| Definition | Chlorobium phaeobacteroides DSM 266 chromosome, complete genome. |
|---|---|
| Accession | NC_008639 |
| Length | 3,133,902 |
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The map label for this gene is 119357412
Identifier: 119357412
GI number: 119357412
Start: 1832461
End: 1832877
Strand: Reverse
Name: 119357412
Synonym: Cpha266_1611
Alternate gene names: NA
Gene position: 1832877-1832461 (Counterclockwise)
Preceding gene: 119357413
Following gene: 119357411
Centisome position: 58.49
GC content: 54.68
Gene sequence:
>417_bases ATGGTGTTCAGTTCGGATTCGGATTTGTTGCGGTTTCAGCCGTATGTGTTTGAGCATGGGGTGGTGTCGTTTGAGGAGTA TCATGCCCGGGGTGTGGATGATATTGTGGATGAATTGTTGATATCGTGGATTCCGGCTCAGGGTACGGTGGATGTGGATT CGTTTGATGTAGAGCGGCTGGATGCTTTGCAGTGGGTTATGGCTTCGGTGTATCGGGTGCTGGGGTGGTATGTGTTGCCT CGTCTGGCGGCTTCGGTTGGCGGGCAGGGGTTGTTGACGATGATGGATCATTACCGGAGGGAGTACGGGATGGAGGTTCA GCGGGTTATCCGTAAGGGTGTTCGGTATGATACGGGGAGCGGGTTTGAGCGGATCGAGCTGGTTTCGGGGAGTGAACAGC AGAGGCTGAGGAGGTAG
Upstream 100 bases:
>100_bases GATGACGATGCGTGGGGTTGGTACTATGTGTGATGCGTGGGGAGGGGGGATTCCCTGCTCCCCTTTTTTTATACCGGTAT TGTTGTGAGGTGGGGGTTGT
Downstream 100 bases:
>100_bases TGCGGGATGGCATGTTAGCTGGATGGCTGGATGGCTGGATGGCTGGAAAGTGGATAGTGGATAGTGGGAAGTGGGAAGTG GGATGTGGGATGTGGGAAGT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 138; Mature: 138
Protein sequence:
>138_residues MVFSSDSDLLRFQPYVFEHGVVSFEEYHARGVDDIVDELLISWIPAQGTVDVDSFDVERLDALQWVMASVYRVLGWYVLP RLAASVGGQGLLTMMDHYRREYGMEVQRVIRKGVRYDTGSGFERIELVSGSEQQRLRR
Sequences:
>Translated_138_residues MVFSSDSDLLRFQPYVFEHGVVSFEEYHARGVDDIVDELLISWIPAQGTVDVDSFDVERLDALQWVMASVYRVLGWYVLP RLAASVGGQGLLTMMDHYRREYGMEVQRVIRKGVRYDTGSGFERIELVSGSEQQRLRR >Mature_138_residues MVFSSDSDLLRFQPYVFEHGVVSFEEYHARGVDDIVDELLISWIPAQGTVDVDSFDVERLDALQWVMASVYRVLGWYVLP RLAASVGGQGLLTMMDHYRREYGMEVQRVIRKGVRYDTGSGFERIELVSGSEQQRLRR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 15923; Mature: 15923
Theoretical pI: Translated: 4.78; Mature: 4.78
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.6 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 3.6 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVFSSDSDLLRFQPYVFEHGVVSFEEYHARGVDDIVDELLISWIPAQGTVDVDSFDVERL CCCCCCCCCHHHCCHHHHCCCCCHHHHHCCCHHHHHHHHHHHHCCCCCCCCCCCCCHHHH DALQWVMASVYRVLGWYVLPRLAASVGGQGLLTMMDHYRREYGMEVQRVIRKGVRYDTGS HHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCHHHHHHHHHCCCCCCCC GFERIELVSGSEQQRLRR CCCEEEECCCCHHHHHCC >Mature Secondary Structure MVFSSDSDLLRFQPYVFEHGVVSFEEYHARGVDDIVDELLISWIPAQGTVDVDSFDVERL CCCCCCCCCHHHCCHHHHCCCCCHHHHHCCCHHHHHHHHHHHHCCCCCCCCCCCCCHHHH DALQWVMASVYRVLGWYVLPRLAASVGGQGLLTMMDHYRREYGMEVQRVIRKGVRYDTGS HHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCHHHHHHHHHCCCCCCCC GFERIELVSGSEQQRLRR CCCEEEECCCCHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA