| Definition | Chlorobium phaeobacteroides DSM 266 chromosome, complete genome. |
|---|---|
| Accession | NC_008639 |
| Length | 3,133,902 |
Click here to switch to the map view.
The map label for this gene is 119357185
Identifier: 119357185
GI number: 119357185
Start: 1573727
End: 1573987
Strand: Reverse
Name: 119357185
Synonym: Cpha266_1376
Alternate gene names: NA
Gene position: 1573987-1573727 (Counterclockwise)
Preceding gene: 119357186
Following gene: 119357183
Centisome position: 50.22
GC content: 52.11
Gene sequence:
>261_bases TTGGTCTGGAAGATTGAGTTTGCCTCATCGGCTGAAAAAGAGCTGGCCAGGCTGGATAAGTCCGCTGCCAGACGGATTGT CAAATACCTCCGTGAACGGGTTGCGATAGACCCGCGGGCTTCCGGCAAATCATTACGAGGCGATCATGCCGGGTTGTGGC GATACCGTATCGGAGATTATCGGGTGATTTGCGAAATCCTCGATGAAAAAGTTTCAGTTCTTGTTGTCCGGGTCGGGCAT CGGAAAGAGGTTTACCGGTAA
Upstream 100 bases:
>100_bases CTCGACGATCTTGAAGATATCTATCTGGCCGAACAGGTTCTGGAGCGGGTGAGACGTGGTGAAGAGCCGGTGACCGGCAT AGATGAAGTGGAGCGTCGTC
Downstream 100 bases:
>100_bases TATTGTCATACACTGTTTACGTTTGCATGCGGCAAGTAAGGGCGTGTTAGTAAATGAGGTAAGCAATGGATTCATTTCCT CTCTTTCATATGGACATGCT
Product: addiction module antitoxin
Products: NA
Alternate protein names: Plasmid Addiction System Poison Protein; Plasmid Stabilization System Protein; Addiction Module Antitoxin; Xin-Like Protein; Xin-Antitoxin System Toxin Component RelE Family; Plasmid Stabilization System; Plasmid Stabilisation System Protein; Plasmid Addiction System xin Protein; Addiction Module xin RelE/StbE; RelE-Domain-Containing Protein; RelE Protein; Plasmid Stabilization System Family Protein; RelE/StbE Family Addiction Module xin
Number of amino acids: Translated: 86; Mature: 86
Protein sequence:
>86_residues MVWKIEFASSAEKELARLDKSAARRIVKYLRERVAIDPRASGKSLRGDHAGLWRYRIGDYRVICEILDEKVSVLVVRVGH RKEVYR
Sequences:
>Translated_86_residues MVWKIEFASSAEKELARLDKSAARRIVKYLRERVAIDPRASGKSLRGDHAGLWRYRIGDYRVICEILDEKVSVLVVRVGH RKEVYR >Mature_86_residues MVWKIEFASSAEKELARLDKSAARRIVKYLRERVAIDPRASGKSLRGDHAGLWRYRIGDYRVICEILDEKVSVLVVRVGH RKEVYR
Specific function: Unknown
COG id: COG2026
COG function: function code JD; Cytotoxic translational repressor of toxin-antitoxin stability system
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 10042; Mature: 10042
Theoretical pI: Translated: 10.62; Mature: 10.62
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVWKIEFASSAEKELARLDKSAARRIVKYLRERVAIDPRASGKSLRGDHAGLWRYRIGDY CEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEEECCCH RVICEILDEKVSVLVVRVGHRKEVYR HHHHHHHHHHHHEEEEECCCCCCCCC >Mature Secondary Structure MVWKIEFASSAEKELARLDKSAARRIVKYLRERVAIDPRASGKSLRGDHAGLWRYRIGDY CEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEEECCCH RVICEILDEKVSVLVVRVGHRKEVYR HHHHHHHHHHHHEEEEECCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA