Definition Chlorobium phaeobacteroides DSM 266 chromosome, complete genome.
Accession NC_008639
Length 3,133,902

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The map label for this gene is 119357329

Identifier: 119357329

GI number: 119357329

Start: 1735060

End: 1735698

Strand: Reverse

Name: 119357329

Synonym: Cpha266_1527

Alternate gene names: NA

Gene position: 1735698-1735060 (Counterclockwise)

Preceding gene: 119357330

Following gene: 119357327

Centisome position: 55.38

GC content: 44.91

Gene sequence:

>639_bases
ATGGATGTACATTCAGCTCTTAACGTGAACTGGACGTTTCGTATAGAACATAAAGGAATCAGAATATTTTCATCGAAAGT
GCACGGTTCCGATATTCTTGGATTTAAAGGCGAAACAGAGCTTCCCGCTACCTTTAAAAAACTGATCAGTTTGTTTTATG
ATACCAACAGTTATCATCGCTGGGTTCACCAGTTGGCAGCAATGGATATTCTTGAAAAAAAAGGCTGTCTTGAGTATGTT
GTGCGTCAGGTCATCAATACGCCGTGGCCACTTTTGAAACGTGAAATGATTGTGCGTACAGGATTGGAACCTGCCGGAGA
TAATGCCGTTGCGGTCACCATGACCTCTGAGCCTGACTATTTACCGCCTAACCCCGATTATTATCGAGTGCGGCATGCGC
GGGGAGTCTGGATTTTTTCTCCGATAGACCACGGACGGGTGCATATTTCTTTTGTCATGCATGTTGATCCCGGAAAAGAT
GTTCCTTCGCCGGTCAGCAATACAGCCATGTTCGAGGTTCCCTTTTATTCGTTGCAGAATATGAGATCCCTGATTGCCGA
CTGTTCCTATAATCCGCCATATCCTGATGAGATTGACAACCACCTCTGCATTATCGAAGATATTCCTGACATGCCCTGA

Upstream 100 bases:

>100_bases
AAATCGTCACGGGATGTTATCAAACAATACGATCAGTTTATAACTGAGTAAGCGCAGTTTACGTGGTGAGGTATTTTAAG
TCATACAAATATCATCAGGT

Downstream 100 bases:

>100_bases
ACAGTTTATCCTGTTTTACAGGAACGGCGCCAACCTCCTGGCAGACTGATCCGGCAGCAAGATTGGCGATTGCTGCGCTG
GTCTCAATATCGAGACCGGA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 212; Mature: 212

Protein sequence:

>212_residues
MDVHSALNVNWTFRIEHKGIRIFSSKVHGSDILGFKGETELPATFKKLISLFYDTNSYHRWVHQLAAMDILEKKGCLEYV
VRQVINTPWPLLKREMIVRTGLEPAGDNAVAVTMTSEPDYLPPNPDYYRVRHARGVWIFSPIDHGRVHISFVMHVDPGKD
VPSPVSNTAMFEVPFYSLQNMRSLIADCSYNPPYPDEIDNHLCIIEDIPDMP

Sequences:

>Translated_212_residues
MDVHSALNVNWTFRIEHKGIRIFSSKVHGSDILGFKGETELPATFKKLISLFYDTNSYHRWVHQLAAMDILEKKGCLEYV
VRQVINTPWPLLKREMIVRTGLEPAGDNAVAVTMTSEPDYLPPNPDYYRVRHARGVWIFSPIDHGRVHISFVMHVDPGKD
VPSPVSNTAMFEVPFYSLQNMRSLIADCSYNPPYPDEIDNHLCIIEDIPDMP
>Mature_212_residues
MDVHSALNVNWTFRIEHKGIRIFSSKVHGSDILGFKGETELPATFKKLISLFYDTNSYHRWVHQLAAMDILEKKGCLEYV
VRQVINTPWPLLKREMIVRTGLEPAGDNAVAVTMTSEPDYLPPNPDYYRVRHARGVWIFSPIDHGRVHISFVMHVDPGKD
VPSPVSNTAMFEVPFYSLQNMRSLIADCSYNPPYPDEIDNHLCIIEDIPDMP

Specific function: May play a role in the interaction of the bacterium with animal cells [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 START domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002913 [H]

Pfam domain/function: PF01852 START [H]

EC number: NA

Molecular weight: Translated: 24281; Mature: 24281

Theoretical pI: Translated: 6.34; Mature: 6.34

Prosite motif: PS50848 START

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
3.8 %Met     (Translated Protein)
5.2 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
3.8 %Met     (Mature Protein)
5.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDVHSALNVNWTFRIEHKGIRIFSSKVHGSDILGFKGETELPATFKKLISLFYDTNSYHR
CCCCCEECCEEEEEEECCCEEEEECCCCCCEEECCCCCCCCCHHHHHHHHHHHCCCHHHH
WVHQLAAMDILEKKGCLEYVVRQVINTPWPLLKREMIVRTGLEPAGDNAVAVTMTSEPDY
HHHHHHHHHHHHHCCHHHHHHHHHHCCCHHHHHHHHHHHCCCCCCCCCEEEEEECCCCCC
LPPNPDYYRVRHARGVWIFSPIDHGRVHISFVMHVDPGKDVPSPVSNTAMFEVPFYSLQN
CCCCCCEEEEEECCCEEEECCCCCCEEEEEEEEEECCCCCCCCCCCCCEEEEECHHHHHH
MRSLIADCSYNPPYPDEIDNHLCIIEDIPDMP
HHHHHHHCCCCCCCCCCCCCCEEEEECCCCCC
>Mature Secondary Structure
MDVHSALNVNWTFRIEHKGIRIFSSKVHGSDILGFKGETELPATFKKLISLFYDTNSYHR
CCCCCEECCEEEEEEECCCEEEEECCCCCCEEECCCCCCCCCHHHHHHHHHHHCCCHHHH
WVHQLAAMDILEKKGCLEYVVRQVINTPWPLLKREMIVRTGLEPAGDNAVAVTMTSEPDY
HHHHHHHHHHHHHCCHHHHHHHHHHCCCHHHHHHHHHHHCCCCCCCCCEEEEEECCCCCC
LPPNPDYYRVRHARGVWIFSPIDHGRVHISFVMHVDPGKDVPSPVSNTAMFEVPFYSLQN
CCCCCCEEEEEECCCEEEECCCCCCEEEEEEEEEECCCCCCCCCCCCCEEEEECHHHHHH
MRSLIADCSYNPPYPDEIDNHLCIIEDIPDMP
HHHHHHHCCCCCCCCCCCCCCEEEEECCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 10984043; 11276083 [H]