| Definition | Chlorobium phaeobacteroides DSM 266 chromosome, complete genome. |
|---|---|
| Accession | NC_008639 |
| Length | 3,133,902 |
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The map label for this gene is msrAB [H]
Identifier: 119357267
GI number: 119357267
Start: 1660235
End: 1661236
Strand: Reverse
Name: msrAB [H]
Synonym: Cpha266_1459
Alternate gene names: 119357267
Gene position: 1661236-1660235 (Counterclockwise)
Preceding gene: 119357269
Following gene: 119357266
Centisome position: 53.01
GC content: 49.6
Gene sequence:
>1002_bases ATGGTAAACAACAGAAAAACAGGAATTTCGGTTTCTGCTGCTCTGGCGGCAGTTCTTCTCGGTATCGCGCTCTTTCTGTT TTACCAGTCGGGCACGGGTTCATTTCCCTTTACATCAAAGGCAACAAGTATTCAAAAGGAGACGCATATGACACAGAGAC CACTGACACCCGAAGAGGAACGGGTGATCGTTCATAAAGGCACCGAGAGGCCATTCACCGGAGCATATTACAAAAACACG GAAGATGGCGTCTATCATTGCAGGCGATGCGACGCACCGCTTTTTTCTTCAAAGGATAAATTCGATTCCGGTACCGGATG GCCAAGTTTTGATGACGCTATTGCGGGCGCGGTAAAAGAGGTTCCCGATACCGATGGTCGGCGCACAGAAATAGTTTGTG CCAGGTGCGGCGCCCATCTTGGTCACGTTTTTTTCAATGAGGGGATGACCGCAAAAAGCGTTCGGCATTGCGTTAACTCG ATCTCTCTTCTTTTTCATCCTGATGCGGAAGCTGCTCCTGTAACTCAAAAAGCGGTATTTGCCGGCGGCTGTTTCTGGGG CGTCGAGTACCATTTCAGTAAAACAAAAGGCGTGCTTTCCGTCACTTCGGGGTATACCGGAGGCTCAATCGAAAATCCAT CCTATAAACAGGTCTGTTCGGGGCGCACTGGTCATGCAGAAGCTGTTGAGATTGCGTTCGACCCCCGTGTTGTCAGCTAC GAAGCCCTTGCAAAGCTGTTTTTCGAGATTCACGATCCTACCCAGCTCAATCGGCAGGGGCCCGATATGGGAACGCAGTA CCGATCGGCTGTGTTTTATTCCGATGAAGAACAGAAAAAAACAGCCGAAAAACTCATCGGGGAGTTGAAGGAAAAGGGGT ACAATGTCGTTACCACCATTGAACCTGCCGGAACCTTCTGGAATGCCGAGGAGTACCATCAGGACTACTACCGGAAAACG GGTCATCAGCCCTACTGTCACATCTATCAAAAGCGTTTTTAA
Upstream 100 bases:
>100_bases AAGTGCAGAGGGGTTGAAGGTGCAGGAACAGAGAGGAAGAAAGAGAGCACGTTGCAAAGATGCCTCTTTCCGGGAACATA AGGTAAAGGAGCGACCGAAA
Downstream 100 bases:
>100_bases TTCGCGTTATGATAAAAAAAAGAGGGCCATCTGCTTGTCAGGCGGCTTTTTTTATTCTATATTATTAGCATATGCCAATA ACAATGGCGAGATATGGTAT
Product: bifunctional methionine sulfoxide reductase B/A protein
Products: NA
Alternate protein names: Peptide methionine sulfoxide reductase msrB; Peptide-methionine (R)-S-oxide reductase; Peptide methionine sulfoxide reductase msrA; Protein-methionine-S-oxide reductase; Peptide-methionine (S)-S-oxide reductase; Peptide Met(O) reductase [H]
Number of amino acids: Translated: 333; Mature: 333
Protein sequence:
>333_residues MVNNRKTGISVSAALAAVLLGIALFLFYQSGTGSFPFTSKATSIQKETHMTQRPLTPEEERVIVHKGTERPFTGAYYKNT EDGVYHCRRCDAPLFSSKDKFDSGTGWPSFDDAIAGAVKEVPDTDGRRTEIVCARCGAHLGHVFFNEGMTAKSVRHCVNS ISLLFHPDAEAAPVTQKAVFAGGCFWGVEYHFSKTKGVLSVTSGYTGGSIENPSYKQVCSGRTGHAEAVEIAFDPRVVSY EALAKLFFEIHDPTQLNRQGPDMGTQYRSAVFYSDEEQKKTAEKLIGELKEKGYNVVTTIEPAGTFWNAEEYHQDYYRKT GHQPYCHIYQKRF
Sequences:
>Translated_333_residues MVNNRKTGISVSAALAAVLLGIALFLFYQSGTGSFPFTSKATSIQKETHMTQRPLTPEEERVIVHKGTERPFTGAYYKNT EDGVYHCRRCDAPLFSSKDKFDSGTGWPSFDDAIAGAVKEVPDTDGRRTEIVCARCGAHLGHVFFNEGMTAKSVRHCVNS ISLLFHPDAEAAPVTQKAVFAGGCFWGVEYHFSKTKGVLSVTSGYTGGSIENPSYKQVCSGRTGHAEAVEIAFDPRVVSY EALAKLFFEIHDPTQLNRQGPDMGTQYRSAVFYSDEEQKKTAEKLIGELKEKGYNVVTTIEPAGTFWNAEEYHQDYYRKT GHQPYCHIYQKRF >Mature_333_residues MVNNRKTGISVSAALAAVLLGIALFLFYQSGTGSFPFTSKATSIQKETHMTQRPLTPEEERVIVHKGTERPFTGAYYKNT EDGVYHCRRCDAPLFSSKDKFDSGTGWPSFDDAIAGAVKEVPDTDGRRTEIVCARCGAHLGHVFFNEGMTAKSVRHCVNS ISLLFHPDAEAAPVTQKAVFAGGCFWGVEYHFSKTKGVLSVTSGYTGGSIENPSYKQVCSGRTGHAEAVEIAFDPRVVSY EALAKLFFEIHDPTQLNRQGPDMGTQYRSAVFYSDEEQKKTAEKLIGELKEKGYNVVTTIEPAGTFWNAEEYHQDYYRKT GHQPYCHIYQKRF
Specific function: Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine [H]
COG id: COG0225
COG function: function code O; Peptide methionine sulfoxide reductase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: In the C-terminal section; belongs to the msrA Met sulfoxide reductase family [H]
Homologues:
Organism=Homo sapiens, GI6912516, Length=151, Percent_Identity=48.3443708609272, Blast_Score=137, Evalue=1e-32, Organism=Homo sapiens, GI208609995, Length=151, Percent_Identity=48.3443708609272, Blast_Score=136, Evalue=2e-32, Organism=Homo sapiens, GI117606353, Length=126, Percent_Identity=47.6190476190476, Blast_Score=114, Evalue=1e-25, Organism=Homo sapiens, GI301336164, Length=119, Percent_Identity=42.8571428571429, Blast_Score=99, Evalue=6e-21, Organism=Homo sapiens, GI301336162, Length=119, Percent_Identity=42.8571428571429, Blast_Score=99, Evalue=6e-21, Organism=Homo sapiens, GI73089054, Length=119, Percent_Identity=42.8571428571429, Blast_Score=99, Evalue=6e-21, Organism=Homo sapiens, GI37620216, Length=119, Percent_Identity=42.8571428571429, Blast_Score=98, Evalue=8e-21, Organism=Homo sapiens, GI208609993, Length=104, Percent_Identity=45.1923076923077, Blast_Score=86, Evalue=3e-17, Organism=Escherichia coli, GI1790665, Length=171, Percent_Identity=45.0292397660819, Blast_Score=144, Evalue=1e-35, Organism=Escherichia coli, GI1788077, Length=107, Percent_Identity=49.5327102803738, Blast_Score=100, Evalue=1e-22, Organism=Caenorhabditis elegans, GI17533973, Length=142, Percent_Identity=38.7323943661972, Blast_Score=107, Evalue=9e-24, Organism=Caenorhabditis elegans, GI17553450, Length=115, Percent_Identity=40, Blast_Score=81, Evalue=7e-16, Organism=Caenorhabditis elegans, GI115532676, Length=115, Percent_Identity=40, Blast_Score=81, Evalue=8e-16, Organism=Saccharomyces cerevisiae, GI6320881, Length=170, Percent_Identity=38.2352941176471, Blast_Score=117, Evalue=4e-27, Organism=Saccharomyces cerevisiae, GI6319816, Length=122, Percent_Identity=50.8196721311475, Blast_Score=114, Evalue=2e-26, Organism=Drosophila melanogaster, GI24645799, Length=154, Percent_Identity=40.2597402597403, Blast_Score=105, Evalue=3e-23, Organism=Drosophila melanogaster, GI45553335, Length=143, Percent_Identity=42.6573426573427, Blast_Score=105, Evalue=3e-23, Organism=Drosophila melanogaster, GI21356369, Length=143, Percent_Identity=42.6573426573427, Blast_Score=105, Evalue=3e-23, Organism=Drosophila melanogaster, GI221378664, Length=131, Percent_Identity=44.2748091603053, Blast_Score=103, Evalue=1e-22, Organism=Drosophila melanogaster, GI221378662, Length=138, Percent_Identity=42.7536231884058, Blast_Score=102, Evalue=3e-22, Organism=Drosophila melanogaster, GI24645801, Length=165, Percent_Identity=36.3636363636364, Blast_Score=101, Evalue=8e-22, Organism=Drosophila melanogaster, GI24645804, Length=154, Percent_Identity=38.3116883116883, Blast_Score=101, Evalue=8e-22, Organism=Drosophila melanogaster, GI24664627, Length=151, Percent_Identity=39.0728476821192, Blast_Score=95, Evalue=6e-20, Organism=Drosophila melanogaster, GI45553131, Length=146, Percent_Identity=39.041095890411, Blast_Score=91, Evalue=9e-19, Organism=Drosophila melanogaster, GI24664631, Length=151, Percent_Identity=38.4105960264901, Blast_Score=89, Evalue=4e-18,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002579 - InterPro: IPR011057 - InterPro: IPR002569 [H]
Pfam domain/function: PF01625 PMSR; PF01641 SelR [H]
EC number: =1.8.4.12; =1.8.4.11 [H]
Molecular weight: Translated: 37036; Mature: 37036
Theoretical pI: Translated: 7.35; Mature: 7.35
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.4 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 2.4 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVNNRKTGISVSAALAAVLLGIALFLFYQSGTGSFPFTSKATSIQKETHMTQRPLTPEEE CCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCC RVIVHKGTERPFTGAYYKNTEDGVYHCRRCDAPLFSSKDKFDSGTGWPSFDDAIAGAVKE EEEEECCCCCCCCCCCCCCCCCHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHH VPDTDGRRTEIVCARCGAHLGHVFFNEGMTAKSVRHCVNSISLLFHPDAEAAPVTQKAVF CCCCCCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCEEEECCCCCCCCCHHHHHE AGGCFWGVEYHFSKTKGVLSVTSGYTGGSIENPSYKQVCSGRTGHAEAVEIAFDPRVVSY ECCEEEEEEEEECCCCCEEEEECCCCCCCCCCCCHHHHHCCCCCCCEEEEEEECCCEECH EALAKLFFEIHDPTQLNRQGPDMGTQYRSAVFYSDEEQKKTAEKLIGELKEKGYNVVTTI HHHHHHHHHHCCCHHCCCCCCCCCHHHHHEEEECCHHHHHHHHHHHHHHHHCCCEEEEEE EPAGTFWNAEEYHQDYYRKTGHQPYCHIYQKRF CCCCCCCCHHHHHHHHHHHCCCCCHHHHHHHCC >Mature Secondary Structure MVNNRKTGISVSAALAAVLLGIALFLFYQSGTGSFPFTSKATSIQKETHMTQRPLTPEEE CCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCC RVIVHKGTERPFTGAYYKNTEDGVYHCRRCDAPLFSSKDKFDSGTGWPSFDDAIAGAVKE EEEEECCCCCCCCCCCCCCCCCHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHH VPDTDGRRTEIVCARCGAHLGHVFFNEGMTAKSVRHCVNSISLLFHPDAEAAPVTQKAVF CCCCCCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCEEEECCCCCCCCCHHHHHE AGGCFWGVEYHFSKTKGVLSVTSGYTGGSIENPSYKQVCSGRTGHAEAVEIAFDPRVVSY ECCEEEEEEEEECCCCCEEEEECCCCCCCCCCCCHHHHHCCCCCCCEEEEEEECCCEECH EALAKLFFEIHDPTQLNRQGPDMGTQYRSAVFYSDEEQKKTAEKLIGELKEKGYNVVTTI HHHHHHHHHHCCCHHCCCCCCCCCHHHHHEEEECCHHHHHHHHHHHHHHHHCCCEEEEEE EPAGTFWNAEEYHQDYYRKTGHQPYCHIYQKRF CCCCCCCCHHHHHHHHHHHCCCCCHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9665876 [H]