| Definition | Chlorobium phaeobacteroides DSM 266 chromosome, complete genome. |
|---|---|
| Accession | NC_008639 |
| Length | 3,133,902 |
Click here to switch to the map view.
The map label for this gene is hisC
Identifier: 119357221
GI number: 119357221
Start: 1607871
End: 1608953
Strand: Reverse
Name: hisC
Synonym: Cpha266_1412
Alternate gene names: 119357221
Gene position: 1608953-1607871 (Counterclockwise)
Preceding gene: 119357227
Following gene: 119357220
Centisome position: 51.34
GC content: 49.03
Gene sequence:
>1083_bases ATGAAAAGAGATATACAGGAACTGCTCAATCCCGCATTGCGCGACCTCAAAGCCTATAACGTTGAGGGCGGTCAGCAGGC AGGCATAAAGCTCAACCAGAATGAAAGCCCTTTTGATCTTCCCTTGTGGCTGAAGGAAGAGGTTCTTGAGGCATTTGAAA AGGAGCCATGGAATCGCTATCCCGATATTCTGCCTTTCAGAGGGATGCGTTCCTATGCGAGCTTTGTTGGAGTGCCGGCC GATGCCGTGATGATGAGCAATGGTTCGAACGAGATGCTCTATACCATATTTCTCGCCTGTCTCGGGCCCGGAAAGAAAAT CCTTATTCCTGAGCCATCCTTCTCTCTTTATGAAAAGATTGCCCGGCTGCTTCATACCGAAGTGGTCTTTGTGCCCATGT TGCCGGGGCTTGCGTTTGATGCCGACGCGATTATCCGGAAAGCCGGCGAGGAGCGTGTTGATTTTATTGTGCTCTCAACC CCCAACAATCCTACGGGGATGTCTCTTGCCTCTGAAGAGGTCTGCCGGATTGCGGAAGCGGCGGACGCTCTCGTGCTTGT CGATGAGGCCTATATTGAGTTTTCACGCCAGAAGAGCGTTGTTGCTGAAATTGCTCGTTTGAAAAATCTTATTGTGCTTC GAACCATGTCGAAAGCACTTGCTCTTGCCGGCATGCGCATAGGCTTCGCTATAGCTGATCCGGCTTTGATGGCTGAGATA GCAAAACCGAAAATTCCCTTTGCTTCGAGCAGACTTTCTGAAATCACCTTGCAGCGGGTACTTGCCAACTATTATCTGGT GACCGATGCTGTTTCCTATATTCTCCATGAACGTGAACGGCTTTCGACCGAACTGAAGGGGATCGGTGGAGTTGAGCTTT ATGAAAGCGATACCAATTTTATTATAATCAGGGTGCGTCATGCTCATGAGTTGTTCTGTGAGCTGAGTCGTCGGGACATT CTTGTCAGGGATGTATCCGGATATCCTCTTATGGAGAACTGTCTTCGTTTCAATATCGGGCTCAGGGATGAAAACGATGC TTTGCTTCAGCAACTCAGGCTTTTATGCGATGAGCCAGTTTAG
Upstream 100 bases:
>100_bases TGAAAAAAGATGTTTTTTTATCTGAACTCATTCTGTCATCGCGTTACAATAGGTTATCTTCTTTCCGAACCGGTGTTCAA AAAAACAGTAACGTTATTCT
Downstream 100 bases:
>100_bases AAAGCTGTCAGGACTGGAGATGAACCGGTTGGACGCGAAGAGCGTTTTTGATGTACCAAGGCATCCGGTTACTCTTATGC TCGATAATATCCGAAGCATG
Product: histidinol phosphate aminotransferase
Products: NA
Alternate protein names: Imidazole acetol-phosphate transaminase
Number of amino acids: Translated: 360; Mature: 360
Protein sequence:
>360_residues MKRDIQELLNPALRDLKAYNVEGGQQAGIKLNQNESPFDLPLWLKEEVLEAFEKEPWNRYPDILPFRGMRSYASFVGVPA DAVMMSNGSNEMLYTIFLACLGPGKKILIPEPSFSLYEKIARLLHTEVVFVPMLPGLAFDADAIIRKAGEERVDFIVLST PNNPTGMSLASEEVCRIAEAADALVLVDEAYIEFSRQKSVVAEIARLKNLIVLRTMSKALALAGMRIGFAIADPALMAEI AKPKIPFASSRLSEITLQRVLANYYLVTDAVSYILHERERLSTELKGIGGVELYESDTNFIIIRVRHAHELFCELSRRDI LVRDVSGYPLMENCLRFNIGLRDENDALLQQLRLLCDEPV
Sequences:
>Translated_360_residues MKRDIQELLNPALRDLKAYNVEGGQQAGIKLNQNESPFDLPLWLKEEVLEAFEKEPWNRYPDILPFRGMRSYASFVGVPA DAVMMSNGSNEMLYTIFLACLGPGKKILIPEPSFSLYEKIARLLHTEVVFVPMLPGLAFDADAIIRKAGEERVDFIVLST PNNPTGMSLASEEVCRIAEAADALVLVDEAYIEFSRQKSVVAEIARLKNLIVLRTMSKALALAGMRIGFAIADPALMAEI AKPKIPFASSRLSEITLQRVLANYYLVTDAVSYILHERERLSTELKGIGGVELYESDTNFIIIRVRHAHELFCELSRRDI LVRDVSGYPLMENCLRFNIGLRDENDALLQQLRLLCDEPV >Mature_360_residues MKRDIQELLNPALRDLKAYNVEGGQQAGIKLNQNESPFDLPLWLKEEVLEAFEKEPWNRYPDILPFRGMRSYASFVGVPA DAVMMSNGSNEMLYTIFLACLGPGKKILIPEPSFSLYEKIARLLHTEVVFVPMLPGLAFDADAIIRKAGEERVDFIVLST PNNPTGMSLASEEVCRIAEAADALVLVDEAYIEFSRQKSVVAEIARLKNLIVLRTMSKALALAGMRIGFAIADPALMAEI AKPKIPFASSRLSEITLQRVLANYYLVTDAVSYILHERERLSTELKGIGGVELYESDTNFIIIRVRHAHELFCELSRRDI LVRDVSGYPLMENCLRFNIGLRDENDALLQQLRLLCDEPV
Specific function: Histidine biosynthesis; seventh step. [C]
COG id: COG0079
COG function: function code E; Histidinol-phosphate/aromatic aminotransferase and cobyric acid decarboxylase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the class-II pyridoxal-phosphate-dependent aminotransferase family. Histidinol-phosphate aminotransferase subfamily
Homologues:
Organism=Escherichia coli, GI1788332, Length=357, Percent_Identity=31.3725490196078, Blast_Score=161, Evalue=6e-41, Organism=Escherichia coli, GI1788722, Length=175, Percent_Identity=27.4285714285714, Blast_Score=64, Evalue=1e-11, Organism=Caenorhabditis elegans, GI17567369, Length=212, Percent_Identity=27.3584905660377, Blast_Score=67, Evalue=2e-11, Organism=Saccharomyces cerevisiae, GI6322075, Length=385, Percent_Identity=28.5714285714286, Blast_Score=117, Evalue=4e-27,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): HIS8_CHLPD (A1BGB4)
Other databases:
- EMBL: CP000492 - RefSeq: YP_911865.1 - ProteinModelPortal: A1BGB4 - SMR: A1BGB4 - STRING: A1BGB4 - GeneID: 4568497 - GenomeReviews: CP000492_GR - KEGG: cph:Cpha266_1412 - NMPDR: fig|290317.7.peg.1491 - eggNOG: COG0079 - HOGENOM: HBG646350 - OMA: ILHERER - ProtClustDB: CLSK637673 - HAMAP: MF_01023 - InterPro: IPR001917 - InterPro: IPR004839 - InterPro: IPR005861 - InterPro: IPR015424 - InterPro: IPR015421 - InterPro: IPR015422 - Gene3D: G3DSA:3.40.640.10 - Gene3D: G3DSA:3.90.1150.10 - TIGRFAMs: TIGR01141
Pfam domain/function: PF00155 Aminotran_1_2; SSF53383 PyrdxlP-dep_Trfase_major
EC number: =2.6.1.9
Molecular weight: Translated: 40449; Mature: 40449
Theoretical pI: Translated: 4.90; Mature: 4.90
Prosite motif: PS00599 AA_TRANSFER_CLASS_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 3.1 %Met (Translated Protein) 4.4 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 3.1 %Met (Mature Protein) 4.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKRDIQELLNPALRDLKAYNVEGGQQAGIKLNQNESPFDLPLWLKEEVLEAFEKEPWNRY CCCHHHHHHHHHHHHHHHCCCCCCCCCCEEECCCCCCCCCCHHHHHHHHHHHHCCCCCCC PDILPFRGMRSYASFVGVPADAVMMSNGSNEMLYTIFLACLGPGKKILIPEPSFSLYEKI CCCCCCCCHHHHHHHHCCCCHHEEECCCCCHHHHHHHHHHCCCCCEEEECCCCHHHHHHH ARLLHTEVVFVPMLPGLAFDADAIIRKAGEERVDFIVLSTPNNPTGMSLASEEVCRIAEA HHHHHHHHHEEECCCCCCCCHHHHHHHCCCCCEEEEEEECCCCCCCCCHHHHHHHHHHHH ADALVLVDEAYIEFSRQKSVVAEIARLKNLIVLRTMSKALALAGMRIGFAIADPALMAEI CCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHH AKPKIPFASSRLSEITLQRVLANYYLVTDAVSYILHERERLSTELKGIGGVELYESDTNF HCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCE IIIRVRHAHELFCELSRRDILVRDVSGYPLMENCLRFNIGLRDENDALLQQLRLLCDEPV EEEEECCHHHHHHHHHCCCEEEEECCCCCHHHHHHHHCCCCCCCCHHHHHHHHHHHCCCC >Mature Secondary Structure MKRDIQELLNPALRDLKAYNVEGGQQAGIKLNQNESPFDLPLWLKEEVLEAFEKEPWNRY CCCHHHHHHHHHHHHHHHCCCCCCCCCCEEECCCCCCCCCCHHHHHHHHHHHHCCCCCCC PDILPFRGMRSYASFVGVPADAVMMSNGSNEMLYTIFLACLGPGKKILIPEPSFSLYEKI CCCCCCCCHHHHHHHHCCCCHHEEECCCCCHHHHHHHHHHCCCCCEEEECCCCHHHHHHH ARLLHTEVVFVPMLPGLAFDADAIIRKAGEERVDFIVLSTPNNPTGMSLASEEVCRIAEA HHHHHHHHHEEECCCCCCCCHHHHHHHCCCCCEEEEEEECCCCCCCCCHHHHHHHHHHHH ADALVLVDEAYIEFSRQKSVVAEIARLKNLIVLRTMSKALALAGMRIGFAIADPALMAEI CCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHH AKPKIPFASSRLSEITLQRVLANYYLVTDAVSYILHERERLSTELKGIGGVELYESDTNF HCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCE IIIRVRHAHELFCELSRRDILVRDVSGYPLMENCLRFNIGLRDENDALLQQLRLLCDEPV EEEEECCHHHHHHHHHCCCEEEEECCCCCHHHHHHHHCCCCCCCCHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA