| Definition | Chlorobium phaeobacteroides DSM 266 chromosome, complete genome. |
|---|---|
| Accession | NC_008639 |
| Length | 3,133,902 |
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The map label for this gene is 119357161
Identifier: 119357161
GI number: 119357161
Start: 1544216
End: 1544659
Strand: Reverse
Name: 119357161
Synonym: Cpha266_1350
Alternate gene names: NA
Gene position: 1544659-1544216 (Counterclockwise)
Preceding gene: 119357162
Following gene: 119357159
Centisome position: 49.29
GC content: 47.3
Gene sequence:
>444_bases ATGCGAAGTGTTTCGTTTCTGATTGTTGTTTTGTTGCTGCATGGCAATCCGCTTCAGGCTGAGGAGTATCGGAATGTCGA AGTGAAAAAGATTGTTACCTCGACAAAAGCGAGCAATGGGCAGCGTCTTTCTTATCTTCGTTCAAAACATCCGGAAGTTA CCGTGCTTGTCGTTACCGTTCCGCCTGGGGGGTCTACCGGCTGGCACAAGCATCCCGTGCCTGTTTATGCATACATGCTG GACGGAGAGCTTTCTGTTGAGATGAAAAATGGCAGCAAGTATAAGTTCAAAAAAGGTGATGCTATTCTTGAGGTGGTGAA CACGTTCCATAATGGTTACAATTCAGGCCGTGTTCCTGCAAGCCTGGTTGTTTTTTATACCGGAGCGGTTGGAATTCCGA ATGTTGTCAAGGAACATGCAGCAGAAACCCCGGCTTTGCCGTAA
Upstream 100 bases:
>100_bases TCGGGGTGATTTGTGCTGATACGTTTTTTTGTTGTGGAGAAGAATTGATAATCTCAATGTGGTTGTTTTTTTTTCAACGT TTAGAGAAACAGGGGGTGGA
Downstream 100 bases:
>100_bases GTAATTATTCAGGAAGGCGACGGCCGCGAGTTGTATGAAAAGGAGGGGGGGAGCGAATTATGTGCTGCGTGTTCAGTCAG GAACCGGGAATCGGGAATTT
Product: cupin 2 domain-containing protein
Products: NA
Alternate protein names: Cupin 2 Domain-Containing Protein; Cupin 2 Conserved Barrel Domain-Containing Protein; Cupin Domain-Containing Protein
Number of amino acids: Translated: 147; Mature: 147
Protein sequence:
>147_residues MRSVSFLIVVLLLHGNPLQAEEYRNVEVKKIVTSTKASNGQRLSYLRSKHPEVTVLVVTVPPGGSTGWHKHPVPVYAYML DGELSVEMKNGSKYKFKKGDAILEVVNTFHNGYNSGRVPASLVVFYTGAVGIPNVVKEHAAETPALP
Sequences:
>Translated_147_residues MRSVSFLIVVLLLHGNPLQAEEYRNVEVKKIVTSTKASNGQRLSYLRSKHPEVTVLVVTVPPGGSTGWHKHPVPVYAYML DGELSVEMKNGSKYKFKKGDAILEVVNTFHNGYNSGRVPASLVVFYTGAVGIPNVVKEHAAETPALP >Mature_147_residues MRSVSFLIVVLLLHGNPLQAEEYRNVEVKKIVTSTKASNGQRLSYLRSKHPEVTVLVVTVPPGGSTGWHKHPVPVYAYML DGELSVEMKNGSKYKFKKGDAILEVVNTFHNGYNSGRVPASLVVFYTGAVGIPNVVKEHAAETPALP
Specific function: Unknown
COG id: COG1917
COG function: function code S; Uncharacterized conserved protein, contains double-stranded beta-helix domain
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 16071; Mature: 16071
Theoretical pI: Translated: 9.92; Mature: 9.92
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 2.0 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 2.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRSVSFLIVVLLLHGNPLQAEEYRNVEVKKIVTSTKASNGQRLSYLRSKHPEVTVLVVTV CCHHHHHHHHHHHCCCCCCHHHHCCCHHHHHHHHCCCCCCCCHHHHHHCCCCEEEEEEEE PPGGSTGWHKHPVPVYAYMLDGELSVEMKNGSKYKFKKGDAILEVVNTFHNGYNSGRVPA CCCCCCCCCCCCCCEEEEEECCEEEEEECCCCEEEEECCHHHHHHHHHHHCCCCCCCCCE SLVVFYTGAVGIPNVVKEHAAETPALP EEEEEEECCCCCHHHHHHHHCCCCCCC >Mature Secondary Structure MRSVSFLIVVLLLHGNPLQAEEYRNVEVKKIVTSTKASNGQRLSYLRSKHPEVTVLVVTV CCHHHHHHHHHHHCCCCCCHHHHCCCHHHHHHHHCCCCCCCCHHHHHHCCCCEEEEEEEE PPGGSTGWHKHPVPVYAYMLDGELSVEMKNGSKYKFKKGDAILEVVNTFHNGYNSGRVPA CCCCCCCCCCCCCCEEEEEECCEEEEEECCCCEEEEECCHHHHHHHHHHHCCCCCCCCCE SLVVFYTGAVGIPNVVKEHAAETPALP EEEEEEECCCCCHHHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA