| Definition | Chlorobium phaeobacteroides DSM 266 chromosome, complete genome. |
|---|---|
| Accession | NC_008639 |
| Length | 3,133,902 |
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The map label for this gene is 119357186
Identifier: 119357186
GI number: 119357186
Start: 1573971
End: 1574195
Strand: Reverse
Name: 119357186
Synonym: Cpha266_1377
Alternate gene names: NA
Gene position: 1574195-1573971 (Counterclockwise)
Preceding gene: 119357199
Following gene: 119357185
Centisome position: 50.23
GC content: 53.33
Gene sequence:
>225_bases ATGATCGGCATCCGCATTCCGAAAAGTGTTGGCGAGCGGCTTGATAATCTTGCCAAAAGAACCGGTCGTACCAGGACCTG GTACATCCGCGAGGCCATTATGGAGCATCTCGACGATCTTGAAGATATCTATCTGGCCGAACAGGTTCTGGAGCGGGTGA GACGTGGTGAAGAGCCGGTGACCGGCATAGATGAAGTGGAGCGTCGTCTTGGTCTGGAAGATTGA
Upstream 100 bases:
>100_bases CGGGGGATTTATTTGGGGTTCCTGTTTGTTTTGTATAACATGTATTGCGTTGAATAACATGTTATACGAGGTAACTATGG AAAAAGAGAAAGCGGATCGG
Downstream 100 bases:
>100_bases GTTTGCCTCATCGGCTGAAAAAGAGCTGGCCAGGCTGGATAAGTCCGCTGCCAGACGGATTGTCAAATACCTCCGTGAAC GGGTTGCGATAGACCCGCGG
Product: CopG family transcriptional regulator
Products: NA
Alternate protein names: Anti-xin-Like Protein; RelB Protein; Addiction Module Antitoxin; Plasmid Stabilisation-Like Protein; Anti-xin Protein; Antitoxin
Number of amino acids: Translated: 74; Mature: 74
Protein sequence:
>74_residues MIGIRIPKSVGERLDNLAKRTGRTRTWYIREAIMEHLDDLEDIYLAEQVLERVRRGEEPVTGIDEVERRLGLED
Sequences:
>Translated_74_residues MIGIRIPKSVGERLDNLAKRTGRTRTWYIREAIMEHLDDLEDIYLAEQVLERVRRGEEPVTGIDEVERRLGLED >Mature_74_residues MIGIRIPKSVGERLDNLAKRTGRTRTWYIREAIMEHLDDLEDIYLAEQVLERVRRGEEPVTGIDEVERRLGLED
Specific function: Unknown
COG id: COG4710
COG function: function code R; Predicted DNA-binding protein with an HTH domain
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 8692; Mature: 8692
Theoretical pI: Translated: 4.71; Mature: 4.71
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIGIRIPKSVGERLDNLAKRTGRTRTWYIREAIMEHLDDLEDIYLAEQVLERVRRGEEPV CCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC TGIDEVERRLGLED CCHHHHHHHCCCCC >Mature Secondary Structure MIGIRIPKSVGERLDNLAKRTGRTRTWYIREAIMEHLDDLEDIYLAEQVLERVRRGEEPV CCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC TGIDEVERRLGLED CCHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA