| Definition | Chlorobium phaeobacteroides DSM 266 chromosome, complete genome. |
|---|---|
| Accession | NC_008639 |
| Length | 3,133,902 |
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The map label for this gene is 119357319
Identifier: 119357319
GI number: 119357319
Start: 1724920
End: 1725660
Strand: Reverse
Name: 119357319
Synonym: Cpha266_1517
Alternate gene names: NA
Gene position: 1725660-1724920 (Counterclockwise)
Preceding gene: 119357320
Following gene: 119357318
Centisome position: 55.06
GC content: 40.76
Gene sequence:
>741_bases ATGACACCAATTGACCTGACCGACGTAACGAAATACGTTGAAACACATATTGGCGGCTTTCATCAGAAAAGAATAGCAAG TCTTGATGGATTAAGCCTTATAAAGGTATTGAAAAGAAAAAATCCCTACCTTTTCAAGGCAAAGTACCTCCTGACTTCAG AAGAGATTGTCAGAGGACTGGTTGATGCGCACATATCATCAAATGAGGAAACTGTTTTCGGAGATTGGCTTGAAGGATTG GCGATTTTTATCAATGAAAAAGTATATGGAGGTCGCAAATCCGGTATCAACGGTATCGACCTGGAGTTTGATAAAGAGGG CAAGCGCTTCATCGTCAATAGCAAGTCAGGTCCAAATTGGGGTAATGCAAGCCAGATCGCTAAAATGAAATCTGATTTCA AAACTGCGGCAAAAACTCTCCGAACCGGTAATTCAGGACTTCAGGTTGTTGCTGTCAACGGCTGCTGTTACGGGAGAAAT AATAGTCCTGATCAAGGGGATTATTTCAAGTACTGCGGACAGGATTTTTGGGATTTTATTTCGGGGGATACGAATCTCTA TACTGAGCTGATTGAGCCTTTGGGGTATAAGGCGAAAGAAAAAAACGATGAATTCCAGGAATCTTATGCCAAGATGATTA ATAAATTCACGTTGCAATTCAGTCTGGAATACTGTGATGATAACGGTGCCATCAACTGGAAAAAACTGGTTCAATTCAAT TCATCCACATCGTCTCATTAA
Upstream 100 bases:
>100_bases AGAAACTCCATTGGCATTGAAATTATGACGGAGTATTATGAGATGGTTAAAAATGAACTGAAACCGTCAGAACTCTATCT CCTTGAACAACAAAAAGGAT
Downstream 100 bases:
>100_bases GGGGTTGAGAGATATCCTTGTTCATCCTGATGCGGTGAAGGTTGGTCGTGGTCTTTAAGTTTTGTTTGTTTTTCTTGTGC GTTGTACCTTGTATGGCTTG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 246; Mature: 245
Protein sequence:
>246_residues MTPIDLTDVTKYVETHIGGFHQKRIASLDGLSLIKVLKRKNPYLFKAKYLLTSEEIVRGLVDAHISSNEETVFGDWLEGL AIFINEKVYGGRKSGINGIDLEFDKEGKRFIVNSKSGPNWGNASQIAKMKSDFKTAAKTLRTGNSGLQVVAVNGCCYGRN NSPDQGDYFKYCGQDFWDFISGDTNLYTELIEPLGYKAKEKNDEFQESYAKMINKFTLQFSLEYCDDNGAINWKKLVQFN SSTSSH
Sequences:
>Translated_246_residues MTPIDLTDVTKYVETHIGGFHQKRIASLDGLSLIKVLKRKNPYLFKAKYLLTSEEIVRGLVDAHISSNEETVFGDWLEGL AIFINEKVYGGRKSGINGIDLEFDKEGKRFIVNSKSGPNWGNASQIAKMKSDFKTAAKTLRTGNSGLQVVAVNGCCYGRN NSPDQGDYFKYCGQDFWDFISGDTNLYTELIEPLGYKAKEKNDEFQESYAKMINKFTLQFSLEYCDDNGAINWKKLVQFN SSTSSH >Mature_245_residues TPIDLTDVTKYVETHIGGFHQKRIASLDGLSLIKVLKRKNPYLFKAKYLLTSEEIVRGLVDAHISSNEETVFGDWLEGLA IFINEKVYGGRKSGINGIDLEFDKEGKRFIVNSKSGPNWGNASQIAKMKSDFKTAAKTLRTGNSGLQVVAVNGCCYGRNN SPDQGDYFKYCGQDFWDFISGDTNLYTELIEPLGYKAKEKNDEFQESYAKMINKFTLQFSLEYCDDNGAINWKKLVQFNS STSSH
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 27711; Mature: 27580
Theoretical pI: Translated: 7.44; Mature: 7.44
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 0.8 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTPIDLTDVTKYVETHIGGFHQKRIASLDGLSLIKVLKRKNPYLFKAKYLLTSEEIVRGL CCCCCHHHHHHHHHHHHCCHHHHHHHHCCHHHHHHHHHCCCCCEEEEEEHHCHHHHHHHH VDAHISSNEETVFGDWLEGLAIFINEKVYGGRKSGINGIDLEFDKEGKRFIVNSKSGPNW HHHHCCCCCCEEHHHHHHHHHHHHHCHHCCCCCCCCCCCCEEECCCCCEEEEECCCCCCC GNASQIAKMKSDFKTAAKTLRTGNSGLQVVAVNGCCYGRNNSPDQGDYFKYCGQDFWDFI CCHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEECEEECCCCCCCCCHHHHHHHHHHHHHH SGDTNLYTELIEPLGYKAKEKNDEFQESYAKMINKFTLQFSLEYCDDNGAINWKKLVQFN CCCHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHEEEEEEEEECCCCCCCHHHHEEEC SSTSSH CCCCCC >Mature Secondary Structure TPIDLTDVTKYVETHIGGFHQKRIASLDGLSLIKVLKRKNPYLFKAKYLLTSEEIVRGL CCCCHHHHHHHHHHHHCCHHHHHHHHCCHHHHHHHHHCCCCCEEEEEEHHCHHHHHHHH VDAHISSNEETVFGDWLEGLAIFINEKVYGGRKSGINGIDLEFDKEGKRFIVNSKSGPNW HHHHCCCCCCEEHHHHHHHHHHHHHCHHCCCCCCCCCCCCEEECCCCCEEEEECCCCCCC GNASQIAKMKSDFKTAAKTLRTGNSGLQVVAVNGCCYGRNNSPDQGDYFKYCGQDFWDFI CCHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEECEEECCCCCCCCCHHHHHHHHHHHHHH SGDTNLYTELIEPLGYKAKEKNDEFQESYAKMINKFTLQFSLEYCDDNGAINWKKLVQFN CCCHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHEEEEEEEEECCCCCCCHHHHEEEC SSTSSH CCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA