Definition Chlorobium phaeobacteroides DSM 266 chromosome, complete genome.
Accession NC_008639
Length 3,133,902

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The map label for this gene is 119357330

Identifier: 119357330

GI number: 119357330

Start: 1735748

End: 1736404

Strand: Reverse

Name: 119357330

Synonym: Cpha266_1528

Alternate gene names: NA

Gene position: 1736404-1735748 (Counterclockwise)

Preceding gene: 119357331

Following gene: 119357329

Centisome position: 55.41

GC content: 44.75

Gene sequence:

>657_bases
ATGTCTCTGCTTGAAAAAATCAGTACATCGACCTGTTCGTTGCGTCTAAAAAACGACTGGTTGAAAATTTTCACATGTCC
GATTCCCTCTTCTGATTTTCTCTCTTTTGTCGGAGTCGCAACGATGGATGCTCCCCAGCATGCCGTTCTTGCGCTCCTGT
ACGATGTCGATGTTGCCACCCAATGGGTCTGGAAAACAAGAGAGATGAAAGTCCTCAAAGAGTTGTCTGAAGATGAGGGG
AGAATTGTCTATCAGCTTGTAAGCGCACCCTGGCCTGTATCTGACAGAGAGATTATCACATTGTCCCAGGGATATATAGA
TCCTGAGACATCTGAAGTTTTTATCAAGCTTGAGTGCAGACCCGATTACCTGCCTTTAAACGACAAGTATGTCAGGGTTC
CACAGCTTGAAGGAGCATGGAATATCATTCCCCTTTCTGAAAATCAGTGCCGTGTGGTTTTCAGACTCCATATAGAGCCC
GGCGGCGAAATTCCTGCATGGCTTGCCAACATCGCTGTTATTGATACTCCGTTTCATACCATGAACAATATGCGGGAGTG
GGTGAAAAAAGAGAAGTATCAGAATCCCGTGGATGCTCCCTTCAAAAAATCGTCACGGGATGTTATCAAACAATACGATC
AGTTTATAACTGAGTAA

Upstream 100 bases:

>100_bases
ATCAGATCCTCTTGTGAAATTTTCTTCTCAAGTTCCTGTTACTCTTGTTCGCTGATCAGGATGCGGCCTTTCATTTTTTT
AATCAAAACTACGGCATGCT

Downstream 100 bases:

>100_bases
GCGCAGTTTACGTGGTGAGGTATTTTAAGTCATACAAATATCATCAGGTATGGATGTACATTCAGCTCTTAACGTGAACT
GGACGTTTCGTATAGAACAT

Product: cyclase/dehydrase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 218; Mature: 217

Protein sequence:

>218_residues
MSLLEKISTSTCSLRLKNDWLKIFTCPIPSSDFLSFVGVATMDAPQHAVLALLYDVDVATQWVWKTREMKVLKELSEDEG
RIVYQLVSAPWPVSDREIITLSQGYIDPETSEVFIKLECRPDYLPLNDKYVRVPQLEGAWNIIPLSENQCRVVFRLHIEP
GGEIPAWLANIAVIDTPFHTMNNMREWVKKEKYQNPVDAPFKKSSRDVIKQYDQFITE

Sequences:

>Translated_218_residues
MSLLEKISTSTCSLRLKNDWLKIFTCPIPSSDFLSFVGVATMDAPQHAVLALLYDVDVATQWVWKTREMKVLKELSEDEG
RIVYQLVSAPWPVSDREIITLSQGYIDPETSEVFIKLECRPDYLPLNDKYVRVPQLEGAWNIIPLSENQCRVVFRLHIEP
GGEIPAWLANIAVIDTPFHTMNNMREWVKKEKYQNPVDAPFKKSSRDVIKQYDQFITE
>Mature_217_residues
SLLEKISTSTCSLRLKNDWLKIFTCPIPSSDFLSFVGVATMDAPQHAVLALLYDVDVATQWVWKTREMKVLKELSEDEGR
IVYQLVSAPWPVSDREIITLSQGYIDPETSEVFIKLECRPDYLPLNDKYVRVPQLEGAWNIIPLSENQCRVVFRLHIEPG
GEIPAWLANIAVIDTPFHTMNNMREWVKKEKYQNPVDAPFKKSSRDVIKQYDQFITE

Specific function: May play a role in the interaction of the bacterium with animal cells [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 START domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002913 [H]

Pfam domain/function: PF01852 START [H]

EC number: NA

Molecular weight: Translated: 25177; Mature: 25046

Theoretical pI: Translated: 4.96; Mature: 4.96

Prosite motif: PS50848 START

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.8 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
4.1 %Cys+Met (Translated Protein)
1.8 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSLLEKISTSTCSLRLKNDWLKIFTCPIPSSDFLSFVGVATMDAPQHAVLALLYDVDVAT
CCHHHHHCCCEEEEEEECCEEEEEECCCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHH
QWVWKTREMKVLKELSEDEGRIVYQLVSAPWPVSDREIITLSQGYIDPETSEVFIKLECR
HHHHHHHHHHHHHHHCCCCCEEEEEEECCCCCCCCCEEEEEECCCCCCCCCEEEEEEECC
PDYLPLNDKYVRVPQLEGAWNIIPLSENQCRVVFRLHIEPGGEIPAWLANIAVIDTPFHT
CCCCCCCCCEEECCCCCCCEEEEECCCCCEEEEEEEEECCCCCCHHHHHEEEEEECCHHH
MNNMREWVKKEKYQNPVDAPFKKSSRDVIKQYDQFITE
HHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHCC
>Mature Secondary Structure 
SLLEKISTSTCSLRLKNDWLKIFTCPIPSSDFLSFVGVATMDAPQHAVLALLYDVDVAT
CHHHHHCCCEEEEEEECCEEEEEECCCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHH
QWVWKTREMKVLKELSEDEGRIVYQLVSAPWPVSDREIITLSQGYIDPETSEVFIKLECR
HHHHHHHHHHHHHHHCCCCCEEEEEEECCCCCCCCCEEEEEECCCCCCCCCEEEEEEECC
PDYLPLNDKYVRVPQLEGAWNIIPLSENQCRVVFRLHIEPGGEIPAWLANIAVIDTPFHT
CCCCCCCCCEEECCCCCCCEEEEECCCCCEEEEEEEEECCCCCCHHHHHEEEEEECCHHH
MNNMREWVKKEKYQNPVDAPFKKSSRDVIKQYDQFITE
HHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 10984043; 11276083 [H]