGGATGATGTTCAGAATGCC
ATGCTGCTCGTTGTCACCTGGACAAACTATAACGGTTATGACGATAAAGTCGGGCAATCGCTCAATCTTTCGAGAGAGGT
TTGGGTAACAACCGCACCGGAGGTAAAGAATTTTTGCAAGGGCATGAAAGAGAACCGGTCGTTGCGGCTGGAGCAGCTTT
TGGGGCTTCCTCCGAAGGCGGGCAAAACGAAATTTGTGGAGATGTGGGTCAAGCCTGGCGATCTTTTCAGGCCAAGCGCA
GATCCGGAGATCAGTGACCGTGAAGCGGAAACAGAGTTCAGAAGAGCCAACATATTCGTGAAGGTGAGCGATGAGTACAG
AAAATGGTTCAATGATCTGAAGATGCAATCATACGGAACCAATGGCTATCCGTGGACCAGACTGGGATATACCTATGACT
GGGGAAATCGCCGCTGTCACATCGGGTTAAGTGAATTCGTGATCATGCCGGGCGCTACCGTCGAGATCAAGGCTGTTACG
CCAACGTCCGACTATTAG

Upstream 100 bases:

>100_bases
TTTATGGCAATTCTGTTTTGCCAATCGTTCATCACTTTTGTATCATTCCTCTATTGCGACGTGTTATTGTGTGATTAAAA
AACTCAAAACAGGTGGCCAG

Downstream 100 bases:

>100_bases
CAGCACGGGGCTCCAATCGTCGAACAACCTTCGATGCCCGGTGGTTACGGGCACATGTTGACCTGCGATGTTGTCATGTT
TTAACCTTTGTTGAAAGACT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 245; Mature: 245

Protein sequence:

>245_residues
MMKSRFFKAKSFTLYLLVSYLFSACAVQGPALDQALQKAYQSAIVDAERADPSEISNNLVAIVPANEKLIWKNRDDVQNA
MLLVVTWTNYNGYDDKVGQSLNLSREVWVTTAPEVKNFCKGMKENRSLRLEQLLGLPPKAGKTKFVEMWVKPGDLFRPSA
DPEISDREAETEFRRANIFVKVSDEYRKWFNDLKMQSYGTNGYPWTRLGYTYDWGNRRCHIGLSEFVIMPGATVEIKAVT
PTSDY

Sequences:

>Translated_245_residues
MMKSRFFKAKSFTLYLLVSYLFSACAVQGPALDQALQKAYQSAIVDAERADPSEISNNLVAIVPANEKLIWKNRDDVQNA
MLLVVTWTNYNGYDDKVGQSLNLSREVWVTTAPEVKNFCKGMKENRSLRLEQLLGLPPKAGKTKFVEMWVKPGDLFRPSA
DPEISDREAETEFRRANIFVKVSDEYRKWFNDLKMQSYGTNGYPWTRLGYTYDWGNRRCHIGLSEFVIMPGATVEIKAVT
PTSDY
>Mature_245_residues
MMKSRFFKAKSFTLYLLVSYLFSACAVQGPALDQALQKAYQSAIVDAERADPSEISNNLVAIVPANEKLIWKNRDDVQNA
MLLVVTWTNYNGYDDKVGQSLNLSREVWVTTAPEVKNFCKGMKENRSLRLEQLLGLPPKAGKTKFVEMWVKPGDLFRPSA
DPEISDREAETEFRRANIFVKVSDEYRKWFNDLKMQSYGTNGYPWTRLGYTYDWGNRRCHIGLSEFVIMPGATVEIKAVT
PTSDY

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 28008; Mature: 28008

Theoretical pI: Translated: 8.71; Mature: 8.71

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
4.1 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
4.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MMKSRFFKAKSFTLYLLVSYLFSACAVQGPALDQALQKAYQSAIVDAERADPSEISNNLV
CCCCHHHCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCCHHHHCCCEE
AIVPANEKLIWKNRDDVQNAMLLVVTWTNYNGYDDKVGQSLNLSREVWVTTAPEVKNFCK
EEEECCCEEEECCCCCCCCEEEEEEEECCCCCCHHHCCCCCCCCEEEEEEECHHHHHHHH
GMKENRSLRLEQLLGLPPKAGKTKFVEMWVKPGDLFRPSADPEISDREAETEFRRANIFV
CHHCCCCEEHHHHHCCCCCCCCCEEEEEEECCCCCCCCCCCCCCCCCHHHHHHEEEEEEE
KVSDEYRKWFNDLKMQSYGTNGYPWTRLGYTYDWGNRRCHIGLSEFVIMPGATVEIKAVT
EECHHHHHHHHHHHHHHCCCCCCCCEECCEEEECCCCEEEEEHHHEEECCCCEEEEEEEC
PTSDY
CCCCC
>Mature Secondary Structure
MMKSRFFKAKSFTLYLLVSYLFSACAVQGPALDQALQKAYQSAIVDAERADPSEISNNLV
CCCCHHHCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCCHHHHCCCEE
AIVPANEKLIWKNRDDVQNAMLLVVTWTNYNGYDDKVGQSLNLSREVWVTTAPEVKNFCK
EEEECCCEEEECCCCCCCCEEEEEEEECCCCCCHHHCCCCCCCCEEEEEEECHHHHHHHH
GMKENRSLRLEQLLGLPPKAGKTKFVEMWVKPGDLFRPSADPEISDREAETEFRRANIFV
CHHCCCCEEHHHHHCCCCCCCCCEEEEEEECCCCCCCCCCCCCCCCCHHHHHHEEEEEEE
KVSDEYRKWFNDLKMQSYGTNGYPWTRLGYTYDWGNRRCHIGLSEFVIMPGATVEIKAVT
EECHHHHHHHHHHHHHHCCCCCCCCEECCEEEECCCCEEEEEHHHEEECCCCEEEEEEEC
PTSDY
CCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA